RNA–Protein interactions for RNA: ENST00000622020.4

NPHP4-211, Transcript of nephrocystin 4, humanhuman

TSL 5 BASIC

Gene NPHP4, Length 3,004 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-211ENST00000622020 ACTBL2Q562R1 376 aa13.82□□□□□ -0.2
NPHP4-211ENST00000622020 LYZL2Q7Z4W2 148 aa13.82□□□□□ -0.2
NPHP4-211ENST00000622020 OR5L1Q8NGL2 311 aa13.82□□□□□ -0.2
NPHP4-211ENST00000622020 OR14K1Q8NGZ2 314 aa13.82□□□□□ -0.2
NPHP4-211ENST00000622020 EMG1Q92979 244 aaKnown RBP13.82□□□□□ -0.2
NPHP4-211ENST00000622020 IGHV1OR15-9A0A0B4J2B8 117 aa13.82□□□□□ -0.2
NPHP4-211ENST00000622020 S100A9P06702 114 aaKnown RBP13.82□□□□□ -0.2
NPHP4-211ENST00000622020 TAS2R46P59540 309 aa13.82□□□□□ -0.2
NPHP4-211ENST00000622020 NHLH2Q02577 135 aa13.82□□□□□ -0.2
NPHP4-211ENST00000622020 IL15RAQ13261 267 aa13.82□□□□□ -0.2
NPHP4-211ENST00000622020 C5orf46Q6UWT4 87 aa13.82□□□□□ -0.2
NPHP4-211ENST00000622020 DOK3Q7L591 496 aa13.82□□□□□ -0.2
NPHP4-211ENST00000622020 IFNA21P01568 189 aa13.81□□□□□ -0.2
NPHP4-211ENST00000622020 OR5AC1P0C628 307 aa13.81□□□□□ -0.2
NPHP4-211ENST00000622020 CAMLGP49069 296 aa13.81□□□□□ -0.2
NPHP4-211ENST00000622020 C5orf24Q7Z6I8 188 aa13.81□□□□□ -0.2
NPHP4-211ENST00000622020 MVB12AQ96EY5 273 aa13.81□□□□□ -0.2
NPHP4-211ENST00000622020 SHDQ96IW2 340 aa13.81□□□□□ -0.2
NPHP4-211ENST00000622020 GPHA2Q96T91 129 aa13.81□□□□□ -0.2
NPHP4-211ENST00000622020 SPSB2Q99619 263 aa13.81□□□□□ -0.2
NPHP4-211ENST00000622020 TINAGQ9UJW2 476 aa13.81□□□□□ -0.2
NPHP4-211ENST00000622020 PADI1Q9ULC6 663 aa13.81□□□□□ -0.2
NPHP4-211ENST00000622020 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa13.81□□□□□ -0.2
NPHP4-211ENST00000622020 NUDT19A8MXV4 375 aa13.81□□□□□ -0.2
NPHP4-211ENST00000622020 NXPH3O95157 252 aa13.81□□□□□ -0.2
NPHP4-211ENST00000622020 HAAOP46952 286 aa13.81□□□□□ -0.2
NPHP4-211ENST00000622020 HGFACQ04756 655 aa13.81□□□□□ -0.2
NPHP4-211ENST00000622020 PLPPR5Q32ZL2 321 aa13.81□□□□□ -0.2
NPHP4-211ENST00000622020 PHYHD1Q5SRE7 291 aa13.81□□□□□ -0.2
NPHP4-211ENST00000622020 TMEM268Q5VZI3 342 aa13.81□□□□□ -0.2
NPHP4-211ENST00000622020 CRIP3Q6Q6R5 217 aa13.81□□□□□ -0.2
NPHP4-211ENST00000622020 SUMF1Q8NBK3 374 aa13.81□□□□□ -0.2
NPHP4-211ENST00000622020 AKIRIN1Q9H9L7 192 aaPredicted RBP13.81□□□□□ -0.2
NPHP4-211ENST00000622020 WFDC1Q9HC57 220 aa13.81□□□□□ -0.2
NPHP4-211ENST00000622020 DEDDO75618 318 aa13.8□□□□□ -0.2
NPHP4-211ENST00000622020 OR5H8P0DN80 308 aa13.8□□□□□ -0.2
NPHP4-211ENST00000622020 LYL1P12980 280 aa13.8□□□□□ -0.2
NPHP4-211ENST00000622020 OMGP23515 440 aa13.8□□□□□ -0.2
NPHP4-211ENST00000622020 GUCA1AP43080 201 aaPredicted RBP13.8□□□□□ -0.2
NPHP4-211ENST00000622020 GUK1Q16774 197 aa13.8□□□□□ -0.2
NPHP4-211ENST00000622020 CPEB2Q7Z5Q1 589 aaKnown RBP13.8□□□□□ -0.2
NPHP4-211ENST00000622020 OR11L1Q8NGX0 322 aa13.8□□□□□ -0.2
NPHP4-211ENST00000622020 ZNF837Q96EG3 531 aaPredicted RBP13.8□□□□□ -0.2
NPHP4-211ENST00000622020 JSRP1Q96MG2 331 aaPredicted RBP13.8□□□□□ -0.2
NPHP4-211ENST00000622020 DNAJB11Q9UBS4 358 aa13.8□□□□□ -0.2
NPHP4-211ENST00000622020 GHRLQ9UBU3 117 aa13.8□□□□□ -0.2
NPHP4-211ENST00000622020 PUS1Q9Y606 427 aaKnown RBP eCLIP13.8□□□□□ -0.2
NPHP4-211ENST00000622020 FAM186AA6NE01 2351 aa13.8□□□□□ -0.2
NPHP4-211ENST00000622020 LMO7DNF2Z398 122 aa13.8□□□□□ -0.2
NPHP4-211ENST00000622020 MBPP02686 304 aaPredicted RBP13.8□□□□□ -0.2
NPHP4-211ENST00000622020 IFNA4P05014 189 aa13.8□□□□□ -0.2
NPHP4-211ENST00000622020 PATE4P0C8F1 98 aa13.8□□□□□ -0.2
NPHP4-211ENST00000622020 EIF5AP63241 154 aaKnown RBP13.8□□□□□ -0.2
NPHP4-211ENST00000622020 NCMAPQ5T1S8 102 aa13.8□□□□□ -0.2
NPHP4-211ENST00000622020 PLXDC2Q6UX71 529 aa13.8□□□□□ -0.2
NPHP4-211ENST00000622020 MEX3BQ6ZN04 569 aaKnown RBP13.8□□□□□ -0.2
NPHP4-211ENST00000622020 ANKRD37Q7Z713 158 aa13.8□□□□□ -0.2
NPHP4-211ENST00000622020 PLXDC1Q8IUK5 500 aa13.8□□□□□ -0.2
NPHP4-211ENST00000622020 OR52M1Q8NGK5 317 aa13.8□□□□□ -0.2
NPHP4-211ENST00000622020 OR6S1Q8NH40 331 aa13.8□□□□□ -0.2
NPHP4-211ENST00000622020 C8orf33Q9H7E9 229 aaPredicted RBP13.8□□□□□ -0.2
NPHP4-211ENST00000622020 FBLN5Q9UBX5 448 aa13.8□□□□□ -0.2
NPHP4-211ENST00000622020 FAM157AC9JC47 383 aa13.8□□□□□ -0.2
NPHP4-211ENST00000622020 GPR37O15354 613 aa13.8□□□□□ -0.2
NPHP4-211ENST00000622020 JTBO76095 146 aa13.8□□□□□ -0.2
NPHP4-211ENST00000622020 MTCP1P56278 107 aa13.8□□□□□ -0.2
NPHP4-211ENST00000622020 SLAMF9Q96A28 289 aa13.8□□□□□ -0.2
NPHP4-211ENST00000622020 ZNF501Q96CX3 271 aaPredicted RBP13.8□□□□□ -0.2
NPHP4-211ENST00000622020 MIOXQ9UGB7 285 aa13.8□□□□□ -0.2
NPHP4-211ENST00000622020 EML6Q6ZMW3 1958 aa13.79□□□□□ -0.2
NPHP4-211ENST00000622020 FIGNL2A6NMB9 653 aa13.79□□□□□ -0.2
NPHP4-211ENST00000622020 CEACAM18A8MTB9 384 aa13.79□□□□□ -0.2
NPHP4-211ENST00000622020 MSTNO14793 375 aa13.79□□□□□ -0.2
NPHP4-211ENST00000622020 ATXN7O15265 892 aaPredicted RBP13.79□□□□□ -0.2
NPHP4-211ENST00000622020 DUX1O43812 170 aa13.79□□□□□ -0.2
NPHP4-211ENST00000622020 GDF9O60383 454 aa13.79□□□□□ -0.2
NPHP4-211ENST00000622020 HEXAP06865 529 aa13.79□□□□□ -0.2
NPHP4-211ENST00000622020 LTBRP36941 435 aa13.79□□□□□ -0.2
NPHP4-211ENST00000622020 HNRNPKP61978 463 aaKnown RBP eCLIP13.79□□□□□ -0.2
NPHP4-211ENST00000622020 CLINT1Q14677 625 aa13.79□□□□□ -0.2
NPHP4-211ENST00000622020 ABCA11PQ4W5N1 156 aa13.79□□□□□ -0.2
NPHP4-211ENST00000622020 DMBX1Q8NFW5 382 aa13.79□□□□□ -0.2
NPHP4-211ENST00000622020 TCEAL3Q969E4 200 aa13.79□□□□□ -0.2
NPHP4-211ENST00000622020 PARP11Q9NR21 331 aa13.79□□□□□ -0.2
NPHP4-211ENST00000622020 PLEK2Q9NYT0 353 aa13.79□□□□□ -0.2
NPHP4-211ENST00000622020 UMAD1C9J7I0 102 aa13.79□□□□□ -0.2
NPHP4-211ENST00000622020 ACKR3P25106 362 aa13.79□□□□□ -0.2
NPHP4-211ENST00000622020 SNAI3Q3KNW1 292 aa13.79□□□□□ -0.2
NPHP4-211ENST00000622020 SLC25A47Q6Q0C1 308 aa13.79□□□□□ -0.2
NPHP4-211ENST00000622020 TMEM182Q6ZP80 229 aaPredicted RBP13.79□□□□□ -0.2
NPHP4-211ENST00000622020 SKA3Q8IX90 412 aa13.79□□□□□ -0.2
NPHP4-211ENST00000622020 TMEM156Q8N614 296 aa13.79□□□□□ -0.2
NPHP4-211ENST00000622020 SGK3Q96BR1 496 aa13.79□□□□□ -0.2
NPHP4-211ENST00000622020 ZNF385AQ96PM9 386 aaKnown RBP13.79□□□□□ -0.2
NPHP4-211ENST00000622020 UCN2Q96RP3 112 aa13.79□□□□□ -0.2
NPHP4-211ENST00000622020 RARRES2Q99969 163 aa13.79□□□□□ -0.2
NPHP4-211ENST00000622020 PIGQQ9BRB3 760 aa13.79□□□□□ -0.2
NPHP4-211ENST00000622020 ADAMTS9Q9P2N4 1935 aa13.79□□□□□ -0.2
NPHP4-211ENST00000622020 A0A1W2PR77 199 aa13.78□□□□□ -0.2
NPHP4-211ENST00000622020 TAAR5O14804 337 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 122 ms