RNA–Protein interactions for RNA: ENST00000639244.1

SCN3A-209, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

TSL 5 BASIC

Gene SCN3A, Length 8,854 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-209ENST00000639244 PPIAL4GP0DN37 164 aa3.83□□□□□ -1.8
SCN3A-209ENST00000639244 GJA4P35212 333 aa3.83□□□□□ -1.8
SCN3A-209ENST00000639244 NSG1P42857 185 aa3.83□□□□□ -1.8
SCN3A-209ENST00000639244 MVDP53602 400 aa3.83□□□□□ -1.8
SCN3A-209ENST00000639244 GNG5P63218 68 aa3.83□□□□□ -1.8
SCN3A-209ENST00000639244 DCAF12L2Q5VW00 463 aa3.83□□□□□ -1.8
SCN3A-209ENST00000639244 DOK3Q7L591 496 aa3.83□□□□□ -1.8
SCN3A-209ENST00000639244 MARCH9Q86YJ5 346 aa3.83□□□□□ -1.8
SCN3A-209ENST00000639244 TEX29Q8N6K0 151 aa3.83□□□□□ -1.8
SCN3A-209ENST00000639244 ZNF709Q8N972 641 aa3.83□□□□□ -1.8
SCN3A-209ENST00000639244 CADM4Q8NFZ8 388 aa3.83□□□□□ -1.8
SCN3A-209ENST00000639244 ABHD5Q8WTS1 349 aa3.83□□□□□ -1.8
SCN3A-209ENST00000639244 FLYWCH2Q96CP2 140 aaKnown RBP3.83□□□□□ -1.8
SCN3A-209ENST00000639244 SNRNP25Q9BV90 132 aaKnown RBP3.83□□□□□ -1.8
SCN3A-209ENST00000639244 PHF7Q9BWX1 381 aaPredicted RBP3.83□□□□□ -1.8
SCN3A-209ENST00000639244 SMDT1Q9H4I9 107 aa3.83□□□□□ -1.8
SCN3A-209ENST00000639244 NLRC5Q86WI3 1866 aa3.83□□□□□ -1.8
SCN3A-209ENST00000639244 A0A1W2PPE3 182 aa3.83□□□□□ -1.8
SCN3A-209ENST00000639244 F5H5P2 479 aa3.83□□□□□ -1.8
SCN3A-209ENST00000639244 GABRPO00591 440 aa3.83□□□□□ -1.8
SCN3A-209ENST00000639244 AGPAT2O15120 278 aa3.83□□□□□ -1.8
SCN3A-209ENST00000639244 OR7C1O76099 320 aaPredicted RBP3.83□□□□□ -1.8
SCN3A-209ENST00000639244 BCKDHAP12694 445 aa3.83□□□□□ -1.8
SCN3A-209ENST00000639244 CXCL3P19876 107 aa3.83□□□□□ -1.8
SCN3A-209ENST00000639244 PDX1P52945 283 aa3.83□□□□□ -1.8
SCN3A-209ENST00000639244 MALLQ13021 153 aa3.83□□□□□ -1.8
SCN3A-209ENST00000639244 MEF2DQ14814 521 aa3.83□□□□□ -1.8
SCN3A-209ENST00000639244 SLC27A1Q6PCB7 646 aa3.83□□□□□ -1.8
SCN3A-209ENST00000639244 DUX4L9Q6RFH8 374 aaPredicted RBP3.83□□□□□ -1.8
SCN3A-209ENST00000639244 HEPN1Q6WQI6 88 aa3.83□□□□□ -1.8
SCN3A-209ENST00000639244 Q6ZSR9 355 aa3.83□□□□□ -1.8
SCN3A-209ENST00000639244 OR4L1Q8NH43 312 aa3.83□□□□□ -1.8
SCN3A-209ENST00000639244 PTPMT1Q8WUK0 201 aaPredicted RBP3.83□□□□□ -1.8
SCN3A-209ENST00000639244 NUDT8Q8WV74 236 aa3.83□□□□□ -1.8
SCN3A-209ENST00000639244 PNPLA2Q96AD5 504 aa3.83□□□□□ -1.8
SCN3A-209ENST00000639244 WDR34Q96EX3 536 aa3.83□□□□□ -1.8
SCN3A-209ENST00000639244 OR6C1Q96RD1 312 aa3.83□□□□□ -1.8
SCN3A-209ENST00000639244 TBC1D17Q9HA65 648 aa3.83□□□□□ -1.8
SCN3A-209ENST00000639244 SIGLEC7Q9Y286 467 aa3.83□□□□□ -1.8
SCN3A-209ENST00000639244 PRR36Q9H6K5 1346 aa3.83□□□□□ -1.8
SCN3A-209ENST00000639244 F5H5K5 113 aa3.83□□□□□ -1.8
SCN3A-209ENST00000639244 F5H6K3 240 aa3.83□□□□□ -1.8
SCN3A-209ENST00000639244 ACOT8O14734 319 aa3.83□□□□□ -1.8
SCN3A-209ENST00000639244 TMEM253P0C7T8 217 aa3.83□□□□□ -1.8
SCN3A-209ENST00000639244 LAMP1P11279 417 aa3.83□□□□□ -1.8
SCN3A-209ENST00000639244 MIPP30301 263 aa3.83□□□□□ -1.8
SCN3A-209ENST00000639244 FZD5Q13467 585 aa3.83□□□□□ -1.8
SCN3A-209ENST00000639244 ENDOGQ14249 297 aaKnown RBP3.83□□□□□ -1.8
SCN3A-209ENST00000639244 MS4A18Q3C1V0 323 aa3.83□□□□□ -1.8
SCN3A-209ENST00000639244 MRPL54Q6P161 138 aaKnown RBP3.83□□□□□ -1.8
SCN3A-209ENST00000639244 ZNF343Q6P1L6 599 aa3.83□□□□□ -1.8
SCN3A-209ENST00000639244 ZCCHC23Q6ZST2 131 aa3.83□□□□□ -1.8
SCN3A-209ENST00000639244 ANKRD33Q7Z3H0 272 aa3.83□□□□□ -1.8
SCN3A-209ENST00000639244 OR11H7Q8NGC8 314 aa3.83□□□□□ -1.8
SCN3A-209ENST00000639244 OR52I2Q8NH67 350 aa3.83□□□□□ -1.8
SCN3A-209ENST00000639244 DPY30Q9C005 99 aa3.83□□□□□ -1.8
SCN3A-209ENST00000639244 GPR27Q9NS67 375 aa3.83□□□□□ -1.8
SCN3A-209ENST00000639244 SLC45A2Q9UMX9 530 aa3.83□□□□□ -1.8
SCN3A-209ENST00000639244 TNS3Q68CZ2 1445 aa3.83□□□□□ -1.8
SCN3A-209ENST00000639244 PRSS37A4D1T9 235 aa3.83□□□□□ -1.8
SCN3A-209ENST00000639244 CT45A10P0DMU9 189 aa3.83□□□□□ -1.8
SCN3A-209ENST00000639244 B4GALT1P15291 398 aa3.83□□□□□ -1.8
SCN3A-209ENST00000639244 ITGB7P26010 798 aa3.83□□□□□ -1.8
SCN3A-209ENST00000639244 SRP14P37108 136 aaKnown RBP3.83□□□□□ -1.8
SCN3A-209ENST00000639244 CDK5R2Q13319 367 aa3.83□□□□□ -1.8
SCN3A-209ENST00000639244 TRIM40Q6P9F5 258 aa3.83□□□□□ -1.8
SCN3A-209ENST00000639244 TEX38Q6PEX7 206 aa3.83□□□□□ -1.8
SCN3A-209ENST00000639244 PRICKLE2Q7Z3G6 844 aa3.83□□□□□ -1.8
SCN3A-209ENST00000639244 B3GNT8Q7Z7M8 397 aa3.83□□□□□ -1.8
SCN3A-209ENST00000639244 MSI2Q96DH6 328 aaKnown RBP3.83□□□□□ -1.8
SCN3A-209ENST00000639244 NSUN5Q96P11 429 aaKnown RBP3.83□□□□□ -1.8
SCN3A-209ENST00000639244 TBX15Q96SF7 602 aa3.83□□□□□ -1.8
SCN3A-209ENST00000639244 TAPBPLQ9BX59 468 aa3.83□□□□□ -1.8
SCN3A-209ENST00000639244 A4GALTQ9NPC4 353 aa3.83□□□□□ -1.8
SCN3A-209ENST00000639244 ACSS2Q9NR19 701 aa3.83□□□□□ -1.8
SCN3A-209ENST00000639244 CYSLTR1Q9Y271 337 aa3.83□□□□□ -1.8
SCN3A-209ENST00000639244 MADDQ8WXG6 1647 aa3.83□□□□□ -1.8
SCN3A-209ENST00000639244 C10orf71Q711Q0 1435 aa3.83□□□□□ -1.8
SCN3A-209ENST00000639244 VWDEQ8N2E2 1590 aa3.83□□□□□ -1.8
SCN3A-209ENST00000639244 BCL9LQ86UU0 1499 aa3.83□□□□□ -1.8
SCN3A-209ENST00000639244 PRR19A6NJB7 356 aa3.83□□□□□ -1.8
SCN3A-209ENST00000639244 FIGNL2A6NMB9 653 aa3.83□□□□□ -1.8
SCN3A-209ENST00000639244 ALOX5APP20292 161 aa3.83□□□□□ -1.8
SCN3A-209ENST00000639244 HTR1EP28566 365 aa3.83□□□□□ -1.8
SCN3A-209ENST00000639244 RPL12P30050 165 aaKnown RBP3.83□□□□□ -1.8
SCN3A-209ENST00000639244 CX3CR1P49238 355 aa3.83□□□□□ -1.8
SCN3A-209ENST00000639244 C3orf36Q3SXR2 165 aa3.83□□□□□ -1.8
SCN3A-209ENST00000639244 EPGNQ6UW88 154 aa3.83□□□□□ -1.8
SCN3A-209ENST00000639244 GPR146Q96CH1 333 aa3.83□□□□□ -1.8
SCN3A-209ENST00000639244 LOXL4Q96JB6 756 aa3.83□□□□□ -1.8
SCN3A-209ENST00000639244 DNAJC30Q96LL9 226 aa3.83□□□□□ -1.8
SCN3A-209ENST00000639244 UHRF2Q96PU4 802 aa3.83□□□□□ -1.8
SCN3A-209ENST00000639244 CHST8Q9H2A9 424 aa3.83□□□□□ -1.8
SCN3A-209ENST00000639244 CALHM2Q9HA72 323 aa3.83□□□□□ -1.8
SCN3A-209ENST00000639244 A0A087WV48 116 aa3.83□□□□□ -1.8
SCN3A-209ENST00000639244 APOC4-APOC2K7ER74 178 aa3.83□□□□□ -1.8
SCN3A-209ENST00000639244 NKX2-8O15522 239 aa3.83□□□□□ -1.8
SCN3A-209ENST00000639244 CHRM4P08173 479 aa3.83□□□□□ -1.8
SCN3A-209ENST00000639244 CD14P08571 375 aa3.83□□□□□ -1.8
SCN3A-209ENST00000639244 PGA3P0DJD8 388 aa3.83□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms