RNA–Protein interactions for RNA: ENST00000623253.4_PAR_Y

CD99-211, Transcript of CD99 molecule (Xg blood group), humanhuman

TSL 1 (best)

Gene CD99, Length 573 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD99-211ENST00000623253_PAR_Y OR8B12Q8NGG6 310 aa13.11□□□□□ -0.31
CD99-211ENST00000623253_PAR_Y OR5K1Q8NHB7 308 aa13.11□□□□□ -0.31
CD99-211ENST00000623253_PAR_Y SDSLQ96GA7 329 aa13.11□□□□□ -0.31
CD99-211ENST00000623253_PAR_Y ABCB10Q9NRK6 738 aa13.11□□□□□ -0.31
CD99-211ENST00000623253_PAR_Y MEGF11A6BM72 1044 aa13.1□□□□□ -0.31
CD99-211ENST00000623253_PAR_Y RFPL4AA6NLU0 287 aa13.1□□□□□ -0.31
CD99-211ENST00000623253_PAR_Y RFPL4AL1F8VTS6 287 aa13.1□□□□□ -0.31
CD99-211ENST00000623253_PAR_Y SLC1A7O00341 560 aa13.1□□□□□ -0.31
CD99-211ENST00000623253_PAR_Y MPIG6BO95866 241 aa13.1□□□□□ -0.31
CD99-211ENST00000623253_PAR_Y OSMP13725 252 aa13.1□□□□□ -0.31
CD99-211ENST00000623253_PAR_Y CCL3L1P16619 93 aa13.1□□□□□ -0.31
CD99-211ENST00000623253_PAR_Y MAP2K3P46734 347 aa13.1□□□□□ -0.31
CD99-211ENST00000623253_PAR_Y CEACAM21Q3KPI0 293 aa13.1□□□□□ -0.31
CD99-211ENST00000623253_PAR_Y DNAL1Q4LDG9 190 aa13.1□□□□□ -0.31
CD99-211ENST00000623253_PAR_Y FOXB2Q5VYV0 432 aa13.1□□□□□ -0.31
CD99-211ENST00000623253_PAR_Y PLBD1Q6P4A8 553 aa13.1□□□□□ -0.31
CD99-211ENST00000623253_PAR_Y MOB3CQ70IA8 216 aa13.1□□□□□ -0.31
CD99-211ENST00000623253_PAR_Y TRPM8Q7Z2W7 1104 aa13.1□□□□□ -0.31
CD99-211ENST00000623253_PAR_Y TMEM219Q86XT9 240 aa13.1□□□□□ -0.31
CD99-211ENST00000623253_PAR_Y OR2T27Q8NH04 317 aa13.1□□□□□ -0.31
CD99-211ENST00000623253_PAR_Y OTOSQ8NHW6 89 aa13.1□□□□□ -0.31
CD99-211ENST00000623253_PAR_Y AQP3Q92482 292 aa13.1□□□□□ -0.31
CD99-211ENST00000623253_PAR_Y ZNF488Q96MN9 340 aa13.1□□□□□ -0.31
CD99-211ENST00000623253_PAR_Y TEX12Q9BXU0 123 aa13.1□□□□□ -0.31
CD99-211ENST00000623253_PAR_Y USE1Q9NZ43 259 aa13.1□□□□□ -0.31
CD99-211ENST00000623253_PAR_Y GYG2O15488 501 aa13.09□□□□□ -0.31
CD99-211ENST00000623253_PAR_Y PRODHO43272 600 aa13.09□□□□□ -0.31
CD99-211ENST00000623253_PAR_Y SELENOFO60613 162 aa13.09□□□□□ -0.31
CD99-211ENST00000623253_PAR_Y PIPP12273 146 aaPredicted RBP13.09□□□□□ -0.31
CD99-211ENST00000623253_PAR_Y ANXA8P13928 327 aa13.09□□□□□ -0.31
CD99-211ENST00000623253_PAR_Y PRDX2P32119 198 aa13.09□□□□□ -0.31
CD99-211ENST00000623253_PAR_Y CEBPDP49716 269 aaPredicted RBP13.09□□□□□ -0.31
CD99-211ENST00000623253_PAR_Y PSMA6P60900 246 aaKnown RBP13.09□□□□□ -0.31
CD99-211ENST00000623253_PAR_Y FLOT2Q14254 428 aa13.09□□□□□ -0.31
CD99-211ENST00000623253_PAR_Y CNN3Q15417 329 aaKnown RBP13.09□□□□□ -0.31
CD99-211ENST00000623253_PAR_Y SLC35D3Q5M8T2 416 aa13.09□□□□□ -0.31
CD99-211ENST00000623253_PAR_Y SPATA24Q86W54 205 aa13.09□□□□□ -0.31
CD99-211ENST00000623253_PAR_Y CPOQ8IVL8 374 aa13.09□□□□□ -0.31
CD99-211ENST00000623253_PAR_Y DYNAPQ8N1N2 210 aa13.09□□□□□ -0.31
CD99-211ENST00000623253_PAR_Y C11orf42Q8N5U0 333 aa13.09□□□□□ -0.31
CD99-211ENST00000623253_PAR_Y CD177Q8N6Q3 437 aa13.09□□□□□ -0.31
CD99-211ENST00000623253_PAR_Y CDCA4Q9BXL8 241 aa13.09□□□□□ -0.31
CD99-211ENST00000623253_PAR_Y PRSS22Q9GZN4 317 aa13.09□□□□□ -0.31
CD99-211ENST00000623253_PAR_Y EXOSC5Q9NQT4 235 aaKnown RBP eCLIP13.09□□□□□ -0.31
CD99-211ENST00000623253_PAR_Y RASL12Q9NYN1 266 aa13.09□□□□□ -0.31
CD99-211ENST00000623253_PAR_Y TCF19Q9Y242 345 aa13.09□□□□□ -0.31
CD99-211ENST00000623253_PAR_Y A0A1W2PRX2 142 aa13.08□□□□□ -0.32
CD99-211ENST00000623253_PAR_Y GSC2O15499 205 aa13.08□□□□□ -0.32
CD99-211ENST00000623253_PAR_Y FKBP6O75344 327 aa13.08□□□□□ -0.32
CD99-211ENST00000623253_PAR_Y MTRF1O75570 445 aaKnown RBP13.08□□□□□ -0.32
CD99-211ENST00000623253_PAR_Y ARG1P05089 322 aa13.08□□□□□ -0.32
CD99-211ENST00000623253_PAR_Y IGLL1P15814 213 aa13.08□□□□□ -0.32
CD99-211ENST00000623253_PAR_Y CD33P20138 364 aa13.08□□□□□ -0.32
CD99-211ENST00000623253_PAR_Y CBX1P83916 185 aa13.08□□□□□ -0.32
CD99-211ENST00000623253_PAR_Y CDK5Q00535 292 aa13.08□□□□□ -0.32
CD99-211ENST00000623253_PAR_Y SSX2Q16385 188 aa13.08□□□□□ -0.32
CD99-211ENST00000623253_PAR_Y SMIM21Q3B7S5 101 aa13.08□□□□□ -0.32
CD99-211ENST00000623253_PAR_Y VAX1Q5SQQ9 334 aa13.08□□□□□ -0.32
CD99-211ENST00000623253_PAR_Y PLCXD3Q63HM9 321 aa13.08□□□□□ -0.32
CD99-211ENST00000623253_PAR_Y CCBE1Q6UXH8 406 aaPredicted RBP13.08□□□□□ -0.32
CD99-211ENST00000623253_PAR_Y ACP7Q6ZNF0 438 aa13.08□□□□□ -0.32
CD99-211ENST00000623253_PAR_Y KRT77Q7Z794 578 aa13.08□□□□□ -0.32
CD99-211ENST00000623253_PAR_Y HS3ST5Q8IZT8 346 aa13.08□□□□□ -0.32
CD99-211ENST00000623253_PAR_Y BATF2Q8N1L9 274 aa13.08□□□□□ -0.32
CD99-211ENST00000623253_PAR_Y ZNF561Q8N587 486 aa13.08□□□□□ -0.32
CD99-211ENST00000623253_PAR_Y OR5A2Q8NGI9 324 aa13.08□□□□□ -0.32
CD99-211ENST00000623253_PAR_Y NIPAL2Q9H841 368 aa13.08□□□□□ -0.32
CD99-211ENST00000623253_PAR_Y DNAJB9Q9UBS3 223 aa13.08□□□□□ -0.32
CD99-211ENST00000623253_PAR_Y KLHDC2Q9Y2U9 406 aa13.08□□□□□ -0.32
CD99-211ENST00000623253_PAR_Y LRP12Q9Y561 859 aa13.08□□□□□ -0.32
CD99-211ENST00000623253_PAR_Y TCRBV3S1A0A5B6 114 aa13.07□□□□□ -0.32
CD99-211ENST00000623253_PAR_Y OR5B21A6NL26 309 aa13.07□□□□□ -0.32
CD99-211ENST00000623253_PAR_Y ADARB2-AS1A8MUL3 147 aa13.07□□□□□ -0.32
CD99-211ENST00000623253_PAR_Y VGLL3A8MV65 326 aa13.07□□□□□ -0.32
CD99-211ENST00000623253_PAR_Y DYNC1I1O14576 645 aa13.07□□□□□ -0.32
CD99-211ENST00000623253_PAR_Y FAHP16930 419 aa13.07□□□□□ -0.32
CD99-211ENST00000623253_PAR_Y RPS7P62081 194 aaKnown RBP13.07□□□□□ -0.32
CD99-211ENST00000623253_PAR_Y RIPPLY1Q0D2K3 151 aa13.07□□□□□ -0.32
CD99-211ENST00000623253_PAR_Y ZNF273Q14593 569 aa13.07□□□□□ -0.32
CD99-211ENST00000623253_PAR_Y Q8N2B8 174 aa13.07□□□□□ -0.32
CD99-211ENST00000623253_PAR_Y RPS4Y2Q8TD47 263 aa13.07□□□□□ -0.32
CD99-211ENST00000623253_PAR_Y DNAJC9Q8WXX5 260 aa13.07□□□□□ -0.32
CD99-211ENST00000623253_PAR_Y SLC25A19Q9HC21 320 aa13.07□□□□□ -0.32
CD99-211ENST00000623253_PAR_Y OR14J1Q9UGF5 321 aa13.07□□□□□ -0.32
CD99-211ENST00000623253_PAR_Y PITPNC1Q9UKF7 332 aa13.07□□□□□ -0.32
CD99-211ENST00000623253_PAR_Y NBEAL2Q6ZNJ1 2754 aa13.07□□□□□ -0.32
CD99-211ENST00000623253_PAR_Y TMEM269A0A1B0GVZ9 245 aa13.06□□□□□ -0.32
CD99-211ENST00000623253_PAR_Y MEX3AA1L020 520 aaKnown RBP13.06□□□□□ -0.32
CD99-211ENST00000623253_PAR_Y A6NDX4 124 aa13.06□□□□□ -0.32
CD99-211ENST00000623253_PAR_Y FAM90A8PA6NJQ4 464 aa13.06□□□□□ -0.32
CD99-211ENST00000623253_PAR_Y PSMD9O00233 223 aa13.06□□□□□ -0.32
CD99-211ENST00000623253_PAR_Y SYNGR1O43759 233 aa13.06□□□□□ -0.32
CD99-211ENST00000623253_PAR_Y PRKACGP22612 351 aa13.06□□□□□ -0.32
CD99-211ENST00000623253_PAR_Y HCCSP53701 268 aa13.06□□□□□ -0.32
CD99-211ENST00000623253_PAR_Y DYNC1I2Q13409 638 aaKnown RBP13.06□□□□□ -0.32
CD99-211ENST00000623253_PAR_Y DEFB121Q5J5C9 76 aa13.06□□□□□ -0.32
CD99-211ENST00000623253_PAR_Y POC1AQ8NBT0 407 aa13.06□□□□□ -0.32
CD99-211ENST00000623253_PAR_Y BBS1Q8NFJ9 593 aa13.06□□□□□ -0.32
CD99-211ENST00000623253_PAR_Y OR13D1Q8NGV5 346 aa13.06□□□□□ -0.32
CD99-211ENST00000623253_PAR_Y BCAS4Q8TDM0 211 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 71.3 ms