RNA–Protein interactions for RNA: ENST00000616692.1

NOP56-220, Transcript of NOP56 ribonucleoprotein, humanhuman

TSL 1 (best)

Gene NOP56, Length 2,662 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOP56-220ENST00000616692 ELAVL3Q14576 367 aaKnown RBP13.55□□□□□ -0.24
NOP56-220ENST00000616692 SYT14P1Q58G82 188 aa13.55□□□□□ -0.24
NOP56-220ENST00000616692 PLAC9Q5JTB6 97 aa13.55□□□□□ -0.24
NOP56-220ENST00000616692 GALNT16Q8N428 558 aa13.55□□□□□ -0.24
NOP56-220ENST00000616692 FGF11Q92914 225 aa13.55□□□□□ -0.24
NOP56-220ENST00000616692 SSBP4Q9BWG4 385 aaPredicted RBP13.55□□□□□ -0.24
NOP56-220ENST00000616692 DPY30Q9C005 99 aa13.55□□□□□ -0.24
NOP56-220ENST00000616692 RAB1BQ9H0U4 201 aa13.55□□□□□ -0.24
NOP56-220ENST00000616692 ZNF107Q9UII5 783 aaPredicted RBP13.55□□□□□ -0.24
NOP56-220ENST00000616692 OR11H12B2RN74 326 aa13.55□□□□□ -0.24
NOP56-220ENST00000616692 ESDP10768 282 aa13.55□□□□□ -0.24
NOP56-220ENST00000616692 OSMP13725 252 aa13.55□□□□□ -0.24
NOP56-220ENST00000616692 PRDX3P30048 256 aaKnown RBP13.55□□□□□ -0.24
NOP56-220ENST00000616692 SMAGPQ0VAQ4 97 aa13.55□□□□□ -0.24
NOP56-220ENST00000616692 GNMTQ14749 295 aa13.55□□□□□ -0.24
NOP56-220ENST00000616692 SRSF7Q16629 238 aaKnown RBP eCLIP13.55□□□□□ -0.244e-6■■□□□ 13.4
NOP56-220ENST00000616692 LRRC73Q5JTD7 316 aa13.55□□□□□ -0.24
NOP56-220ENST00000616692 UBE2NLQ5JXB2 153 aa13.55□□□□□ -0.24
NOP56-220ENST00000616692 ZNF770Q6IQ21 691 aaPredicted RBP13.55□□□□□ -0.24
NOP56-220ENST00000616692 LCTLQ6UWM7 567 aa13.55□□□□□ -0.24
NOP56-220ENST00000616692 WDR82Q6UXN9 313 aa13.55□□□□□ -0.24
NOP56-220ENST00000616692 C9orf40Q8IXQ3 194 aa13.55□□□□□ -0.24
NOP56-220ENST00000616692 MTURNQ8N3F0 131 aa13.55□□□□□ -0.24
NOP56-220ENST00000616692 OR11H1Q8NG94 326 aa13.55□□□□□ -0.24
NOP56-220ENST00000616692 OR11H2Q8NH07 326 aa13.55□□□□□ -0.24
NOP56-220ENST00000616692 ZNF582Q96NG8 517 aaPredicted RBP13.55□□□□□ -0.24
NOP56-220ENST00000616692 GNRHR2Q96P88 292 aa13.55□□□□□ -0.24
NOP56-220ENST00000616692 FRYQ5TBA9 3013 aa13.54□□□□□ -0.24
NOP56-220ENST00000616692 ARRDC5A6NEK1 342 aa13.54□□□□□ -0.24
NOP56-220ENST00000616692 ZNF860A6NHJ4 632 aa13.54□□□□□ -0.24
NOP56-220ENST00000616692 DXOO77932 396 aaKnown RBP13.54□□□□□ -0.24
NOP56-220ENST00000616692 CNIH1O95406 144 aa13.54□□□□□ -0.24
NOP56-220ENST00000616692 TSFMP43897 325 aaKnown RBP13.54□□□□□ -0.24
NOP56-220ENST00000616692 DUSP3P51452 185 aaPredicted RBP13.54□□□□□ -0.24
NOP56-220ENST00000616692 SSBP2P81877 361 aaPredicted RBP13.54□□□□□ -0.24
NOP56-220ENST00000616692 CBFBQ13951 182 aa13.54□□□□□ -0.24
NOP56-220ENST00000616692 SLC25A30Q5SVS4 291 aa13.54□□□□□ -0.24
NOP56-220ENST00000616692 KLHDC8AQ8IYD2 350 aa13.54□□□□□ -0.24
NOP56-220ENST00000616692 BATF2Q8N1L9 274 aa13.54□□□□□ -0.24
NOP56-220ENST00000616692 OR10G3Q8NGC4 313 aa13.54□□□□□ -0.24
NOP56-220ENST00000616692 OR4K14Q8NGD5 310 aa13.54□□□□□ -0.24
NOP56-220ENST00000616692 OR5AK3PQ8NH89 298 aa13.54□□□□□ -0.24
NOP56-220ENST00000616692 ZNF775Q96BV0 537 aaPredicted RBP13.54□□□□□ -0.24
NOP56-220ENST00000616692 OR7D2Q96RA2 312 aa13.54□□□□□ -0.24
NOP56-220ENST00000616692 SLC39A8Q9C0K1 460 aa13.54□□□□□ -0.24
NOP56-220ENST00000616692 VCX2Q9H322 139 aa13.54□□□□□ -0.24
NOP56-220ENST00000616692 ZDHHC6Q9H6R6 413 aa13.54□□□□□ -0.24
NOP56-220ENST00000616692 P2RX2Q9UBL9 471 aa13.54□□□□□ -0.24
NOP56-220ENST00000616692 PLXNA2O75051 1894 aa13.54□□□□□ -0.24
NOP56-220ENST00000616692 NYNRINQ9P2P1 1898 aaKnown RBP13.54□□□□□ -0.24
NOP56-220ENST00000616692 ZNF354AO60765 605 aaPredicted RBP13.54□□□□□ -0.24
NOP56-220ENST00000616692 GASTP01350 101 aa13.54□□□□□ -0.24
NOP56-220ENST00000616692 HES3Q5TGS1 186 aa13.54□□□□□ -0.24
NOP56-220ENST00000616692 NCBP2-AS2Q69YL0 99 aa13.54□□□□□ -0.24
NOP56-220ENST00000616692 TMED4Q7Z7H5 227 aa13.54□□□□□ -0.24
NOP56-220ENST00000616692 SUMF2Q8NBJ7 301 aa13.54□□□□□ -0.24
NOP56-220ENST00000616692 GEMIN6Q8WXD5 167 aaKnown RBP13.54□□□□□ -0.24
NOP56-220ENST00000616692 DCUN1D4Q92564 292 aa13.54□□□□□ -0.24
NOP56-220ENST00000616692 SEC22AQ96IW7 307 aa13.54□□□□□ -0.24
NOP56-220ENST00000616692 DOHHQ9BU89 302 aa13.54□□□□□ -0.24
NOP56-220ENST00000616692 PRM3Q9NNZ6 103 aa13.54□□□□□ -0.24
NOP56-220ENST00000616692 GXYLT2A0PJZ3 443 aa13.53□□□□□ -0.24
NOP56-220ENST00000616692 H3BQ15 152 aa13.53□□□□□ -0.24
NOP56-220ENST00000616692 GAPDHSO14556 408 aaPredicted RBP13.53□□□□□ -0.24
NOP56-220ENST00000616692 ARPC3O15145 178 aa13.53□□□□□ -0.24
NOP56-220ENST00000616692 DUS4LO95620 317 aaKnown RBP13.53□□□□□ -0.24
NOP56-220ENST00000616692 IFNA5P01569 189 aa13.53□□□□□ -0.24
NOP56-220ENST00000616692 AKR1C4P17516 323 aa13.53□□□□□ -0.24
NOP56-220ENST00000616692 SGSHP51688 502 aa13.53□□□□□ -0.24
NOP56-220ENST00000616692 PLAURQ03405 335 aa13.53□□□□□ -0.24
NOP56-220ENST00000616692 FAM71F2Q6NXP2 309 aa13.53□□□□□ -0.24
NOP56-220ENST00000616692 SLC7A13Q8TCU3 470 aa13.53□□□□□ -0.24
NOP56-220ENST00000616692 WFDC5Q8TCV5 224 aa13.53□□□□□ -0.24
NOP56-220ENST00000616692 GPX8Q8TED1 209 aa13.53□□□□□ -0.24
NOP56-220ENST00000616692 ANKRD9Q96BM1 317 aaPredicted RBP13.53□□□□□ -0.24
NOP56-220ENST00000616692 CLMPQ9H6B4 373 aa13.53□□□□□ -0.24
NOP56-220ENST00000616692 CGGBP1Q9UFW8 167 aaPredicted RBP13.53□□□□□ -0.24
NOP56-220ENST00000616692 TLX2O43763 284 aaPredicted RBP13.53□□□□□ -0.24
NOP56-220ENST00000616692 TMPRSS11DO60235 418 aa13.53□□□□□ -0.24
NOP56-220ENST00000616692 WISP3O95389 354 aaPredicted RBP13.53□□□□□ -0.24
NOP56-220ENST00000616692 ALPPL2P10696 532 aa13.53□□□□□ -0.24
NOP56-220ENST00000616692 HNRNPA3P51991 378 aaKnown RBP13.53□□□□□ -0.24
NOP56-220ENST00000616692 P2RY6Q15077 328 aa13.53□□□□□ -0.24
NOP56-220ENST00000616692 MIDNQ504T8 468 aa13.53□□□□□ -0.24
NOP56-220ENST00000616692 FAM102AQ5T9C2 384 aaPredicted RBP13.53□□□□□ -0.24
NOP56-220ENST00000616692 SERPINA9Q86WD7 417 aa13.53□□□□□ -0.24
NOP56-220ENST00000616692 DND1Q8IYX4 353 aaKnown RBP13.53□□□□□ -0.24
NOP56-220ENST00000616692 COX18Q8N8Q8 333 aa13.53□□□□□ -0.24
NOP56-220ENST00000616692 SIGMAR1Q99720 223 aa13.53□□□□□ -0.24
NOP56-220ENST00000616692 MTCH1Q9NZJ7 389 aa13.53□□□□□ -0.24
NOP56-220ENST00000616692 TUBD1Q9UJT1 453 aa13.53□□□□□ -0.24
NOP56-220ENST00000616692 A0A1W2PP55 124 aa13.52□□□□□ -0.24
NOP56-220ENST00000616692 OMGP23515 440 aa13.52□□□□□ -0.24
NOP56-220ENST00000616692 FAM3AP98173 230 aa13.52□□□□□ -0.24
NOP56-220ENST00000616692 ZP4Q12836 540 aa13.52□□□□□ -0.24
NOP56-220ENST00000616692 IFI44LQ53G44 452 aa13.52□□□□□ -0.24
NOP56-220ENST00000616692 CDCP2Q5VXM1 449 aa13.52□□□□□ -0.24
NOP56-220ENST00000616692 TMEM207Q6UWW9 146 aa13.52□□□□□ -0.24
NOP56-220ENST00000616692 ZNF101Q8IZC7 436 aa13.52□□□□□ -0.24
NOP56-220ENST00000616692 CMTM4Q8IZR5 234 aa13.52□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms