RNA–Protein interactions for RNA: ENST00000621245.4

CPNE3-210, Transcript of copine 3, humanhuman

TSL 5

Gene CPNE3, Length 581 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-210ENST00000621245 TCRBV3S1A0A5B6 114 aa9.31□□□□□ -0.92
CPNE3-210ENST00000621245 H3BSH0 61 aa9.31□□□□□ -0.92
CPNE3-210ENST00000621245 H3BUX3 64 aa9.31□□□□□ -0.92
CPNE3-210ENST00000621245 M0QZ24 198 aa9.31□□□□□ -0.92
CPNE3-210ENST00000621245 TTRP02766 147 aa9.31□□□□□ -0.92
CPNE3-210ENST00000621245 CCL3L1P16619 93 aa9.31□□□□□ -0.92
CPNE3-210ENST00000621245 BMXP51813 675 aa9.31□□□□□ -0.92
CPNE3-210ENST00000621245 RPL15P61313 204 aaKnown RBP9.31□□□□□ -0.92
CPNE3-210ENST00000621245 GNG3P63215 75 aa9.31□□□□□ -0.92
CPNE3-210ENST00000621245 GK3PQ14409 553 aa9.31□□□□□ -0.92
CPNE3-210ENST00000621245 ZNF273Q14593 569 aa9.31□□□□□ -0.92
CPNE3-210ENST00000621245 CEACAM21Q3KPI0 293 aa9.31□□□□□ -0.92
CPNE3-210ENST00000621245 SLC35D3Q5M8T2 416 aa9.31□□□□□ -0.92
CPNE3-210ENST00000621245 SLC35E4Q6ICL7 350 aa9.31□□□□□ -0.92
CPNE3-210ENST00000621245 ACP7Q6ZNF0 438 aa9.31□□□□□ -0.92
CPNE3-210ENST00000621245 GDPGP1Q6ZNW5 385 aa9.31□□□□□ -0.92
CPNE3-210ENST00000621245 C1orf122Q6ZSJ8 110 aa9.31□□□□□ -0.92
CPNE3-210ENST00000621245 SSX6Q7RTT6 188 aa9.31□□□□□ -0.92
CPNE3-210ENST00000621245 COMMD2Q86X83 199 aa9.31□□□□□ -0.92
CPNE3-210ENST00000621245 MKXQ8IYA7 352 aa9.31□□□□□ -0.92
CPNE3-210ENST00000621245 CMTM4Q8IZR5 234 aa9.31□□□□□ -0.92
CPNE3-210ENST00000621245 FAM110DQ8TAY7 271 aaPredicted RBP9.31□□□□□ -0.92
CPNE3-210ENST00000621245 SLC7A6OSQ96CW6 309 aaPredicted RBP9.31□□□□□ -0.92
CPNE3-210ENST00000621245 OR8B4Q96RC9 309 aa9.31□□□□□ -0.92
CPNE3-210ENST00000621245 APOL4Q9BPW4 351 aa9.31□□□□□ -0.92
CPNE3-210ENST00000621245 C1orf21Q9H246 121 aa9.31□□□□□ -0.92
CPNE3-210ENST00000621245 MMP27Q9H306 513 aa9.31□□□□□ -0.92
CPNE3-210ENST00000621245 DPAGT1Q9H3H5 408 aa9.31□□□□□ -0.92
CPNE3-210ENST00000621245 TCF7L1Q9HCS4 588 aa9.31□□□□□ -0.92
CPNE3-210ENST00000621245 GPR173Q9NS66 373 aa9.31□□□□□ -0.92
CPNE3-210ENST00000621245 PIGLQ9Y2B2 252 aa9.31□□□□□ -0.92
CPNE3-210ENST00000621245 RYR3Q15413 4870 aa9.3□□□□□ -0.92
CPNE3-210ENST00000621245 A0A1B0GTI1 187 aa9.3□□□□□ -0.92
CPNE3-210ENST00000621245 RFPL4AA6NLU0 287 aa9.3□□□□□ -0.92
CPNE3-210ENST00000621245 RFPL4AL1F8VTS6 287 aa9.3□□□□□ -0.92
CPNE3-210ENST00000621245 M0R1W7 72 aa9.3□□□□□ -0.92
CPNE3-210ENST00000621245 ANGPTL7O43827 346 aa9.3□□□□□ -0.92
CPNE3-210ENST00000621245 CHST1O43916 411 aa9.3□□□□□ -0.92
CPNE3-210ENST00000621245 MTRF1O75570 445 aaKnown RBP9.3□□□□□ -0.92
CPNE3-210ENST00000621245 TSPAN9O75954 239 aa9.3□□□□□ -0.92
CPNE3-210ENST00000621245 HMGN1P05114 100 aa9.3□□□□□ -0.92
CPNE3-210ENST00000621245 UBE2E1P51965 193 aa9.3□□□□□ -0.92
CPNE3-210ENST00000621245 CAV3P56539 151 aa9.3□□□□□ -0.92
CPNE3-210ENST00000621245 ROM1Q03395 351 aa9.3□□□□□ -0.92
CPNE3-210ENST00000621245 FLOT2Q14254 428 aa9.3□□□□□ -0.92
CPNE3-210ENST00000621245 SNAPC1Q16533 368 aa9.3□□□□□ -0.92
CPNE3-210ENST00000621245 LDLRAD2Q5SZI1 272 aa9.3□□□□□ -0.92
CPNE3-210ENST00000621245 FAHD1Q6P587 224 aa9.3□□□□□ -0.92
CPNE3-210ENST00000621245 CRIP3Q6Q6R5 217 aa9.3□□□□□ -0.92
CPNE3-210ENST00000621245 DYNAPQ8N1N2 210 aa9.3□□□□□ -0.92
CPNE3-210ENST00000621245 FTMTQ8N4E7 242 aa9.3□□□□□ -0.92
CPNE3-210ENST00000621245 C11orf42Q8N5U0 333 aa9.3□□□□□ -0.92
CPNE3-210ENST00000621245 C11orf44Q8N8P7 122 aa9.3□□□□□ -0.92
CPNE3-210ENST00000621245 POC1AQ8NBT0 407 aa9.3□□□□□ -0.92
CPNE3-210ENST00000621245 PAPD5Q8NDF8 572 aaKnown RBP9.3□□□□□ -0.92
CPNE3-210ENST00000621245 OR4M1Q8NGD0 313 aa9.3□□□□□ -0.92
CPNE3-210ENST00000621245 UTP4Q969X6 686 aaKnown RBP9.3□□□□□ -0.92
CPNE3-210ENST00000621245 SDSLQ96GA7 329 aa9.3□□□□□ -0.92
CPNE3-210ENST00000621245 YIPF3Q9GZM5 350 aa9.3□□□□□ -0.92
CPNE3-210ENST00000621245 METTL8Q9H825 291 aaKnown RBP9.3□□□□□ -0.92
CPNE3-210ENST00000621245 ZNF556Q9HAH1 456 aa9.3□□□□□ -0.92
CPNE3-210ENST00000621245 ADGRL4Q9HBW9 690 aa9.3□□□□□ -0.92
CPNE3-210ENST00000621245 ABCB9Q9NP78 766 aa9.3□□□□□ -0.92
CPNE3-210ENST00000621245 DNAJB9Q9UBS3 223 aa9.3□□□□□ -0.92
CPNE3-210ENST00000621245 NUFIP1Q9UHK0 495 aaKnown RBP9.3□□□□□ -0.92
CPNE3-210ENST00000621245 FOXJ3Q9UPW0 622 aa9.3□□□□□ -0.92
CPNE3-210ENST00000621245 POMPQ9Y244 141 aa9.3□□□□□ -0.92
CPNE3-210ENST00000621245 F8VVB4 439 aa9.29□□□□□ -0.92
CPNE3-210ENST00000621245 F8VWA3 439 aa9.29□□□□□ -0.92
CPNE3-210ENST00000621245 TIMM23O14925 209 aa9.29□□□□□ -0.92
CPNE3-210ENST00000621245 APOL3O95236 402 aa9.29□□□□□ -0.92
CPNE3-210ENST00000621245 PAHP00439 452 aa9.29□□□□□ -0.92
CPNE3-210ENST00000621245 PGA5P0DJD9 388 aa9.29□□□□□ -0.92
CPNE3-210ENST00000621245 JUNBP17275 347 aaPredicted RBP9.29□□□□□ -0.92
CPNE3-210ENST00000621245 COX7A1P24310 79 aa9.29□□□□□ -0.92
CPNE3-210ENST00000621245 EEF1B2P24534 225 aaKnown RBP9.29□□□□□ -0.92
CPNE3-210ENST00000621245 CRISP1P54107 249 aa9.29□□□□□ -0.92
CPNE3-210ENST00000621245 PTGES3Q15185 160 aaKnown RBP9.29□□□□□ -0.92
CPNE3-210ENST00000621245 PLA1AQ53H76 456 aa9.29□□□□□ -0.92
CPNE3-210ENST00000621245 TMEM200BQ69YZ2 307 aa9.29□□□□□ -0.92
CPNE3-210ENST00000621245 THAP5Q7Z6K1 395 aa9.29□□□□□ -0.92
CPNE3-210ENST00000621245 LHFPL4Q7Z7J7 247 aa9.29□□□□□ -0.92
CPNE3-210ENST00000621245 CALHM1Q8IU99 346 aa9.29□□□□□ -0.92
CPNE3-210ENST00000621245 ZNF679Q8IYX0 411 aa9.29□□□□□ -0.92
CPNE3-210ENST00000621245 BEND2Q8NDZ0 799 aa9.29□□□□□ -0.92
CPNE3-210ENST00000621245 PIFOQ8TCI5 191 aa9.29□□□□□ -0.92
CPNE3-210ENST00000621245 LRTOMTQ8WZ04 291 aa9.29□□□□□ -0.92
CPNE3-210ENST00000621245 UBE2FQ969M7 185 aa9.29□□□□□ -0.92
CPNE3-210ENST00000621245 MED30Q96HR3 178 aa9.29□□□□□ -0.92
CPNE3-210ENST00000621245 CNN2Q99439 309 aaKnown RBP9.29□□□□□ -0.92
CPNE3-210ENST00000621245 SSX3Q99909 188 aa9.29□□□□□ -0.92
CPNE3-210ENST00000621245 PAPOLBQ9NRJ5 636 aaKnown RBP9.29□□□□□ -0.92
CPNE3-210ENST00000621245 MRM2Q9UI43 246 aaKnown RBP9.29□□□□□ -0.92
CPNE3-210ENST00000621245 IKZF2Q9UKS7 526 aa9.29□□□□□ -0.92
CPNE3-210ENST00000621245 GTF2A1LQ9UNN4 478 aa9.29□□□□□ -0.92
CPNE3-210ENST00000621245 SLC22A13Q9Y226 551 aa9.29□□□□□ -0.92
CPNE3-210ENST00000621245 KIAA2026Q5HYC2 2103 aa9.29□□□□□ -0.92
CPNE3-210ENST00000621245 NOTCH3Q9UM47 2321 aa9.28□□□□□ -0.92
CPNE3-210ENST00000621245 DNAH7Q8WXX0 4024 aa9.28□□□□□ -0.92
CPNE3-210ENST00000621245 PQLC2LA1A4F0 135 aa9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms