RNA–Protein interactions for RNA: ENST00000626000.1

SNRPA1-216, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 5 BASIC

Gene SNRPA1, Length 539 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-216ENST00000626000 WDR25Q64LD2 544 aaPredicted RBP11.69□□□□□ -0.54
SNRPA1-216ENST00000626000 SFRP4Q6FHJ7 346 aaPredicted RBP11.69□□□□□ -0.54
SNRPA1-216ENST00000626000 FIP1L1Q6UN15 594 aaKnown RBP11.69□□□□□ -0.54
SNRPA1-216ENST00000626000 AHSA2Q719I0 299 aa11.69□□□□□ -0.54
SNRPA1-216ENST00000626000 PNLDC1Q8NA58 520 aaKnown RBP11.69□□□□□ -0.54
SNRPA1-216ENST00000626000 POC1AQ8NBT0 407 aa11.69□□□□□ -0.54
SNRPA1-216ENST00000626000 BPIFB6Q8NFQ5 453 aa11.69□□□□□ -0.54
SNRPA1-216ENST00000626000 NANPQ8TBE9 248 aa11.69□□□□□ -0.54
SNRPA1-216ENST00000626000 GPR148Q8TDV2 347 aa11.69□□□□□ -0.54
SNRPA1-216ENST00000626000 TSEN15Q8WW01 171 aaKnown RBP11.69□□□□□ -0.54
SNRPA1-216ENST00000626000 SMIM19Q96E16 107 aa11.69□□□□□ -0.54
SNRPA1-216ENST00000626000 C7orf69Q9H7B7 122 aa11.69□□□□□ -0.54
SNRPA1-216ENST00000626000 RHOFQ9HBH0 211 aa11.69□□□□□ -0.54
SNRPA1-216ENST00000626000 RAB26Q9ULW5 256 aa11.69□□□□□ -0.54
SNRPA1-216ENST00000626000 DOCK11Q5JSL3 2073 aa11.69□□□□□ -0.54
SNRPA1-216ENST00000626000 KIAA1324LA8MWY0 1029 aaPredicted RBP11.68□□□□□ -0.54
SNRPA1-216ENST00000626000 MAGEB3O15480 346 aa11.68□□□□□ -0.54
SNRPA1-216ENST00000626000 NDUFB3O43676 98 aa11.68□□□□□ -0.54
SNRPA1-216ENST00000626000 WNT4P56705 351 aa11.68□□□□□ -0.54
SNRPA1-216ENST00000626000 IL13RA1P78552 427 aa11.68□□□□□ -0.54
SNRPA1-216ENST00000626000 BDH1Q02338 343 aa11.68□□□□□ -0.54
SNRPA1-216ENST00000626000 FAM201AQ5SY85 155 aa11.68□□□□□ -0.54
SNRPA1-216ENST00000626000 STUMQ69YW2 141 aa11.68□□□□□ -0.54
SNRPA1-216ENST00000626000 MKXQ8IYA7 352 aa11.68□□□□□ -0.54
SNRPA1-216ENST00000626000 PARP16Q8N5Y8 322 aa11.68□□□□□ -0.54
SNRPA1-216ENST00000626000 RPS4Y2Q8TD47 263 aa11.68□□□□□ -0.54
SNRPA1-216ENST00000626000 RAB40AQ8WXH6 277 aa11.68□□□□□ -0.54
SNRPA1-216ENST00000626000 FGGYQ96C11 551 aa11.68□□□□□ -0.54
SNRPA1-216ENST00000626000 MND1Q9BWT6 205 aa11.68□□□□□ -0.54
SNRPA1-216ENST00000626000 ZCCHC4Q9H5U6 513 aa11.68□□□□□ -0.54
SNRPA1-216ENST00000626000 METTL17Q9H7H0 456 aaPredicted RBP11.68□□□□□ -0.54
SNRPA1-216ENST00000626000 PPP1R3EQ9H7J1 279 aa11.68□□□□□ -0.54
SNRPA1-216ENST00000626000 FKBP14Q9NWM8 211 aa11.68□□□□□ -0.54
SNRPA1-216ENST00000626000 NLKQ9UBE8 527 aa11.68□□□□□ -0.54
SNRPA1-216ENST00000626000 INSIG2Q9Y5U4 225 aa11.68□□□□□ -0.54
SNRPA1-216ENST00000626000 LOC105371242A0A075B767 164 aa11.67□□□□□ -0.54
SNRPA1-216ENST00000626000 IGHV2-70DA0A0C4DH43 119 aa11.67□□□□□ -0.54
SNRPA1-216ENST00000626000 FAM230AA0A1W2PPH8 454 aa11.67□□□□□ -0.54
SNRPA1-216ENST00000626000 OR2AT4A6NND4 320 aa11.67□□□□□ -0.54
SNRPA1-216ENST00000626000 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP11.67□□□□□ -0.54
SNRPA1-216ENST00000626000 SLC1A7O00341 560 aa11.67□□□□□ -0.54
SNRPA1-216ENST00000626000 TNFRSF13BO14836 293 aaPredicted RBP11.67□□□□□ -0.54
SNRPA1-216ENST00000626000 OGG1O15527 345 aa11.67□□□□□ -0.54
SNRPA1-216ENST00000626000 XPNPEP2O43895 674 aa11.67□□□□□ -0.54
SNRPA1-216ENST00000626000 NXPH2O95156 264 aa11.67□□□□□ -0.54
SNRPA1-216ENST00000626000 GYPAP02724 150 aa11.67□□□□□ -0.54
SNRPA1-216ENST00000626000 CD1AP06126 327 aa11.67□□□□□ -0.54
SNRPA1-216ENST00000626000 CDK1P06493 297 aa11.67□□□□□ -0.54
SNRPA1-216ENST00000626000 PGA5P0DJD9 388 aa11.67□□□□□ -0.54
SNRPA1-216ENST00000626000 EGR1P18146 543 aa11.67□□□□□ -0.54
SNRPA1-216ENST00000626000 ATF1P18846 271 aa11.67□□□□□ -0.54
SNRPA1-216ENST00000626000 UBE2V2Q15819 145 aa11.67□□□□□ -0.54
SNRPA1-216ENST00000626000 YIF1BQ5BJH7 314 aa11.67□□□□□ -0.54
SNRPA1-216ENST00000626000 OR2G6Q5TZ20 316 aa11.67□□□□□ -0.54
SNRPA1-216ENST00000626000 C1QL2Q7Z5L3 287 aa11.67□□□□□ -0.54
SNRPA1-216ENST00000626000 RDH10Q8IZV5 341 aa11.67□□□□□ -0.54
SNRPA1-216ENST00000626000 ADAT3Q96EY9 351 aaPredicted RBP11.67□□□□□ -0.54
SNRPA1-216ENST00000626000 OPALINQ96PE5 141 aa11.67□□□□□ -0.54
SNRPA1-216ENST00000626000 NRIP2Q9BQI9 281 aa11.67□□□□□ -0.54
SNRPA1-216ENST00000626000 CDCA4Q9BXL8 241 aa11.67□□□□□ -0.54
SNRPA1-216ENST00000626000 FGF23Q9GZV9 251 aaPredicted RBP11.67□□□□□ -0.54
SNRPA1-216ENST00000626000 ZNF281Q9Y2X9 895 aa11.67□□□□□ -0.54
SNRPA1-216ENST00000626000 AUP1Q9Y679 476 aa11.67□□□□□ -0.54
SNRPA1-216ENST00000626000 WNK2Q9Y3S1 2297 aa11.67□□□□□ -0.54
SNRPA1-216ENST00000626000 KIR2DS1A0A191URI9 304 aa11.66□□□□□ -0.54
SNRPA1-216ENST00000626000 PHF1O43189 567 aaPredicted RBP11.66□□□□□ -0.54
SNRPA1-216ENST00000626000 AKR7A2O43488 359 aa11.66□□□□□ -0.54
SNRPA1-216ENST00000626000 SULT1B1O43704 296 aa11.66□□□□□ -0.54
SNRPA1-216ENST00000626000 KNG1P01042 644 aa11.66□□□□□ -0.54
SNRPA1-216ENST00000626000 AZGP1P25311 298 aaKnown RBP11.66□□□□□ -0.54
SNRPA1-216ENST00000626000 ZFP36P26651 326 aaKnown RBP11.66□□□□□ -0.54
SNRPA1-216ENST00000626000 MTCP1P56278 107 aa11.66□□□□□ -0.54
SNRPA1-216ENST00000626000 BPIFB3P59826 476 aa11.66□□□□□ -0.54
SNRPA1-216ENST00000626000 SEC61A1P61619 476 aaKnown RBP11.66□□□□□ -0.54
SNRPA1-216ENST00000626000 PPP3R1P63098 170 aa11.66□□□□□ -0.54
SNRPA1-216ENST00000626000 ZNF841Q6ZN19 808 aa11.66□□□□□ -0.54
SNRPA1-216ENST00000626000 ZNF788Q6ZQV5 615 aa11.66□□□□□ -0.54
SNRPA1-216ENST00000626000 SAXO1Q8IYX7 474 aa11.66□□□□□ -0.54
SNRPA1-216ENST00000626000 TRMT10AQ8TBZ6 339 aaKnown RBP11.66□□□□□ -0.54
SNRPA1-216ENST00000626000 CEP19Q96LK0 163 aa11.66□□□□□ -0.54
SNRPA1-216ENST00000626000 PDCD1LG2Q9BQ51 273 aa11.66□□□□□ -0.54
SNRPA1-216ENST00000626000 TMPRSS13Q9BYE2 586 aa11.66□□□□□ -0.54
SNRPA1-216ENST00000626000 RASSF4Q9H2L5 321 aa11.66□□□□□ -0.54
SNRPA1-216ENST00000626000 SEBOXQ9HB31 216 aaPredicted RBP11.66□□□□□ -0.54
SNRPA1-216ENST00000626000 CKLFQ9UBR5 152 aa11.66□□□□□ -0.54
SNRPA1-216ENST00000626000 A0A0A6YYJ9 748 aa11.65□□□□□ -0.54
SNRPA1-216ENST00000626000 A0A1W2PPH5 198 aa11.65□□□□□ -0.54
SNRPA1-216ENST00000626000 A6NIN4 97 aa11.65□□□□□ -0.54
SNRPA1-216ENST00000626000 E9PI62 339 aa11.65□□□□□ -0.54
SNRPA1-216ENST00000626000 DVL1O14640 695 aa11.65□□□□□ -0.54
SNRPA1-216ENST00000626000 SIGLEC5O15389 551 aa11.65□□□□□ -0.54
SNRPA1-216ENST00000626000 RHBDL1O75783 438 aa11.65□□□□□ -0.54
SNRPA1-216ENST00000626000 RAB3AP20336 220 aa11.65□□□□□ -0.54
SNRPA1-216ENST00000626000 MAPK3P27361 379 aaPredicted RBP11.65□□□□□ -0.54
SNRPA1-216ENST00000626000 BMXP51813 675 aa11.65□□□□□ -0.54
SNRPA1-216ENST00000626000 CAV3P56539 151 aa11.65□□□□□ -0.54
SNRPA1-216ENST00000626000 PAX8Q06710 450 aa11.65□□□□□ -0.54
SNRPA1-216ENST00000626000 ACSM1Q08AH1 577 aa11.65□□□□□ -0.54
SNRPA1-216ENST00000626000 ARMCX4Q5H9R4 360 aa11.65□□□□□ -0.54
SNRPA1-216ENST00000626000 RBM48Q5RL73 367 aaKnown RBP11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms