RNA–Protein interactions for RNA: ENST00000616325.1

PCDHA11-202, Transcript of protocadherin alpha 11, humanhuman

APPRIS ALT2 BASIC

Gene PCDHA11, Length 3,418 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA11-202ENST00000616325 ZNF775Q96BV0 537 aaPredicted RBP11.83□□□□□ -0.52
PCDHA11-202ENST00000616325 TMEM68Q96MH6 324 aa11.83□□□□□ -0.52
PCDHA11-202ENST00000616325 CRISPLD2Q9H0B8 497 aa11.83□□□□□ -0.52
PCDHA11-202ENST00000616325 POMT1Q9Y6A1 747 aa11.83□□□□□ -0.52
PCDHA11-202ENST00000616325 EN2P19622 333 aaPredicted RBP11.83□□□□□ -0.52
PCDHA11-202ENST00000616325 PHLDA2Q53GA4 152 aa11.83□□□□□ -0.52
PCDHA11-202ENST00000616325 FAM69BQ5VUD6 431 aa11.83□□□□□ -0.52
PCDHA11-202ENST00000616325 NECAP1Q8NC96 275 aa11.83□□□□□ -0.52
PCDHA11-202ENST00000616325 SCGB3A2Q96PL1 93 aa11.83□□□□□ -0.52
PCDHA11-202ENST00000616325 BCO1Q9HAY6 547 aa11.83□□□□□ -0.52
PCDHA11-202ENST00000616325 COPS7AQ9UBW8 275 aa11.83□□□□□ -0.52
PCDHA11-202ENST00000616325 MRPS28Q9Y2Q9 187 aaKnown RBP11.83□□□□□ -0.52
PCDHA11-202ENST00000616325 FAM221BA6H8Z2 402 aa11.82□□□□□ -0.52
PCDHA11-202ENST00000616325 GABRG2P18507 467 aa11.82□□□□□ -0.52
PCDHA11-202ENST00000616325 PGCP20142 388 aa11.82□□□□□ -0.52
PCDHA11-202ENST00000616325 SFTPDP35247 375 aa11.82□□□□□ -0.52
PCDHA11-202ENST00000616325 OR3A4PP47883 348 aa11.82□□□□□ -0.52
PCDHA11-202ENST00000616325 PCP4P48539 62 aa11.82□□□□□ -0.52
PCDHA11-202ENST00000616325 BATFQ16520 125 aa11.82□□□□□ -0.52
PCDHA11-202ENST00000616325 ZNF880Q6PDB4 577 aa11.82□□□□□ -0.52
PCDHA11-202ENST00000616325 NUP54Q7Z3B4 507 aa11.82□□□□□ -0.52
PCDHA11-202ENST00000616325 CATSPERDQ86XM0 798 aa11.82□□□□□ -0.52
PCDHA11-202ENST00000616325 SGPP2Q8IWX5 399 aa11.82□□□□□ -0.52
PCDHA11-202ENST00000616325 HIST3H2BBQ8N257 126 aa11.82□□□□□ -0.52
PCDHA11-202ENST00000616325 SLC22A24Q8N4F4 322 aa11.82□□□□□ -0.52
PCDHA11-202ENST00000616325 TMEM217Q8N7C4 229 aa11.82□□□□□ -0.52
PCDHA11-202ENST00000616325 OR2G3Q8NGZ4 309 aa11.82□□□□□ -0.52
PCDHA11-202ENST00000616325 MUCL1Q96DR8 90 aa11.82□□□□□ -0.52
PCDHA11-202ENST00000616325 KLHDC7BQ96G42 594 aa11.82□□□□□ -0.52
PCDHA11-202ENST00000616325 TMEM59Q9BXS4 323 aa11.82□□□□□ -0.52
PCDHA11-202ENST00000616325 B3GALT5Q9Y2C3 310 aa11.82□□□□□ -0.52
PCDHA11-202ENST00000616325 KCNIP3Q9Y2W7 256 aa11.82□□□□□ -0.52
PCDHA11-202ENST00000616325 EPOPA6NHQ4 379 aa11.82□□□□□ -0.52
PCDHA11-202ENST00000616325 NUDT21O43809 227 aaKnown RBP11.82□□□□□ -0.52
PCDHA11-202ENST00000616325 ZNF217O75362 1048 aa11.82□□□□□ -0.52
PCDHA11-202ENST00000616325 RAD51DO75771 328 aa11.82□□□□□ -0.52
PCDHA11-202ENST00000616325 BIDP55957 195 aa11.82□□□□□ -0.52
PCDHA11-202ENST00000616325 FUT7Q11130 342 aa11.82□□□□□ -0.52
PCDHA11-202ENST00000616325 PLAC9Q5JTB6 97 aa11.82□□□□□ -0.52
PCDHA11-202ENST00000616325 TEX30Q5JUR7 227 aa11.82□□□□□ -0.52
PCDHA11-202ENST00000616325 WDFY1Q8IWB7 410 aa11.82□□□□□ -0.52
PCDHA11-202ENST00000616325 TMEM156Q8N614 296 aa11.82□□□□□ -0.52
PCDHA11-202ENST00000616325 CYB561D1Q8N8Q1 229 aa11.82□□□□□ -0.52
PCDHA11-202ENST00000616325 PHOSPHO2Q8TCD6 241 aa11.82□□□□□ -0.52
PCDHA11-202ENST00000616325 HAS2Q92819 552 aa11.82□□□□□ -0.52
PCDHA11-202ENST00000616325 PMM1Q92871 262 aa11.82□□□□□ -0.52
PCDHA11-202ENST00000616325 WFIKKN1Q96NZ8 548 aa11.82□□□□□ -0.52
PCDHA11-202ENST00000616325 C1orf123Q9NWV4 160 aa11.82□□□□□ -0.52
PCDHA11-202ENST00000616325 SHANK1Q9Y566 2161 aa11.82□□□□□ -0.52
PCDHA11-202ENST00000616325 KIR2DS5A0A0G2JLQ3 304 aa11.82□□□□□ -0.52
PCDHA11-202ENST00000616325 A0A0G2JNG1 304 aa11.82□□□□□ -0.52
PCDHA11-202ENST00000616325 KIR2DS3K7RE56 304 aa11.82□□□□□ -0.52
PCDHA11-202ENST00000616325 KIR2DS5Q14953 304 aa11.82□□□□□ -0.52
PCDHA11-202ENST00000616325 MEX3BQ6ZN04 569 aaKnown RBP11.82□□□□□ -0.52
PCDHA11-202ENST00000616325 GPX7Q96SL4 187 aaPredicted RBP11.82□□□□□ -0.52
PCDHA11-202ENST00000616325 NIPSNAP3BQ9BS92 247 aa11.82□□□□□ -0.52
PCDHA11-202ENST00000616325 LRRC61Q9BV99 259 aa11.82□□□□□ -0.52
PCDHA11-202ENST00000616325 FBRSQ9HAH7 460 aa11.82□□□□□ -0.52
PCDHA11-202ENST00000616325 WFDC1Q9HC57 220 aa11.82□□□□□ -0.52
PCDHA11-202ENST00000616325 CLDN16Q9Y5I7 305 aa11.82□□□□□ -0.52
PCDHA11-202ENST00000616325 C2orf16Q68DN1 1984 aa11.81□□□□□ -0.52
PCDHA11-202ENST00000616325 MMP9P14780 707 aa11.81□□□□□ -0.52
PCDHA11-202ENST00000616325 BLVRBP30043 206 aaPredicted RBP11.81□□□□□ -0.52
PCDHA11-202ENST00000616325 ALDH3B1P43353 468 aa11.81□□□□□ -0.52
PCDHA11-202ENST00000616325 FZD2Q14332 565 aa11.81□□□□□ -0.52
PCDHA11-202ENST00000616325 HNF4GQ14541 408 aa11.81□□□□□ -0.52
PCDHA11-202ENST00000616325 ELOBQ15370 118 aa11.81□□□□□ -0.52
PCDHA11-202ENST00000616325 PHF19Q5T6S3 580 aa11.81□□□□□ -0.52
PCDHA11-202ENST00000616325 OR5D14Q8NGL3 314 aa11.81□□□□□ -0.52
PCDHA11-202ENST00000616325 FAM210BQ96KR6 192 aa11.81□□□□□ -0.52
PCDHA11-202ENST00000616325 ZNF2Q9BSG1 426 aaPredicted RBP11.81□□□□□ -0.52
PCDHA11-202ENST00000616325 IL17BQ9UHF5 180 aa11.81□□□□□ -0.52
PCDHA11-202ENST00000616325 DANCRP0C864 163 aa11.81□□□□□ -0.52
PCDHA11-202ENST00000616325 COX5BP10606 129 aa11.81□□□□□ -0.52
PCDHA11-202ENST00000616325 FAM3AP98173 230 aa11.81□□□□□ -0.52
PCDHA11-202ENST00000616325 C1orf53Q5VUE5 145 aa11.81□□□□□ -0.52
PCDHA11-202ENST00000616325 TCEAL6Q6IPX3 200 aa11.81□□□□□ -0.52
PCDHA11-202ENST00000616325 DTWD2Q8NBA8 298 aa11.81□□□□□ -0.52
PCDHA11-202ENST00000616325 CUTCQ9NTM9 273 aa11.81□□□□□ -0.52
PCDHA11-202ENST00000616325 OR14J1Q9UGF5 321 aa11.81□□□□□ -0.52
PCDHA11-202ENST00000616325 SUSD2Q9UGT4 822 aa11.81□□□□□ -0.52
PCDHA11-202ENST00000616325 R4GMQ9 66 aa11.81□□□□□ -0.52
PCDHA11-202ENST00000616325 A0A1W2PNR3 127 aa11.8□□□□□ -0.52
PCDHA11-202ENST00000616325 FAM221AA4D161 298 aa11.8□□□□□ -0.52
PCDHA11-202ENST00000616325 RBFOX3A6NFN3 312 aa11.8□□□□□ -0.52
PCDHA11-202ENST00000616325 IL33O95760 270 aa11.8□□□□□ -0.52
PCDHA11-202ENST00000616325 FOXK1P85037 733 aa11.8□□□□□ -0.52
PCDHA11-202ENST00000616325 ABCA11PQ4W5N1 156 aa11.8□□□□□ -0.52
PCDHA11-202ENST00000616325 RTL10Q7L3V2 364 aa11.8□□□□□ -0.52
PCDHA11-202ENST00000616325 MTIF3Q9H2K0 278 aaKnown RBP11.8□□□□□ -0.52
PCDHA11-202ENST00000616325 EREGO14944 169 aa11.8□□□□□ -0.52
PCDHA11-202ENST00000616325 BGLAPP02818 100 aa11.8□□□□□ -0.52
PCDHA11-202ENST00000616325 GABRR1P24046 479 aa11.8□□□□□ -0.52
PCDHA11-202ENST00000616325 OPRM1P35372 400 aa11.8□□□□□ -0.52
PCDHA11-202ENST00000616325 PTGER4P35408 488 aa11.8□□□□□ -0.52
PCDHA11-202ENST00000616325 PMELP40967 661 aa11.8□□□□□ -0.52
PCDHA11-202ENST00000616325 RABIFP47224 123 aa11.8□□□□□ -0.52
PCDHA11-202ENST00000616325 HSD17B7P56937 341 aa11.8□□□□□ -0.52
PCDHA11-202ENST00000616325 SLC26A5P58743 744 aa11.8□□□□□ -0.52
PCDHA11-202ENST00000616325 RAB11AP62491 216 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms