RNA–Protein interactions for RNA: ENST00000616074.4

TRAPPC3-208, Transcript of trafficking protein particle complex 3, humanhuman

TSL 5 BASIC

Gene TRAPPC3, Length 1,114 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-208ENST00000616074 OR4C13Q8NGP0 309 aa16.88■□□□□ 0.29
TRAPPC3-208ENST00000616074 OR5K1Q8NHB7 308 aa16.88■□□□□ 0.29
TRAPPC3-208ENST00000616074 TEX12Q9BXU0 123 aa16.88■□□□□ 0.29
TRAPPC3-208ENST00000616074 C1orf21Q9H246 121 aa16.88■□□□□ 0.29
TRAPPC3-208ENST00000616074 NUFIP1Q9UHK0 495 aaKnown RBP16.88■□□□□ 0.29
TRAPPC3-208ENST00000616074 MEGF11A6BM72 1044 aa16.87■□□□□ 0.29
TRAPPC3-208ENST00000616074 ZNF254O75437 659 aa16.87■□□□□ 0.29
TRAPPC3-208ENST00000616074 DHRS3O75911 302 aa16.87■□□□□ 0.29
TRAPPC3-208ENST00000616074 NRASP01111 189 aa16.87■□□□□ 0.29
TRAPPC3-208ENST00000616074 PGA5P0DJD9 388 aa16.87■□□□□ 0.29
TRAPPC3-208ENST00000616074 HAAOP46952 286 aa16.87■□□□□ 0.29
TRAPPC3-208ENST00000616074 BMXP51813 675 aa16.87■□□□□ 0.29
TRAPPC3-208ENST00000616074 RIDAP52758 137 aaKnown RBP16.87■□□□□ 0.29
TRAPPC3-208ENST00000616074 ERVFRD-1P60508 538 aa16.87■□□□□ 0.29
TRAPPC3-208ENST00000616074 RPL31P62899 125 aaKnown RBP16.87■□□□□ 0.29
TRAPPC3-208ENST00000616074 AANATQ16613 207 aa16.87■□□□□ 0.29
TRAPPC3-208ENST00000616074 ZNF684Q5T5D7 378 aa16.87■□□□□ 0.29
TRAPPC3-208ENST00000616074 LCN1P1Q5VSP4 162 aa16.87■□□□□ 0.29
TRAPPC3-208ENST00000616074 TMEM200BQ69YZ2 307 aa16.87■□□□□ 0.29
TRAPPC3-208ENST00000616074 BATF2Q8N1L9 274 aa16.87■□□□□ 0.29
TRAPPC3-208ENST00000616074 ZNF561Q8N587 486 aa16.87■□□□□ 0.29
TRAPPC3-208ENST00000616074 C11orf44Q8N8P7 122 aa16.87■□□□□ 0.29
TRAPPC3-208ENST00000616074 OR4M1Q8NGD0 313 aa16.87■□□□□ 0.29
TRAPPC3-208ENST00000616074 IKZF2Q9UKS7 526 aa16.87■□□□□ 0.29
TRAPPC3-208ENST00000616074 G3V4G9 280 aa16.86■□□□□ 0.29
TRAPPC3-208ENST00000616074 J3QT63 122 aa16.86■□□□□ 0.29
TRAPPC3-208ENST00000616074 SLC1A7O00341 560 aa16.86■□□□□ 0.29
TRAPPC3-208ENST00000616074 PLXNB1O43157 2135 aa16.86■□□□□ 0.29
TRAPPC3-208ENST00000616074 CHST1O43916 411 aa16.86■□□□□ 0.29
TRAPPC3-208ENST00000616074 TTRP02766 147 aa16.86■□□□□ 0.29
TRAPPC3-208ENST00000616074 CCL3L1P16619 93 aa16.86■□□□□ 0.29
TRAPPC3-208ENST00000616074 COX7A1P24310 79 aa16.86■□□□□ 0.29
TRAPPC3-208ENST00000616074 PRDX2P32119 198 aa16.86■□□□□ 0.29
TRAPPC3-208ENST00000616074 CBX1P83916 185 aa16.86■□□□□ 0.29
TRAPPC3-208ENST00000616074 C11orf88Q6PI97 169 aa16.86■□□□□ 0.29
TRAPPC3-208ENST00000616074 KLHDC1Q8N7A1 406 aa16.86■□□□□ 0.29
TRAPPC3-208ENST00000616074 CCDC197Q8NCU1 140 aa16.86■□□□□ 0.29
TRAPPC3-208ENST00000616074 OR2T6Q8NHC8 308 aa16.86■□□□□ 0.29
TRAPPC3-208ENST00000616074 ASB17Q8WXJ9 295 aa16.86■□□□□ 0.29
TRAPPC3-208ENST00000616074 RANBP3Q9H6Z4 567 aaPredicted RBP16.86■□□□□ 0.29
TRAPPC3-208ENST00000616074 HEXA-AS1Q9H8Q6 139 aa16.86■□□□□ 0.29
TRAPPC3-208ENST00000616074 RAB18Q9NP72 206 aa16.86■□□□□ 0.29
TRAPPC3-208ENST00000616074 GPR173Q9NS66 373 aa16.86■□□□□ 0.29
TRAPPC3-208ENST00000616074 TMEM14AQ9Y6G1 99 aa16.86■□□□□ 0.29
TRAPPC3-208ENST00000616074 A0A1W2PPH5 198 aa16.85■□□□□ 0.29
TRAPPC3-208ENST00000616074 SRSF10O75494 262 aaKnown RBP16.85■□□□□ 0.29
TRAPPC3-208ENST00000616074 HOXB6P17509 224 aaKnown RBP16.85■□□□□ 0.29
TRAPPC3-208ENST00000616074 CRISP1P54107 249 aa16.85■□□□□ 0.29
TRAPPC3-208ENST00000616074 ZNF273Q14593 569 aa16.85■□□□□ 0.29
TRAPPC3-208ENST00000616074 ZNF573Q86YE8 665 aa16.85■□□□□ 0.29
TRAPPC3-208ENST00000616074 OR2T27Q8NH04 317 aa16.85■□□□□ 0.29
TRAPPC3-208ENST00000616074 PIFOQ8TCI5 191 aa16.85■□□□□ 0.29
TRAPPC3-208ENST00000616074 CFHR4Q92496 578 aa16.85■□□□□ 0.29
TRAPPC3-208ENST00000616074 CNN2Q99439 309 aaKnown RBP16.85■□□□□ 0.29
TRAPPC3-208ENST00000616074 USE1Q9NZ43 259 aa16.85■□□□□ 0.29
TRAPPC3-208ENST00000616074 DNAJB9Q9UBS3 223 aa16.85■□□□□ 0.29
TRAPPC3-208ENST00000616074 GTF2A1LQ9UNN4 478 aa16.85■□□□□ 0.29
TRAPPC3-208ENST00000616074 PQLC2LA1A4F0 135 aa16.84■□□□□ 0.29
TRAPPC3-208ENST00000616074 MAGEB4O15481 346 aaPredicted RBP16.84■□□□□ 0.29
TRAPPC3-208ENST00000616074 PRKYO43930 277 aa16.84■□□□□ 0.29
TRAPPC3-208ENST00000616074 NOS1APO75052 506 aaPredicted RBP16.84■□□□□ 0.29
TRAPPC3-208ENST00000616074 FKBP6O75344 327 aa16.84■□□□□ 0.29
TRAPPC3-208ENST00000616074 NXPH2O95156 264 aa16.84■□□□□ 0.29
TRAPPC3-208ENST00000616074 BEAN1Q3B7T3 259 aa16.84■□□□□ 0.29
TRAPPC3-208ENST00000616074 CLVS2Q5SYC1 327 aa16.84■□□□□ 0.29
TRAPPC3-208ENST00000616074 TMEM42Q69YG0 159 aa16.84■□□□□ 0.29
TRAPPC3-208ENST00000616074 ZNF782Q6ZMW2 699 aaPredicted RBP16.84■□□□□ 0.29
TRAPPC3-208ENST00000616074 BCDIN3DQ7Z5W3 292 aaKnown RBP16.84■□□□□ 0.29
TRAPPC3-208ENST00000616074 SPATA24Q86W54 205 aa16.84■□□□□ 0.29
TRAPPC3-208ENST00000616074 APOL4Q9BPW4 351 aa16.84■□□□□ 0.29
TRAPPC3-208ENST00000616074 NRIP2Q9BQI9 281 aa16.84■□□□□ 0.29
TRAPPC3-208ENST00000616074 PAPOLBQ9NRJ5 636 aaKnown RBP16.84■□□□□ 0.29
TRAPPC3-208ENST00000616074 OR14J1Q9UGF5 321 aa16.84■□□□□ 0.29
TRAPPC3-208ENST00000616074 POLDIP2Q9Y2S7 368 aa16.84■□□□□ 0.29
TRAPPC3-208ENST00000616074 V9GYS6 101 aa16.84■□□□□ 0.29
TRAPPC3-208ENST00000616074 A6NIN4 97 aa16.83■□□□□ 0.28
TRAPPC3-208ENST00000616074 LOC110117498-PIK3R3F6TDL0 507 aa16.83■□□□□ 0.28
TRAPPC3-208ENST00000616074 FAM107AO95990 144 aa16.83■□□□□ 0.28
TRAPPC3-208ENST00000616074 OPN1MWP04001 364 aa16.83■□□□□ 0.28
TRAPPC3-208ENST00000616074 TK1P04183 234 aa16.83■□□□□ 0.28
TRAPPC3-208ENST00000616074 OPN1MW2P0DN77 364 aa16.83■□□□□ 0.28
TRAPPC3-208ENST00000616074 OPN1MW3P0DN78 364 aa16.83■□□□□ 0.28
TRAPPC3-208ENST00000616074 LGALS4P56470 323 aa16.83■□□□□ 0.28
TRAPPC3-208ENST00000616074 CXCR4P61073 352 aa16.83■□□□□ 0.28
TRAPPC3-208ENST00000616074 ESRRGP62508 458 aa16.83■□□□□ 0.28
TRAPPC3-208ENST00000616074 FLOT2Q14254 428 aa16.83■□□□□ 0.28
TRAPPC3-208ENST00000616074 PTGES3Q15185 160 aaKnown RBP16.83■□□□□ 0.28
TRAPPC3-208ENST00000616074 ZNF322Q6U7Q0 402 aaPredicted RBP16.83■□□□□ 0.28
TRAPPC3-208ENST00000616074 LIAT1Q6ZQX7 453 aa16.83■□□□□ 0.28
TRAPPC3-208ENST00000616074 PLEKHG7Q6ZR37 379 aa16.83■□□□□ 0.28
TRAPPC3-208ENST00000616074 ASRGL1Q7L266 308 aa16.83■□□□□ 0.28
TRAPPC3-208ENST00000616074 LHFPL4Q7Z7J7 247 aa16.83■□□□□ 0.28
TRAPPC3-208ENST00000616074 DSCAML1Q8TD84 2053 aa16.83■□□□□ 0.28
TRAPPC3-208ENST00000616074 NPFFR1Q9GZQ6 430 aa16.83■□□□□ 0.28
TRAPPC3-208ENST00000616074 MOB1AQ9H8S9 216 aa16.83■□□□□ 0.28
TRAPPC3-208ENST00000616074 HES4Q9HCC6 221 aa16.83■□□□□ 0.28
TRAPPC3-208ENST00000616074 R4GMQ9 66 aa16.83■□□□□ 0.28
TRAPPC3-208ENST00000616074 A0A1B0GTI1 187 aa16.82■□□□□ 0.28
TRAPPC3-208ENST00000616074 hCG_1809904A0A1W2PP81 198 aa16.82■□□□□ 0.28
TRAPPC3-208ENST00000616074 A0A1W2PPE2 198 aa16.82■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms