RNA–Protein interactions for RNA: ENST00000628018.2

CAPNS1-215, Transcript of calpain small subunit 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CAPNS1, Length 1,509 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPNS1-215ENST00000628018 OR51I2Q9H344 312 aa21.22■□□□□ 0.99
CAPNS1-215ENST00000628018 DUSP13Q9UII6 198 aa21.22■□□□□ 0.99
CAPNS1-215ENST00000628018 CADP27708 2225 aa21.21■□□□□ 0.99
CAPNS1-215ENST00000628018 CLDN14O95500 239 aa21.21■□□□□ 0.99
CAPNS1-215ENST00000628018 VEGFCP49767 419 aa21.21■□□□□ 0.99
CAPNS1-215ENST00000628018 MRPS10P82664 201 aaKnown RBP21.21■□□□□ 0.99
CAPNS1-215ENST00000628018 DGCR2P98153 550 aa21.21■□□□□ 0.99
CAPNS1-215ENST00000628018 SCN1BQ07699 218 aa21.21■□□□□ 0.99
CAPNS1-215ENST00000628018 WDR86Q86TI4 376 aa21.21■□□□□ 0.99
CAPNS1-215ENST00000628018 TMEM200AQ86VY9 491 aa21.21■□□□□ 0.99
CAPNS1-215ENST00000628018 FAM89BQ8N5H3 189 aa21.21■□□□□ 0.99
CAPNS1-215ENST00000628018 OR13G1Q8NGZ3 307 aa21.21■□□□□ 0.99
CAPNS1-215ENST00000628018 SMIM4Q8WVI0 70 aa21.21■□□□□ 0.99
CAPNS1-215ENST00000628018 YIPF5Q969M3 257 aa21.21■□□□□ 0.99
CAPNS1-215ENST00000628018 TRIM63Q969Q1 353 aa21.21■□□□□ 0.99
CAPNS1-215ENST00000628018 TM2D1Q9BX74 207 aa21.21■□□□□ 0.99
CAPNS1-215ENST00000628018 CA10Q9NS85 328 aa21.21■□□□□ 0.99
CAPNS1-215ENST00000628018 HIVEP3Q5T1R4 2406 aa21.21■□□□□ 0.99
CAPNS1-215ENST00000628018 EPG5Q9HCE0 2579 aa21.21■□□□□ 0.99
CAPNS1-215ENST00000628018 WIPF3A6NGB9 483 aa21.2■□□□□ 0.98
CAPNS1-215ENST00000628018 LANCL1O43813 399 aa21.2■□□□□ 0.98
CAPNS1-215ENST00000628018 HTR3BO95264 441 aa21.2■□□□□ 0.98
CAPNS1-215ENST00000628018 CSTBP04080 98 aaKnown RBP21.2■□□□□ 0.98
CAPNS1-215ENST00000628018 PTHLHP12272 177 aa21.2■□□□□ 0.98
CAPNS1-215ENST00000628018 RGS21Q2M5E4 152 aa21.2■□□□□ 0.98
CAPNS1-215ENST00000628018 TRIQKQ629K1 86 aa21.2■□□□□ 0.98
CAPNS1-215ENST00000628018 ZNF843Q8N446 348 aa21.2■□□□□ 0.98
CAPNS1-215ENST00000628018 GCDHQ92947 438 aaPredicted RBP21.2■□□□□ 0.98
CAPNS1-215ENST00000628018 PKIBQ9C010 78 aa21.2■□□□□ 0.98
CAPNS1-215ENST00000628018 ZNF442Q9H7R0 627 aa21.2■□□□□ 0.98
CAPNS1-215ENST00000628018 DIDO1Q9BTC0 2240 aaKnown RBP21.2■□□□□ 0.98
CAPNS1-215ENST00000628018 TUBAL3A6NHL2 446 aa21.19■□□□□ 0.98
CAPNS1-215ENST00000628018 GABARAPH6UMI1 98 aa21.19■□□□□ 0.98
CAPNS1-215ENST00000628018 SFTPBP07988 381 aa21.19■□□□□ 0.98
CAPNS1-215ENST00000628018 MPZP25189 248 aa21.19■□□□□ 0.98
CAPNS1-215ENST00000628018 HAGHLQ6PII5 290 aaPredicted RBP21.19■□□□□ 0.98
CAPNS1-215ENST00000628018 DNM1P46Q6ZS02 220 aa21.19■□□□□ 0.98
CAPNS1-215ENST00000628018 MKXQ8IYA7 352 aa21.19■□□□□ 0.98
CAPNS1-215ENST00000628018 Q8NFD4 153 aa21.19■□□□□ 0.98
CAPNS1-215ENST00000628018 OR10R2Q8NGX6 335 aa21.19■□□□□ 0.98
CAPNS1-215ENST00000628018 MRPL24Q96A35 216 aaKnown RBP21.19■□□□□ 0.98
CAPNS1-215ENST00000628018 PLPPR2Q96GM1 343 aa21.19■□□□□ 0.98
CAPNS1-215ENST00000628018 MRPL37Q9BZE1 423 aaKnown RBP21.19■□□□□ 0.98
CAPNS1-215ENST00000628018 SELENOIQ9C0D9 397 aa21.19■□□□□ 0.98
CAPNS1-215ENST00000628018 MSL2Q9HCI7 577 aa21.19■□□□□ 0.98
CAPNS1-215ENST00000628018 TBC1D24Q9ULP9 559 aa21.19■□□□□ 0.98
CAPNS1-215ENST00000628018 HCFC1P51610 2035 aa21.19■□□□□ 0.98
CAPNS1-215ENST00000628018 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP21.19■□□□□ 0.98
CAPNS1-215ENST00000628018 LRP5LA4QPB2 252 aa21.19■□□□□ 0.98
CAPNS1-215ENST00000628018 TMEM210A6NLX4 147 aa21.19■□□□□ 0.98
CAPNS1-215ENST00000628018 GTF2F2P13984 249 aa21.19■□□□□ 0.98
CAPNS1-215ENST00000628018 IL24Q13007 206 aa21.19■□□□□ 0.98
CAPNS1-215ENST00000628018 SPERTQ8NA61 448 aa21.19■□□□□ 0.98
CAPNS1-215ENST00000628018 OR10AD1Q8NGE0 317 aa21.19■□□□□ 0.98
CAPNS1-215ENST00000628018 OR56B1Q8NGI3 324 aa21.19■□□□□ 0.98
CAPNS1-215ENST00000628018 OR51T1Q8NGJ9 327 aa21.19■□□□□ 0.98
CAPNS1-215ENST00000628018 MRPS24Q96EL2 167 aaKnown RBP21.19■□□□□ 0.98
CAPNS1-215ENST00000628018 Q96M66 194 aa21.19■□□□□ 0.98
CAPNS1-215ENST00000628018 SYT3Q9BQG1 590 aa21.19■□□□□ 0.98
CAPNS1-215ENST00000628018 AUNIPQ9H7T9 357 aa21.19■□□□□ 0.98
CAPNS1-215ENST00000628018 PCDHB16Q9NRJ7 776 aa21.19■□□□□ 0.98
CAPNS1-215ENST00000628018 ATP23Q9Y6H3 246 aa21.19■□□□□ 0.98
CAPNS1-215ENST00000628018 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP21.18■□□□□ 0.98
CAPNS1-215ENST00000628018 C1QL1O75973 258 aa21.18■□□□□ 0.98
CAPNS1-215ENST00000628018 CD3GP09693 182 aa21.18■□□□□ 0.98
CAPNS1-215ENST00000628018 ZNF260Q3ZCT1 412 aa21.18■□□□□ 0.98
CAPNS1-215ENST00000628018 RNASE12Q5GAN4 147 aaKnown RBP21.18■□□□□ 0.98
CAPNS1-215ENST00000628018 ADAM5Q6NVV9 412 aa21.18■□□□□ 0.98
CAPNS1-215ENST00000628018 DMRTC2Q8IXT2 367 aaPredicted RBP21.18■□□□□ 0.98
CAPNS1-215ENST00000628018 C19orf18Q8NEA5 215 aa21.18■□□□□ 0.98
CAPNS1-215ENST00000628018 OR52I2Q8NH67 350 aa21.18■□□□□ 0.98
CAPNS1-215ENST00000628018 SETD6Q8TBK2 473 aa21.18■□□□□ 0.98
CAPNS1-215ENST00000628018 CXXC4Q9H2H0 198 aa21.18■□□□□ 0.98
CAPNS1-215ENST00000628018 NPDC1Q9NQX5 325 aaPredicted RBP21.18■□□□□ 0.98
CAPNS1-215ENST00000628018 NKIRAS2Q9NYR9 191 aa21.18■□□□□ 0.98
CAPNS1-215ENST00000628018 MTCH1Q9NZJ7 389 aa21.18■□□□□ 0.98
CAPNS1-215ENST00000628018 FOXI3A8MTJ6 420 aaPredicted RBP21.17■□□□□ 0.98
CAPNS1-215ENST00000628018 SHISA9B4DS77 424 aa21.17■□□□□ 0.98
CAPNS1-215ENST00000628018 J3QT63 122 aa21.17■□□□□ 0.98
CAPNS1-215ENST00000628018 SOCS1O15524 211 aa21.17■□□□□ 0.98
CAPNS1-215ENST00000628018 SYNGR1O43759 233 aa21.17■□□□□ 0.98
CAPNS1-215ENST00000628018 CYB5AP00167 134 aa21.17■□□□□ 0.98
CAPNS1-215ENST00000628018 CPT2P23786 658 aa21.17■□□□□ 0.98
CAPNS1-215ENST00000628018 NPBWR2P48146 333 aa21.17■□□□□ 0.98
CAPNS1-215ENST00000628018 TMEM50BP56557 158 aa21.17■□□□□ 0.98
CAPNS1-215ENST00000628018 DEFA1P59665 94 aa21.17■□□□□ 0.98
CAPNS1-215ENST00000628018 DEFA3P59666 94 aa21.17■□□□□ 0.98
CAPNS1-215ENST00000628018 SELENOVP59797 346 aa21.17■□□□□ 0.98
CAPNS1-215ENST00000628018 HACD4Q5VWC8 232 aa21.17■□□□□ 0.98
CAPNS1-215ENST00000628018 ELP2Q6IA86 826 aa21.17■□□□□ 0.98
CAPNS1-215ENST00000628018 OSR2Q8N2R0 312 aa21.17■□□□□ 0.98
CAPNS1-215ENST00000628018 POC5Q8NA72 575 aa21.17■□□□□ 0.98
CAPNS1-215ENST00000628018 FCAMRQ8WWV6 532 aa21.17■□□□□ 0.98
CAPNS1-215ENST00000628018 AQP3Q92482 292 aa21.17■□□□□ 0.98
CAPNS1-215ENST00000628018 SLAMF9Q96A28 289 aa21.17■□□□□ 0.98
CAPNS1-215ENST00000628018 MEIOCA2RUB1 952 aa21.16■□□□□ 0.98
CAPNS1-215ENST00000628018 BCL3P20749 454 aa21.16■□□□□ 0.98
CAPNS1-215ENST00000628018 ZNF154Q13106 437 aa21.16■□□□□ 0.98
CAPNS1-215ENST00000628018 MAB21L1Q13394 359 aa21.16■□□□□ 0.98
CAPNS1-215ENST00000628018 SCCPDHQ8NBX0 429 aa21.16■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms