RNA–Protein interactions for RNA: ENST00000638680.1

SCARB2-213, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 5,817 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-213ENST00000638680 CEACAM6P40199 344 aa16.5■□□□□ 0.23
SCARB2-213ENST00000638680 C8orf82Q6P1X6 216 aaPredicted RBP16.5■□□□□ 0.23
SCARB2-213ENST00000638680 TP53I13Q8NBR0 393 aaPredicted RBP16.5■□□□□ 0.23
SCARB2-213ENST00000638680 ZNF426Q9BUY5 554 aa16.5■□□□□ 0.23
SCARB2-213ENST00000638680 ERRFI1Q9UJM3 462 aaPredicted RBP16.5■□□□□ 0.23
SCARB2-213ENST00000638680 GOLT1BQ9Y3E0 138 aa16.5■□□□□ 0.23
SCARB2-213ENST00000638680 AHDC1Q5TGY3 1603 aaPredicted RBP16.5■□□□□ 0.23
SCARB2-213ENST00000638680 SLX4Q8IY92 1834 aa16.5■□□□□ 0.23
SCARB2-213ENST00000638680 TOX4O94842 621 aa16.5■□□□□ 0.23
SCARB2-213ENST00000638680 INHBBP09529 407 aa16.5■□□□□ 0.23
SCARB2-213ENST00000638680 B3GNTL1Q67FW5 361 aaPredicted RBP16.5■□□□□ 0.23
SCARB2-213ENST00000638680 MYPOPQ86VE0 399 aaPredicted RBP16.5■□□□□ 0.23
SCARB2-213ENST00000638680 PLPPR2Q96GM1 343 aa16.5■□□□□ 0.23
SCARB2-213ENST00000638680 TIMD4Q96H15 378 aa16.5■□□□□ 0.23
SCARB2-213ENST00000638680 PRR13Q9NZ81 148 aa16.5■□□□□ 0.23
SCARB2-213ENST00000638680 FAM3AP98173 230 aa16.49■□□□□ 0.23
SCARB2-213ENST00000638680 CLPPQ16740 277 aaPredicted RBP16.49■□□□□ 0.23
SCARB2-213ENST00000638680 SLC22A20A6NK97 555 aa16.49■□□□□ 0.23
SCARB2-213ENST00000638680 RNASEKQ6P5S7 137 aaKnown RBP16.49■□□□□ 0.23
SCARB2-213ENST00000638680 C11orf42Q8N5U0 333 aa16.49■□□□□ 0.23
SCARB2-213ENST00000638680 POM121L2Q96KW2 1035 aa16.49■□□□□ 0.23
SCARB2-213ENST00000638680 NAT8BQ9UHF3 227 aa16.49■□□□□ 0.23
SCARB2-213ENST00000638680 ADAP1O75689 374 aa16.49■□□□□ 0.23
SCARB2-213ENST00000638680 FGF8P55075 233 aaPredicted RBP16.49■□□□□ 0.23
SCARB2-213ENST00000638680 CXorf67Q86X51 503 aaPredicted RBP16.49■□□□□ 0.23
SCARB2-213ENST00000638680 OR4D10Q8NGI6 311 aa16.49■□□□□ 0.23
SCARB2-213ENST00000638680 RAB40CQ96S21 281 aa16.49■□□□□ 0.23
SCARB2-213ENST00000638680 RREB1Q92766 1687 aa16.49■□□□□ 0.23
SCARB2-213ENST00000638680 VASH2Q86V25 355 aa16.49■□□□□ 0.23
SCARB2-213ENST00000638680 BTAF1O14981 1849 aa16.48■□□□□ 0.23
SCARB2-213ENST00000638680 SPTY2D1-AS1A0A0U1RR47 76 aa16.48■□□□□ 0.23
SCARB2-213ENST00000638680 MPZL1O95297 269 aa16.48■□□□□ 0.23
SCARB2-213ENST00000638680 TMEM33P57088 247 aa16.48■□□□□ 0.23
SCARB2-213ENST00000638680 ZXDAP98168 799 aa16.48■□□□□ 0.23
SCARB2-213ENST00000638680 IL13RA2Q14627 380 aa16.48■□□□□ 0.23
SCARB2-213ENST00000638680 OR2C3Q8N628 320 aa16.48■□□□□ 0.23
SCARB2-213ENST00000638680 MS4A10Q96PG2 267 aa16.48■□□□□ 0.23
SCARB2-213ENST00000638680 MRM2Q9UI43 246 aaKnown RBP16.48■□□□□ 0.23
SCARB2-213ENST00000638680 ECM29Q5VYK3 1845 aa16.48■□□□□ 0.23
SCARB2-213ENST00000638680 ALG1L2C9J202 215 aa16.48■□□□□ 0.23
SCARB2-213ENST00000638680 M0R1X1 148 aa16.48■□□□□ 0.23
SCARB2-213ENST00000638680 IGHA1P01876 353 aa16.48■□□□□ 0.23
SCARB2-213ENST00000638680 NCMAPQ5T1S8 102 aa16.48■□□□□ 0.23
SCARB2-213ENST00000638680 FGF14Q92915 247 aa16.48■□□□□ 0.23
SCARB2-213ENST00000638680 PIK3IP1Q96FE7 263 aa16.48■□□□□ 0.23
SCARB2-213ENST00000638680 NTMQ9P121 344 aa16.48■□□□□ 0.23
SCARB2-213ENST00000638680 LPAR3Q9UBY5 353 aa16.48■□□□□ 0.23
SCARB2-213ENST00000638680 KIAA1324LA8MWY0 1029 aaPredicted RBP16.48■□□□□ 0.23
SCARB2-213ENST00000638680 FFAR1O14842 300 aa16.48■□□□□ 0.23
SCARB2-213ENST00000638680 NTN1O95631 604 aa16.48■□□□□ 0.23
SCARB2-213ENST00000638680 IL2RAP01589 272 aa16.48■□□□□ 0.23
SCARB2-213ENST00000638680 GYPAP02724 150 aa16.48■□□□□ 0.23
SCARB2-213ENST00000638680 CBLN2Q8IUK8 224 aa16.48■□□□□ 0.23
SCARB2-213ENST00000638680 MCHR2Q969V1 340 aa16.48■□□□□ 0.23
SCARB2-213ENST00000638680 OR2J3O76001 311 aa16.48■□□□□ 0.23
SCARB2-213ENST00000638680 IGF2P01344 180 aa16.48■□□□□ 0.23
SCARB2-213ENST00000638680 CHRNA7P36544 502 aa16.48■□□□□ 0.23
SCARB2-213ENST00000638680 LPAR6P43657 344 aa16.48■□□□□ 0.23
SCARB2-213ENST00000638680 NHLRC2Q8NBF2 726 aa16.48■□□□□ 0.23
SCARB2-213ENST00000638680 GABRA1P14867 456 aa16.47■□□□□ 0.23
SCARB2-213ENST00000638680 FA2HQ7L5A8 372 aa16.47■□□□□ 0.23
SCARB2-213ENST00000638680 OR4D11Q8NGI4 311 aa16.47■□□□□ 0.23
SCARB2-213ENST00000638680 TMEM230Q96A57 120 aa16.47■□□□□ 0.23
SCARB2-213ENST00000638680 TAAR9Q96RI9 348 aa16.47■□□□□ 0.23
SCARB2-213ENST00000638680 LOXL2Q9Y4K0 774 aa16.47■□□□□ 0.23
SCARB2-213ENST00000638680 KIAA1551Q9HCM1 1747 aa16.47■□□□□ 0.23
SCARB2-213ENST00000638680 TMEM218A2RU14 115 aa16.47■□□□□ 0.23
SCARB2-213ENST00000638680 LILRA5A6NI73 299 aa16.47■□□□□ 0.23
SCARB2-213ENST00000638680 AP4M1O00189 453 aa16.47■□□□□ 0.23
SCARB2-213ENST00000638680 ARG1P05089 322 aa16.47■□□□□ 0.23
SCARB2-213ENST00000638680 HOXC8P31273 242 aa16.47■□□□□ 0.23
SCARB2-213ENST00000638680 AWAT1Q58HT5 328 aa16.47■□□□□ 0.23
SCARB2-213ENST00000638680 WFDC8Q8IUA0 241 aa16.47■□□□□ 0.23
SCARB2-213ENST00000638680 OR4D9Q8NGE8 314 aa16.47■□□□□ 0.23
SCARB2-213ENST00000638680 TRPM3Q9HCF6 1732 aaPredicted RBP16.47■□□□□ 0.23
SCARB2-213ENST00000638680 CXCL10P02778 98 aa16.47■□□□□ 0.23
SCARB2-213ENST00000638680 LGALSLQ3ZCW2 172 aaPredicted RBP16.47■□□□□ 0.23
SCARB2-213ENST00000638680 MMP7P09237 267 aaPredicted RBP16.47■□□□□ 0.23
SCARB2-213ENST00000638680 PWWP2BQ6NUJ5 590 aa16.47■□□□□ 0.23
SCARB2-213ENST00000638680 ACSM6Q6P461 480 aa16.47■□□□□ 0.23
SCARB2-213ENST00000638680 MOGAT1Q96PD6 335 aa16.47■□□□□ 0.23
SCARB2-213ENST00000638680 ADAT1Q9BUB4 502 aaKnown RBP16.47■□□□□ 0.23
SCARB2-213ENST00000638680 PLA2G10O15496 165 aa16.46■□□□□ 0.23
SCARB2-213ENST00000638680 BMP5P22003 454 aa16.46■□□□□ 0.23
SCARB2-213ENST00000638680 DEFB108AA8MXU0 73 aa16.46■□□□□ 0.23
SCARB2-213ENST00000638680 TCAPO15273 167 aa16.46■□□□□ 0.23
SCARB2-213ENST00000638680 C21orf58P58505 322 aa16.46■□□□□ 0.23
SCARB2-213ENST00000638680 HLA-DRB3P79483 266 aa16.46■□□□□ 0.23
SCARB2-213ENST00000638680 TMEM183BQ1AE95 376 aa16.46■□□□□ 0.23
SCARB2-213ENST00000638680 ZNF774Q6NX45 483 aa16.46■□□□□ 0.23
SCARB2-213ENST00000638680 C17orf78Q8N4C9 275 aa16.46■□□□□ 0.23
SCARB2-213ENST00000638680 TRMT61AQ96FX7 289 aaKnown RBP16.46■□□□□ 0.23
SCARB2-213ENST00000638680 SLC25A22Q9H936 323 aa16.46■□□□□ 0.23
SCARB2-213ENST00000638680 CACNG5Q9UF02 275 aa16.46■□□□□ 0.23
SCARB2-213ENST00000638680 RBFOX3A6NFN3 312 aa16.46■□□□□ 0.23
SCARB2-213ENST00000638680 RPL29P47914 159 aaKnown RBP16.46■□□□□ 0.23
SCARB2-213ENST00000638680 ERVS71-1P61550 626 aa16.46■□□□□ 0.23
SCARB2-213ENST00000638680 DEGS2Q6QHC5 323 aa16.46■□□□□ 0.23
SCARB2-213ENST00000638680 ISOC2Q96AB3 205 aa16.46■□□□□ 0.23
SCARB2-213ENST00000638680 SERGEFQ9UGK8 458 aa16.46■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms