RNA–Protein interactions for RNA: ENST00000615393.5

VEGFA-227, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 984 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-227ENST00000615393 USE1Q9NZ43 259 aa20.73■□□□□ 0.91
VEGFA-227ENST00000615393 CAB39Q9Y376 341 aaPredicted RBP20.73■□□□□ 0.91
VEGFA-227ENST00000615393 FAM96BQ9Y3D0 163 aa20.73■□□□□ 0.91
VEGFA-227ENST00000615393 PQLC2LA1A4F0 135 aa20.72■□□□□ 0.91
VEGFA-227ENST00000615393 FAM181BA6NEQ2 426 aa20.72■□□□□ 0.91
VEGFA-227ENST00000615393 M0R1W7 72 aa20.72■□□□□ 0.91
VEGFA-227ENST00000615393 PGA5P0DJD9 388 aa20.72■□□□□ 0.91
VEGFA-227ENST00000615393 EEF1B2P24534 225 aaKnown RBP20.72■□□□□ 0.91
VEGFA-227ENST00000615393 BLMHQ13867 455 aa20.72■□□□□ 0.91
VEGFA-227ENST00000615393 ODF4Q2M2E3 257 aa20.72■□□□□ 0.91
VEGFA-227ENST00000615393 FIP1L1Q6UN15 594 aaKnown RBP20.72■□□□□ 0.91
VEGFA-227ENST00000615393 C1orf122Q6ZSJ8 110 aa20.72■□□□□ 0.91
VEGFA-227ENST00000615393 C10orf67Q8IYJ2 551 aa20.72■□□□□ 0.91
VEGFA-227ENST00000615393 Q8N7P7 452 aa20.72■□□□□ 0.91
VEGFA-227ENST00000615393 ZNRF1Q8ND25 227 aa20.72■□□□□ 0.91
VEGFA-227ENST00000615393 CCDC54Q8NEL0 328 aa20.72■□□□□ 0.91
VEGFA-227ENST00000615393 RORBQ92753 470 aa20.72■□□□□ 0.91
VEGFA-227ENST00000615393 SDSLQ96GA7 329 aa20.72■□□□□ 0.91
VEGFA-227ENST00000615393 ADI1Q9BV57 179 aa20.72■□□□□ 0.91
VEGFA-227ENST00000615393 CHIAQ9BZP6 476 aa20.72■□□□□ 0.91
VEGFA-227ENST00000615393 MAB21L2Q9Y586 359 aa20.72■□□□□ 0.91
VEGFA-227ENST00000615393 TRBV23-1A0A0A0MS06 115 aa20.71■□□□□ 0.91
VEGFA-227ENST00000615393 A6NIN4 97 aa20.71■□□□□ 0.91
VEGFA-227ENST00000615393 EI24O14681 340 aa20.71■□□□□ 0.91
VEGFA-227ENST00000615393 SYT7O43581 403 aa20.71■□□□□ 0.91
VEGFA-227ENST00000615393 SYNGR1O43759 233 aa20.71■□□□□ 0.91
VEGFA-227ENST00000615393 NOS1APO75052 506 aaPredicted RBP20.71■□□□□ 0.91
VEGFA-227ENST00000615393 CAPZA1P52907 286 aa20.71■□□□□ 0.91
VEGFA-227ENST00000615393 LDLRAD3Q86YD5 345 aa20.71■□□□□ 0.91
VEGFA-227ENST00000615393 PIP4P2Q8N4L2 257 aa20.71■□□□□ 0.91
VEGFA-227ENST00000615393 HRASLS5Q96KN8 279 aa20.71■□□□□ 0.91
VEGFA-227ENST00000615393 SLC7A11Q9UPY5 501 aa20.71■□□□□ 0.91
VEGFA-227ENST00000615393 ANKRD61A6NGH8 418 aa20.7■□□□□ 0.9
VEGFA-227ENST00000615393 RFPL4AA6NLU0 287 aa20.7■□□□□ 0.9
VEGFA-227ENST00000615393 RFPL4AL1F8VTS6 287 aa20.7■□□□□ 0.9
VEGFA-227ENST00000615393 H3BNX3 289 aa20.7■□□□□ 0.9
VEGFA-227ENST00000615393 NXPH2O95156 264 aa20.7■□□□□ 0.9
VEGFA-227ENST00000615393 ALDH3A2P51648 485 aa20.7■□□□□ 0.9
VEGFA-227ENST00000615393 NCR3LG1Q68D85 454 aa20.7■□□□□ 0.9
VEGFA-227ENST00000615393 TAF15Q92804 592 aaKnown RBP eCLIP20.7■□□□□ 0.9
VEGFA-227ENST00000615393 ZNF488Q96MN9 340 aa20.7■□□□□ 0.9
VEGFA-227ENST00000615393 METTL8Q9H825 291 aaKnown RBP20.7■□□□□ 0.9
VEGFA-227ENST00000615393 GNG8Q9UK08 70 aa20.7■□□□□ 0.9
VEGFA-227ENST00000615393 A0A1B0GUS0 222 aa20.69■□□□□ 0.9
VEGFA-227ENST00000615393 RNASEK-C17orf49H0YIS7 233 aa20.69■□□□□ 0.9
VEGFA-227ENST00000615393 SLC1A7O00341 560 aa20.69■□□□□ 0.9
VEGFA-227ENST00000615393 GATBO75879 557 aaKnown RBP20.69■□□□□ 0.9
VEGFA-227ENST00000615393 FBP1P09467 338 aa20.69■□□□□ 0.9
VEGFA-227ENST00000615393 MDKP21741 143 aaPredicted RBP20.69■□□□□ 0.9
VEGFA-227ENST00000615393 OMGP23515 440 aa20.69■□□□□ 0.9
VEGFA-227ENST00000615393 MPZP25189 248 aa20.69■□□□□ 0.9
VEGFA-227ENST00000615393 RPL15P61313 204 aaKnown RBP20.69■□□□□ 0.9
VEGFA-227ENST00000615393 MEDAGQ5VYS4 303 aa20.69■□□□□ 0.9
VEGFA-227ENST00000615393 ZNF561Q8N587 486 aa20.69■□□□□ 0.9
VEGFA-227ENST00000615393 PKIBQ9C010 78 aa20.69■□□□□ 0.9
VEGFA-227ENST00000615393 DPAGT1Q9H3H5 408 aa20.69■□□□□ 0.9
VEGFA-227ENST00000615393 ELL3Q9HB65 397 aaPredicted RBP20.69■□□□□ 0.9
VEGFA-227ENST00000615393 MMP24Q9Y5R2 645 aa20.69■□□□□ 0.9
VEGFA-227ENST00000615393 NPFFO15130 113 aa20.68■□□□□ 0.9
VEGFA-227ENST00000615393 UBCP0CG48 685 aaKnown RBP20.68■□□□□ 0.9
VEGFA-227ENST00000615393 PRDX2P32119 198 aa20.68■□□□□ 0.9
VEGFA-227ENST00000615393 ACTC1P68032 377 aa20.68■□□□□ 0.9
VEGFA-227ENST00000615393 ACTA1P68133 377 aa20.68■□□□□ 0.9
VEGFA-227ENST00000615393 ZNF85Q03923 595 aa20.68■□□□□ 0.9
VEGFA-227ENST00000615393 SLC25A30Q5SVS4 291 aa20.68■□□□□ 0.9
VEGFA-227ENST00000615393 FAM185AQ8N0U4 392 aa20.68■□□□□ 0.9
VEGFA-227ENST00000615393 OR4F5Q8NH21 305 aa20.68■□□□□ 0.9
VEGFA-227ENST00000615393 TRMT10AQ8TBZ6 339 aaKnown RBP20.68■□□□□ 0.9
VEGFA-227ENST00000615393 DYRK2Q92630 601 aa20.68■□□□□ 0.9
VEGFA-227ENST00000615393 UBE2FQ969M7 185 aa20.68■□□□□ 0.9
VEGFA-227ENST00000615393 NRIP2Q9BQI9 281 aa20.68■□□□□ 0.9
VEGFA-227ENST00000615393 BEX1Q9HBH7 125 aa20.68■□□□□ 0.9
VEGFA-227ENST00000615393 FAM230AA0A1W2PPH8 454 aa20.67■□□□□ 0.9
VEGFA-227ENST00000615393 SNTNA6NMZ2 147 aa20.67■□□□□ 0.9
VEGFA-227ENST00000615393 H3BSH0 61 aa20.67■□□□□ 0.9
VEGFA-227ENST00000615393 SPRY1O43609 319 aaPredicted RBP20.67■□□□□ 0.9
VEGFA-227ENST00000615393 ENTPD6O75354 484 aa20.67■□□□□ 0.9
VEGFA-227ENST00000615393 IGHV4-59P01825 116 aa20.67■□□□□ 0.9
VEGFA-227ENST00000615393 IER3P46695 156 aa20.67■□□□□ 0.9
VEGFA-227ENST00000615393 UBE2E1P51965 193 aa20.67■□□□□ 0.9
VEGFA-227ENST00000615393 RAG2P55895 527 aa20.67■□□□□ 0.9
VEGFA-227ENST00000615393 ISL1P61371 349 aa20.67■□□□□ 0.9
VEGFA-227ENST00000615393 SNRPGP62308 76 aaKnown RBP20.67■□□□□ 0.9
VEGFA-227ENST00000615393 PRB3Q04118 309 aaPredicted RBP20.67■□□□□ 0.9
VEGFA-227ENST00000615393 IL24Q13007 206 aa20.67■□□□□ 0.9
VEGFA-227ENST00000615393 KLRD1Q13241 179 aa20.67■□□□□ 0.9
VEGFA-227ENST00000615393 ZIK1Q3SY52 487 aaPredicted RBP20.67■□□□□ 0.9
VEGFA-227ENST00000615393 TP53I3Q53FA7 332 aa20.67■□□□□ 0.9
VEGFA-227ENST00000615393 KCTD20Q7Z5Y7 419 aa20.67■□□□□ 0.9
VEGFA-227ENST00000615393 PRSS35Q8N3Z0 413 aa20.67■□□□□ 0.9
VEGFA-227ENST00000615393 CD177Q8N6Q3 437 aa20.67■□□□□ 0.9
VEGFA-227ENST00000615393 OR5D13Q8NGL4 314 aa20.67■□□□□ 0.9
VEGFA-227ENST00000615393 TNFRSF14Q92956 283 aa20.67■□□□□ 0.9
VEGFA-227ENST00000615393 C10orf35Q96D05 121 aa20.67■□□□□ 0.9
VEGFA-227ENST00000615393 RNFT2Q96EX2 444 aa20.67■□□□□ 0.9
VEGFA-227ENST00000615393 SLITRK2Q9H156 845 aa20.67■□□□□ 0.9
VEGFA-227ENST00000615393 A0A1W2PPH5 198 aa20.66■□□□□ 0.9
VEGFA-227ENST00000615393 H0YAE9 185 aa20.66■□□□□ 0.9
VEGFA-227ENST00000615393 NDUFA7O95182 113 aa20.66■□□□□ 0.9
VEGFA-227ENST00000615393 SERPINA3P01011 423 aa20.66■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms