RNA–Protein interactions for RNA: ENST00000612899.4

TNFAIP3-206, Transcript of TNF alpha induced protein 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TNFAIP3, Length 4,735 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-206ENST00000612899 FOXS1O43638 330 aa11.14□□□□□ -0.63
TNFAIP3-206ENST00000612899 TXNDC12O95881 172 aa11.14□□□□□ -0.63
TNFAIP3-206ENST00000612899 IGHV4-34P06331 123 aa11.14□□□□□ -0.63
TNFAIP3-206ENST00000612899 MESTQ5EB52 335 aa11.14□□□□□ -0.63
TNFAIP3-206ENST00000612899 ABLIM2Q6H8Q1 611 aa11.14□□□□□ -0.63
TNFAIP3-206ENST00000612899 OR2Y1Q8NGV0 311 aa11.14□□□□□ -0.63
TNFAIP3-206ENST00000612899 SARGQ9BW04 601 aa11.14□□□□□ -0.63
TNFAIP3-206ENST00000612899 PLEKHA2Q9HB19 425 aa11.14□□□□□ -0.63
TNFAIP3-206ENST00000612899 GNG13Q9P2W3 67 aa11.14□□□□□ -0.63
TNFAIP3-206ENST00000612899 V9GYS6 101 aa11.14□□□□□ -0.63
TNFAIP3-206ENST00000612899 TERTO14746 1132 aaKnown RBP11.13□□□□□ -0.63
TNFAIP3-206ENST00000612899 CCL2P13500 99 aa11.13□□□□□ -0.63
TNFAIP3-206ENST00000612899 MEOX1P50221 254 aa11.13□□□□□ -0.63
TNFAIP3-206ENST00000612899 GNG3P63215 75 aa11.13□□□□□ -0.63
TNFAIP3-206ENST00000612899 S1PR3Q99500 378 aa11.13□□□□□ -0.63
TNFAIP3-206ENST00000612899 PATZ1Q9HBE1 687 aaKnown RBP11.13□□□□□ -0.63
TNFAIP3-206ENST00000612899 KCNIP2Q9NS61 270 aa11.13□□□□□ -0.63
TNFAIP3-206ENST00000612899 HIF1ANQ9NWT6 349 aa11.13□□□□□ -0.63
TNFAIP3-206ENST00000612899 SRD5A2P31213 254 aa11.13□□□□□ -0.63
TNFAIP3-206ENST00000612899 CD96P40200 585 aa11.13□□□□□ -0.63
TNFAIP3-206ENST00000612899 SPINK14Q6IE38 97 aa11.13□□□□□ -0.63
TNFAIP3-206ENST00000612899 RGS7BPQ6MZT1 257 aaPredicted RBP11.13□□□□□ -0.63
TNFAIP3-206ENST00000612899 OR10P1Q8NGE3 313 aa11.13□□□□□ -0.63
TNFAIP3-206ENST00000612899 PTPMT1Q8WUK0 201 aaPredicted RBP11.13□□□□□ -0.63
TNFAIP3-206ENST00000612899 ST6GAL2Q96JF0 529 aa11.13□□□□□ -0.63
TNFAIP3-206ENST00000612899 CMTM3Q96MX0 182 aa11.13□□□□□ -0.63
TNFAIP3-206ENST00000612899 NPAS1Q99742 590 aa11.13□□□□□ -0.63
TNFAIP3-206ENST00000612899 LIN7CQ9NUP9 197 aaKnown RBP11.13□□□□□ -0.63
TNFAIP3-206ENST00000612899 SPTAN1Q13813 2472 aaKnown RBP11.13□□□□□ -0.63
TNFAIP3-206ENST00000612899 AQP7O14520 342 aa11.13□□□□□ -0.63
TNFAIP3-206ENST00000612899 IL5P05113 134 aa11.13□□□□□ -0.63
TNFAIP3-206ENST00000612899 CT45A6P0DMU7 189 aa11.13□□□□□ -0.63
TNFAIP3-206ENST00000612899 CT45A5P0DMU8 189 aa11.13□□□□□ -0.63
TNFAIP3-206ENST00000612899 CT45A7P0DMV0 189 aa11.13□□□□□ -0.63
TNFAIP3-206ENST00000612899 ZNF250P15622 560 aa11.13□□□□□ -0.63
TNFAIP3-206ENST00000612899 HIST1H1DP16402 221 aaKnown RBP11.13□□□□□ -0.63
TNFAIP3-206ENST00000612899 FOXC1Q12948 553 aa11.13□□□□□ -0.63
TNFAIP3-206ENST00000612899 ST3GAL2Q16842 350 aa11.13□□□□□ -0.63
TNFAIP3-206ENST00000612899 CT45A1Q5HYN5 189 aa11.13□□□□□ -0.63
TNFAIP3-206ENST00000612899 TMEM88Q6PEY1 159 aa11.13□□□□□ -0.63
TNFAIP3-206ENST00000612899 C6orf201Q7Z4U5 140 aa11.13□□□□□ -0.63
TNFAIP3-206ENST00000612899 HSD17B13Q7Z5P4 300 aaPredicted RBP11.13□□□□□ -0.63
TNFAIP3-206ENST00000612899 CT45A3Q8NHU0 189 aa11.13□□□□□ -0.63
TNFAIP3-206ENST00000612899 GNPNAT1Q96EK6 184 aaPredicted RBP11.13□□□□□ -0.63
TNFAIP3-206ENST00000612899 TIMD4Q96H15 378 aa11.13□□□□□ -0.63
TNFAIP3-206ENST00000612899 NBASA2RRP1 2371 aa11.13□□□□□ -0.63
TNFAIP3-206ENST00000612899 IGKV1-8A0A0C4DH67 115 aa11.13□□□□□ -0.63
TNFAIP3-206ENST00000612899 A0A1W2PPH5 198 aa11.13□□□□□ -0.63
TNFAIP3-206ENST00000612899 TOX3O15405 576 aaPredicted RBP11.13□□□□□ -0.63
TNFAIP3-206ENST00000612899 MGST1P10620 155 aaKnown RBP11.13□□□□□ -0.63
TNFAIP3-206ENST00000612899 C1orf87Q8N0U7 546 aa11.13□□□□□ -0.63
TNFAIP3-206ENST00000612899 ZFP62Q8NB50 900 aaPredicted RBP11.13□□□□□ -0.63
TNFAIP3-206ENST00000612899 CPEB3Q8NE35 698 aaKnown RBP11.13□□□□□ -0.63
TNFAIP3-206ENST00000612899 OR10X1Q8NGY0 326 aa11.13□□□□□ -0.63
TNFAIP3-206ENST00000612899 LHX4Q969G2 390 aa11.13□□□□□ -0.63
TNFAIP3-206ENST00000612899 FAAP24Q9BTP7 215 aa11.13□□□□□ -0.63
TNFAIP3-206ENST00000612899 KCNK15Q9H427 330 aa11.13□□□□□ -0.63
TNFAIP3-206ENST00000612899 CNTD2Q9H8S5 307 aa11.13□□□□□ -0.63
TNFAIP3-206ENST00000612899 CES1P1Q9UKY3 287 aa11.13□□□□□ -0.63
TNFAIP3-206ENST00000612899 M0QZK8 103 aa11.12□□□□□ -0.63
TNFAIP3-206ENST00000612899 GGCTO75223 188 aaKnown RBP11.12□□□□□ -0.63
TNFAIP3-206ENST00000612899 CST7O76096 145 aa11.12□□□□□ -0.63
TNFAIP3-206ENST00000612899 ZIC2O95409 532 aaPredicted RBP11.12□□□□□ -0.63
TNFAIP3-206ENST00000612899 TMEM11P17152 192 aa11.12□□□□□ -0.63
TNFAIP3-206ENST00000612899 THBS3P49746 956 aa11.12□□□□□ -0.63
TNFAIP3-206ENST00000612899 ZNF273Q14593 569 aa11.12□□□□□ -0.63
TNFAIP3-206ENST00000612899 CDC20BQ86Y33 519 aa11.12□□□□□ -0.63
TNFAIP3-206ENST00000612899 OR10AC1Q8NH08 325 aa11.12□□□□□ -0.63
TNFAIP3-206ENST00000612899 MED9Q9NWA0 146 aa11.12□□□□□ -0.63
TNFAIP3-206ENST00000612899 A0A1B0GTQ1 180 aa11.12□□□□□ -0.63
TNFAIP3-206ENST00000612899 M0R143 59 aa11.12□□□□□ -0.63
TNFAIP3-206ENST00000612899 PHOX2AO14813 284 aa11.12□□□□□ -0.63
TNFAIP3-206ENST00000612899 MT-ND4LP03901 98 aa11.12□□□□□ -0.63
TNFAIP3-206ENST00000612899 CA6P23280 308 aa11.12□□□□□ -0.63
TNFAIP3-206ENST00000612899 FABP9Q0Z7S8 132 aa11.12□□□□□ -0.63
TNFAIP3-206ENST00000612899 SMIM21Q3B7S5 101 aa11.12□□□□□ -0.63
TNFAIP3-206ENST00000612899 SLC17A5Q9NRA2 495 aa11.12□□□□□ -0.63
TNFAIP3-206ENST00000612899 SHANK3Q9BYB0 1731 aa11.12□□□□□ -0.63
TNFAIP3-206ENST00000612899 CASP8AP2Q9UKL3 1982 aa11.12□□□□□ -0.63
TNFAIP3-206ENST00000612899 F6UZH7 168 aa11.12□□□□□ -0.63
TNFAIP3-206ENST00000612899 SPRY3O43610 288 aa11.12□□□□□ -0.63
TNFAIP3-206ENST00000612899 NPBWR1P48145 328 aa11.12□□□□□ -0.63
TNFAIP3-206ENST00000612899 GSK3AP49840 483 aa11.12□□□□□ -0.63
TNFAIP3-206ENST00000612899 IFITM2Q01629 132 aa11.12□□□□□ -0.63
TNFAIP3-206ENST00000612899 DHRS2Q13268 280 aa11.12□□□□□ -0.63
TNFAIP3-206ENST00000612899 WDR74Q6RFH5 385 aaPredicted RBP11.12□□□□□ -0.63
TNFAIP3-206ENST00000612899 PIKFYVEQ9Y2I7 2098 aa11.12□□□□□ -0.63
TNFAIP3-206ENST00000612899 QSER1Q2KHR3 1735 aa11.12□□□□□ -0.63
TNFAIP3-206ENST00000612899 OR3A4PP47883 348 aa11.11□□□□□ -0.63
TNFAIP3-206ENST00000612899 HES3Q5TGS1 186 aa11.11□□□□□ -0.63
TNFAIP3-206ENST00000612899 TIPARPQ7Z3E1 657 aaKnown RBP11.11□□□□□ -0.63
TNFAIP3-206ENST00000612899 KDF1Q8NAX2 398 aaPredicted RBP11.11□□□□□ -0.63
TNFAIP3-206ENST00000612899 UBAC2Q8NBM4 344 aa11.11□□□□□ -0.63
TNFAIP3-206ENST00000612899 RFESDQ8TAC1 157 aa11.11□□□□□ -0.63
TNFAIP3-206ENST00000612899 ABCD4O14678 606 aa11.11□□□□□ -0.63
TNFAIP3-206ENST00000612899 CD37P11049 281 aa11.11□□□□□ -0.63
TNFAIP3-206ENST00000612899 RAC3P60763 192 aa11.11□□□□□ -0.63
TNFAIP3-206ENST00000612899 MUC20Q8N307 709 aaPredicted RBP11.11□□□□□ -0.63
TNFAIP3-206ENST00000612899 GVQW1Q8N7I0 195 aa11.11□□□□□ -0.63
TNFAIP3-206ENST00000612899 EDARADDQ8WWZ3 215 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms