RNA–Protein interactions for RNA: ENST00000622309.4

VPS11-209, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS11, Length 3,352 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-209ENST00000622309 CST5P28325 142 aaPredicted RBP7.01□□□□□ -1.29
VPS11-209ENST00000622309 APOBEC1P41238 236 aaKnown RBP7.01□□□□□ -1.29
VPS11-209ENST00000622309 P2RY1P47900 373 aa7.01□□□□□ -1.29
VPS11-209ENST00000622309 RPL23AP62750 156 aaKnown RBP7.01□□□□□ -1.29
VPS11-209ENST00000622309 CDK3Q00526 305 aa7.01□□□□□ -1.29
VPS11-209ENST00000622309 FZD2Q14332 565 aa7.01□□□□□ -1.29
VPS11-209ENST00000622309 GGTLC2Q14390 218 aa7.01□□□□□ -1.29
VPS11-209ENST00000622309 ANKRD55Q3KP44 614 aa7.01□□□□□ -1.29
VPS11-209ENST00000622309 GLYATL3Q5SZD4 288 aa7.01□□□□□ -1.29
VPS11-209ENST00000622309 LDLRAD2Q5SZI1 272 aa7.01□□□□□ -1.29
VPS11-209ENST00000622309 PHF19Q5T6S3 580 aa7.01□□□□□ -1.29
VPS11-209ENST00000622309 LIN28BQ6ZN17 250 aaKnown RBP eCLIP7.01□□□□□ -1.29
VPS11-209ENST00000622309 EXD3Q8N9H8 876 aa7.01□□□□□ -1.29
VPS11-209ENST00000622309 OR10AC1Q8NH08 325 aa7.01□□□□□ -1.29
VPS11-209ENST00000622309 RPS4Y2Q8TD47 263 aa7.01□□□□□ -1.29
VPS11-209ENST00000622309 GRHL3Q8TE85 626 aa7.01□□□□□ -1.29
VPS11-209ENST00000622309 SMIM12Q96EX1 92 aa7.01□□□□□ -1.29
VPS11-209ENST00000622309 TBL1XR1Q9BZK7 514 aa7.01□□□□□ -1.29
VPS11-209ENST00000622309 GPR35Q9HC97 309 aa7.01□□□□□ -1.29
VPS11-209ENST00000622309 CENPMQ9NSP4 180 aa7.01□□□□□ -1.29
VPS11-209ENST00000622309 C14orf166Q9Y224 244 aaKnown RBP7.01□□□□□ -1.29
VPS11-209ENST00000622309 ZNF443Q9Y2A4 671 aaPredicted RBP7.01□□□□□ -1.29
VPS11-209ENST00000622309 IER3IP1Q9Y5U9 82 aa7.01□□□□□ -1.29
VPS11-209ENST00000622309 TRBV5-7A0A0A0MS05 114 aa7□□□□□ -1.29
VPS11-209ENST00000622309 A0A0A6YYH2 397 aa7□□□□□ -1.29
VPS11-209ENST00000622309 TRAV39A0A0B4J263 110 aa7□□□□□ -1.29
VPS11-209ENST00000622309 A6NJ64 397 aa7□□□□□ -1.29
VPS11-209ENST00000622309 C17orf105B2RV13 164 aa7□□□□□ -1.29
VPS11-209ENST00000622309 IFNA21P01568 189 aa7□□□□□ -1.29
VPS11-209ENST00000622309 PDLIM4P50479 330 aa7□□□□□ -1.29
VPS11-209ENST00000622309 ACOT6Q3I5F7 207 aaPredicted RBP7□□□□□ -1.29
VPS11-209ENST00000622309 FBLN7Q53RD9 439 aa7□□□□□ -1.29
VPS11-209ENST00000622309 CST9LP1Q5W188 147 aa7□□□□□ -1.29
VPS11-209ENST00000622309 PLXDC2Q6UX71 529 aa7□□□□□ -1.29
VPS11-209ENST00000622309 ZNF550Q7Z398 422 aa7□□□□□ -1.29
VPS11-209ENST00000622309 LINC01551Q86U37 167 aa7□□□□□ -1.29
VPS11-209ENST00000622309 C17orf78Q8N4C9 275 aa7□□□□□ -1.29
VPS11-209ENST00000622309 OR56A1Q8NGH5 318 aa7□□□□□ -1.29
VPS11-209ENST00000622309 OR51A4Q8NGJ6 313 aa7□□□□□ -1.29
VPS11-209ENST00000622309 ZNF480Q8WV37 535 aa7□□□□□ -1.29
VPS11-209ENST00000622309 MOB3AQ96BX8 217 aa7□□□□□ -1.29
VPS11-209ENST00000622309 PRSS27Q9BQR3 290 aa7□□□□□ -1.29
VPS11-209ENST00000622309 MTIF3Q9H2K0 278 aaKnown RBP7□□□□□ -1.29
VPS11-209ENST00000622309 RBKSQ9H477 322 aa7□□□□□ -1.29
VPS11-209ENST00000622309 KIAA1456Q9P272 454 aa7□□□□□ -1.29
VPS11-209ENST00000622309 CKLFQ9UBR5 152 aa7□□□□□ -1.29
VPS11-209ENST00000622309 NLRC5Q86WI3 1866 aa7□□□□□ -1.29
VPS11-209ENST00000622309 CHD7Q9P2D1 2997 aa7□□□□□ -1.29
VPS11-209ENST00000622309 NDUFB8O95169 186 aa7□□□□□ -1.29
VPS11-209ENST00000622309 BRI3O95415 125 aa7□□□□□ -1.29
VPS11-209ENST00000622309 FPR2P25090 351 aa7□□□□□ -1.29
VPS11-209ENST00000622309 CLDN2P57739 230 aa7□□□□□ -1.29
VPS11-209ENST00000622309 RAB11AP62491 216 aa7□□□□□ -1.29
VPS11-209ENST00000622309 GPR18Q14330 331 aa7□□□□□ -1.29
VPS11-209ENST00000622309 OR1Q1Q15612 314 aa7□□□□□ -1.29
VPS11-209ENST00000622309 SLC22A6Q4U2R8 563 aa7□□□□□ -1.29
VPS11-209ENST00000622309 ADGRE4PQ86SQ3 457 aa7□□□□□ -1.29
VPS11-209ENST00000622309 HOGA1Q86XE5 327 aa7□□□□□ -1.29
VPS11-209ENST00000622309 ZNF761Q86XN6 746 aaPredicted RBP7□□□□□ -1.29
VPS11-209ENST00000622309 WDFY1Q8IWB7 410 aa7□□□□□ -1.29
VPS11-209ENST00000622309 STPG4Q8N801 248 aa7□□□□□ -1.29
VPS11-209ENST00000622309 ADAMTS15Q8TE58 950 aa7□□□□□ -1.29
VPS11-209ENST00000622309 WBP2Q969T9 261 aa7□□□□□ -1.29
VPS11-209ENST00000622309 OR5B12Q96R08 314 aa7□□□□□ -1.29
VPS11-209ENST00000622309 CITED2Q99967 270 aaPredicted RBP7□□□□□ -1.29
VPS11-209ENST00000622309 PCGF1Q9BSM1 259 aa7□□□□□ -1.29
VPS11-209ENST00000622309 FBXO34Q9NWN3 711 aa7□□□□□ -1.29
VPS11-209ENST00000622309 B4GALT6Q9UBX8 382 aa7□□□□□ -1.29
VPS11-209ENST00000622309 HSPB7Q9UBY9 170 aa7□□□□□ -1.29
VPS11-209ENST00000622309 FUT9Q9Y231 359 aa7□□□□□ -1.29
VPS11-209ENST00000622309 RCL1Q9Y2P8 373 aaKnown RBP7□□□□□ -1.29
VPS11-209ENST00000622309 MRPS18BQ9Y676 258 aaKnown RBP7□□□□□ -1.29
VPS11-209ENST00000622309 LTBP2Q14767 1821 aa7□□□□□ -1.29
VPS11-209ENST00000622309 PTPRDP23468 1912 aa7□□□□□ -1.29
VPS11-209ENST00000622309 XIRP2A4UGR9 3374 aa7□□□□□ -1.29
VPS11-209ENST00000622309 A0A1B0GU03 582 aa7□□□□□ -1.29
VPS11-209ENST00000622309 FAM230AA0A1W2PPH8 454 aa7□□□□□ -1.29
VPS11-209ENST00000622309 GLOD5A6NK44 160 aa7□□□□□ -1.29
VPS11-209ENST00000622309 TMEM212A6NML5 194 aa7□□□□□ -1.29
VPS11-209ENST00000622309 ZNF891A8MT65 544 aaPredicted RBP7□□□□□ -1.29
VPS11-209ENST00000622309 IFNL4K9M1U5 179 aa7□□□□□ -1.29
VPS11-209ENST00000622309 TBL1XO60907 577 aa7□□□□□ -1.29
VPS11-209ENST00000622309 DEDDO75618 318 aa7□□□□□ -1.29
VPS11-209ENST00000622309 CKMP06732 381 aa7□□□□□ -1.29
VPS11-209ENST00000622309 CTSAP10619 480 aa7□□□□□ -1.29
VPS11-209ENST00000622309 ARF3P61204 181 aaPredicted RBP7□□□□□ -1.29
VPS11-209ENST00000622309 ARF1P84077 181 aaKnown RBP7□□□□□ -1.29
VPS11-209ENST00000622309 SPEM2Q0P670 501 aa7□□□□□ -1.29
VPS11-209ENST00000622309 EIPR1Q53HC9 387 aa7□□□□□ -1.29
VPS11-209ENST00000622309 OCIAD2Q56VL3 154 aa7□□□□□ -1.29
VPS11-209ENST00000622309 C9orf50Q5SZB4 431 aa7□□□□□ -1.29
VPS11-209ENST00000622309 WFDC8Q8IUA0 241 aa7□□□□□ -1.29
VPS11-209ENST00000622309 C9orf40Q8IXQ3 194 aa7□□□□□ -1.29
VPS11-209ENST00000622309 NECAP1Q8NC96 275 aa7□□□□□ -1.29
VPS11-209ENST00000622309 FNDC9Q8TBE3 224 aa7□□□□□ -1.29
VPS11-209ENST00000622309 TMEM170AQ8WVE7 144 aa7□□□□□ -1.29
VPS11-209ENST00000622309 DNASE2BQ8WZ79 361 aa7□□□□□ -1.29
VPS11-209ENST00000622309 DYRK2Q92630 601 aa7□□□□□ -1.29
VPS11-209ENST00000622309 NMNAT3Q96T66 252 aa7□□□□□ -1.29
VPS11-209ENST00000622309 CTDSP1Q9GZU7 261 aa7□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms