RNA–Protein interactions for RNA: ENST00000637329.1

CLN6-219, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 1,204 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-219ENST00000637329 IGHV3-13P01766 116 aa13.11□□□□□ -0.31
CLN6-219ENST00000637329 CSTBP04080 98 aaKnown RBP13.11□□□□□ -0.31
CLN6-219ENST00000637329 MPZP25189 248 aa13.11□□□□□ -0.31
CLN6-219ENST00000637329 INPP1P49441 399 aa13.11□□□□□ -0.31
CLN6-219ENST00000637329 KLF3P57682 345 aaPredicted RBP13.11□□□□□ -0.31
CLN6-219ENST00000637329 SSBP1Q04837 148 aaKnown RBP13.11□□□□□ -0.31
CLN6-219ENST00000637329 MZT1Q08AG7 82 aa13.11□□□□□ -0.31
CLN6-219ENST00000637329 MADCAM1Q13477 382 aa13.11□□□□□ -0.31
CLN6-219ENST00000637329 ARL6IP1Q15041 203 aa13.11□□□□□ -0.31
CLN6-219ENST00000637329 DMRTC1Q5HYR2 192 aa13.11□□□□□ -0.31
CLN6-219ENST00000637329 OR10K2Q6IF99 312 aa13.11□□□□□ -0.31
CLN6-219ENST00000637329 ALKBH2Q6NS38 261 aa13.11□□□□□ -0.31
CLN6-219ENST00000637329 CLEC18BQ6UXF7 455 aa13.11□□□□□ -0.31
CLN6-219ENST00000637329 MKXQ8IYA7 352 aa13.11□□□□□ -0.31
CLN6-219ENST00000637329 IZUMO1Q8IYV9 350 aa13.11□□□□□ -0.31
CLN6-219ENST00000637329 FAM89BQ8N5H3 189 aa13.11□□□□□ -0.31
CLN6-219ENST00000637329 CLEC18CQ8NCF0 446 aa13.11□□□□□ -0.31
CLN6-219ENST00000637329 TMEM104Q8NE00 496 aa13.11□□□□□ -0.31
CLN6-219ENST00000637329 C19orf18Q8NEA5 215 aa13.11□□□□□ -0.31
CLN6-219ENST00000637329 Q8NFD4 153 aa13.11□□□□□ -0.31
CLN6-219ENST00000637329 TMEM171Q8WVE6 324 aa13.11□□□□□ -0.31
CLN6-219ENST00000637329 DEDD2Q8WXF8 326 aa13.11□□□□□ -0.31
CLN6-219ENST00000637329 YIPF5Q969M3 257 aa13.11□□□□□ -0.31
CLN6-219ENST00000637329 RNF170Q96K19 258 aa13.11□□□□□ -0.31
CLN6-219ENST00000637329 THAP7Q9BT49 309 aaPredicted RBP13.11□□□□□ -0.31
CLN6-219ENST00000637329 SCPEP1Q9HB40 452 aa13.11□□□□□ -0.31
CLN6-219ENST00000637329 NKIRAS2Q9NYR9 191 aa13.11□□□□□ -0.31
CLN6-219ENST00000637329 ING4Q9UNL4 249 aa13.11□□□□□ -0.31
CLN6-219ENST00000637329 MRPS7Q9Y2R9 242 aaKnown RBP13.11□□□□□ -0.31
CLN6-219ENST00000637329 NBPF19A0A087WUL8 3843 aa13.1□□□□□ -0.31
CLN6-219ENST00000637329 J3QT63 122 aa13.1□□□□□ -0.31
CLN6-219ENST00000637329 RAB27BO00194 218 aa13.1□□□□□ -0.31
CLN6-219ENST00000637329 AKR7A2O43488 359 aa13.1□□□□□ -0.31
CLN6-219ENST00000637329 GTF2F2P13984 249 aa13.1□□□□□ -0.31
CLN6-219ENST00000637329 SERPINA2P20848 420 aa13.1□□□□□ -0.31
CLN6-219ENST00000637329 GNLYP22749 145 aa13.1□□□□□ -0.31
CLN6-219ENST00000637329 HAAOP46952 286 aa13.1□□□□□ -0.31
CLN6-219ENST00000637329 AP3S2P59780 193 aa13.1□□□□□ -0.31
CLN6-219ENST00000637329 SELENOVP59797 346 aa13.1□□□□□ -0.31
CLN6-219ENST00000637329 DGCR2P98153 550 aa13.1□□□□□ -0.31
CLN6-219ENST00000637329 BSPH1Q075Z2 132 aa13.1□□□□□ -0.31
CLN6-219ENST00000637329 IL24Q13007 206 aa13.1□□□□□ -0.31
CLN6-219ENST00000637329 OR8G1Q15617 311 aa13.1□□□□□ -0.31
CLN6-219ENST00000637329 IGFBP7Q16270 282 aa13.1□□□□□ -0.31
CLN6-219ENST00000637329 FAM76BQ5HYJ3 339 aa13.1□□□□□ -0.31
CLN6-219ENST00000637329 TMEM255AQ5JRV8 349 aa13.1□□□□□ -0.31
CLN6-219ENST00000637329 C1QL2Q7Z5L3 287 aa13.1□□□□□ -0.31
CLN6-219ENST00000637329 CALHM1Q8IU99 346 aa13.1□□□□□ -0.31
CLN6-219ENST00000637329 POC5Q8NA72 575 aa13.1□□□□□ -0.31
CLN6-219ENST00000637329 ACBD4Q8NC06 268 aa13.1□□□□□ -0.31
CLN6-219ENST00000637329 OR10R2Q8NGX6 335 aa13.1□□□□□ -0.31
CLN6-219ENST00000637329 PRR7Q8TB68 274 aa13.1□□□□□ -0.31
CLN6-219ENST00000637329 FCAMRQ8WWV6 532 aa13.1□□□□□ -0.31
CLN6-219ENST00000637329 RADILQ96JH8 1075 aa13.1□□□□□ -0.31
CLN6-219ENST00000637329 Q96M66 194 aa13.1□□□□□ -0.31
CLN6-219ENST00000637329 WFIKKN1Q96NZ8 548 aa13.1□□□□□ -0.31
CLN6-219ENST00000637329 AUNIPQ9H7T9 357 aa13.1□□□□□ -0.31
CLN6-219ENST00000637329 ELL3Q9HB65 397 aaPredicted RBP13.1□□□□□ -0.31
CLN6-219ENST00000637329 TMEM100Q9NV29 134 aa13.1□□□□□ -0.31
CLN6-219ENST00000637329 TBC1D24Q9ULP9 559 aa13.1□□□□□ -0.31
CLN6-219ENST00000637329 POLDIP2Q9Y2S7 368 aa13.1□□□□□ -0.31
CLN6-219ENST00000637329 RBMX2Q9Y388 322 aaKnown RBP13.1□□□□□ -0.31
CLN6-219ENST00000637329 DOPEY1Q5JWR5 2465 aa13.1□□□□□ -0.31
CLN6-219ENST00000637329 RELNP78509 3460 aa13.09□□□□□ -0.31
CLN6-219ENST00000637329 TRAV18A0A075B6X5 111 aa13.09□□□□□ -0.31
CLN6-219ENST00000637329 NKX2-6A6NCS4 301 aa13.09□□□□□ -0.31
CLN6-219ENST00000637329 FAM90A10PA6NDY2 464 aa13.09□□□□□ -0.31
CLN6-219ENST00000637329 FAM90A18PA6NE21 464 aa13.09□□□□□ -0.31
CLN6-219ENST00000637329 FAM90A16PA6NEW6 464 aa13.09□□□□□ -0.31
CLN6-219ENST00000637329 FAM90A20PA6NIJ5 464 aa13.09□□□□□ -0.31
CLN6-219ENST00000637329 FAM90A8PA6NJQ4 464 aa13.09□□□□□ -0.31
CLN6-219ENST00000637329 FAM90A7PA6NKC0 464 aa13.09□□□□□ -0.31
CLN6-219ENST00000637329 FAM90A22PA8MWA6 464 aa13.09□□□□□ -0.31
CLN6-219ENST00000637329 FAM90A12PA8MX19 464 aa13.09□□□□□ -0.31
CLN6-219ENST00000637329 FAM90A5PA8MXJ8 464 aa13.09□□□□□ -0.31
CLN6-219ENST00000637329 FAM90A23PA8MXZ1 464 aa13.09□□□□□ -0.31
CLN6-219ENST00000637329 PRSS44E7EML9 344 aa13.09□□□□□ -0.31
CLN6-219ENST00000637329 ABCD4O14678 606 aa13.09□□□□□ -0.31
CLN6-219ENST00000637329 SPRY1O43609 319 aaPredicted RBP13.09□□□□□ -0.31
CLN6-219ENST00000637329 ECDO95905 644 aaPredicted RBP13.09□□□□□ -0.31
CLN6-219ENST00000637329 GSTP1P09211 210 aaKnown RBP13.09□□□□□ -0.31
CLN6-219ENST00000637329 FAM90A15PP0C7V4 464 aa13.09□□□□□ -0.31
CLN6-219ENST00000637329 FAM90A13PP0C7W8 464 aa13.09□□□□□ -0.31
CLN6-219ENST00000637329 FAM90A14PP0C7W9 464 aa13.09□□□□□ -0.31
CLN6-219ENST00000637329 FAM90A24PP0C7X0 464 aa13.09□□□□□ -0.31
CLN6-219ENST00000637329 FABP6P51161 128 aa13.09□□□□□ -0.31
CLN6-219ENST00000637329 TFF3Q07654 80 aa13.09□□□□□ -0.31
CLN6-219ENST00000637329 OXA1LQ15070 435 aa13.09□□□□□ -0.31
CLN6-219ENST00000637329 TRIM16LQ309B1 348 aa13.09□□□□□ -0.31
CLN6-219ENST00000637329 NHLRC3Q5JS37 347 aa13.09□□□□□ -0.31
CLN6-219ENST00000637329 NCMAPQ5T1S8 102 aa13.09□□□□□ -0.31
CLN6-219ENST00000637329 ELP2Q6IA86 826 aa13.09□□□□□ -0.31
CLN6-219ENST00000637329 SLC25A26Q70HW3 274 aa13.09□□□□□ -0.31
CLN6-219ENST00000637329 Q8IYB0 196 aa13.09□□□□□ -0.31
CLN6-219ENST00000637329 DTX3Q8N9I9 347 aa13.09□□□□□ -0.31
CLN6-219ENST00000637329 OR13G1Q8NGZ3 307 aa13.09□□□□□ -0.31
CLN6-219ENST00000637329 OR51F2Q8NH61 342 aa13.09□□□□□ -0.31
CLN6-219ENST00000637329 AQP3Q92482 292 aa13.09□□□□□ -0.31
CLN6-219ENST00000637329 DVL3Q92997 716 aaPredicted RBP13.09□□□□□ -0.31
CLN6-219ENST00000637329 ZC3HAV1LQ96H79 300 aaKnown RBP13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms