RNA–Protein interactions for RNA: ENST00000612558.4

CCDC47-207, Transcript of coiled-coil domain containing 47, humanhuman

TSL 5 BASIC

Gene CCDC47, Length 1,586 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-207ENST00000612558 VKORC1Q9BQB6 163 aa7.65□□□□□ -1.18
CCDC47-207ENST00000612558 BCL2L14Q9BZR8 327 aa7.65□□□□□ -1.18
CCDC47-207ENST00000612558 OR2J1Q9GZK6 312 aa7.65□□□□□ -1.18
CCDC47-207ENST00000612558 BANF2Q9H503 90 aa7.65□□□□□ -1.18
CCDC47-207ENST00000612558 ELL3Q9HB65 397 aaPredicted RBP7.65□□□□□ -1.18
CCDC47-207ENST00000612558 PCDHB16Q9NRJ7 776 aa7.65□□□□□ -1.18
CCDC47-207ENST00000612558 SH3BGRL2Q9UJC5 107 aa7.65□□□□□ -1.18
CCDC47-207ENST00000612558 ATRXP46100 2492 aa7.65□□□□□ -1.19
CCDC47-207ENST00000612558 A0A1W2PP11 408 aa7.64□□□□□ -1.19
CCDC47-207ENST00000612558 MED19A0JLT2 244 aaPredicted RBP7.64□□□□□ -1.19
CCDC47-207ENST00000612558 PQLC2LA1A4F0 135 aa7.64□□□□□ -1.19
CCDC47-207ENST00000612558 NAP1L6A6NFF2 107 aa7.64□□□□□ -1.19
CCDC47-207ENST00000612558 CSTBP04080 98 aaKnown RBP7.64□□□□□ -1.19
CCDC47-207ENST00000612558 LPLP06858 475 aa7.64□□□□□ -1.19
CCDC47-207ENST00000612558 MELTFP08582 738 aa7.64□□□□□ -1.19
CCDC47-207ENST00000612558 CSF1P09603 554 aa7.64□□□□□ -1.19
CCDC47-207ENST00000612558 MGMTP16455 207 aa7.64□□□□□ -1.19
CCDC47-207ENST00000612558 SERPINA2P20848 420 aa7.64□□□□□ -1.19
CCDC47-207ENST00000612558 FAM27E3Q08E93 113 aa7.64□□□□□ -1.19
CCDC47-207ENST00000612558 PDZK1IP1Q13113 114 aa7.64□□□□□ -1.19
CCDC47-207ENST00000612558 RSU1Q15404 277 aa7.64□□□□□ -1.19
CCDC47-207ENST00000612558 CDNFQ49AH0 187 aa7.64□□□□□ -1.19
CCDC47-207ENST00000612558 SPATA46Q5T0L3 261 aa7.64□□□□□ -1.19
CCDC47-207ENST00000612558 OR2T2Q6IF00 324 aa7.64□□□□□ -1.19
CCDC47-207ENST00000612558 CELF2-AS1Q8N7Q2 184 aa7.64□□□□□ -1.19
CCDC47-207ENST00000612558 ZSCAN4Q8NAM6 433 aaPredicted RBP7.64□□□□□ -1.19
CCDC47-207ENST00000612558 CHST4Q8NCG5 386 aa7.64□□□□□ -1.19
CCDC47-207ENST00000612558 OR51T1Q8NGJ9 327 aa7.64□□□□□ -1.19
CCDC47-207ENST00000612558 SLC25A40Q8TBP6 338 aa7.64□□□□□ -1.19
CCDC47-207ENST00000612558 GPX8Q8TED1 209 aa7.64□□□□□ -1.19
CCDC47-207ENST00000612558 RND1Q92730 232 aa7.64□□□□□ -1.19
CCDC47-207ENST00000612558 SEH1LQ96EE3 360 aa7.64□□□□□ -1.19
CCDC47-207ENST00000612558 CCDC120Q96HB5 630 aa7.64□□□□□ -1.19
CCDC47-207ENST00000612558 MEGF10Q96KG7 1140 aa7.64□□□□□ -1.19
CCDC47-207ENST00000612558 DMRTA2Q96SC8 542 aa7.64□□□□□ -1.19
CCDC47-207ENST00000612558 NICN1Q9BSH3 213 aa7.64□□□□□ -1.19
CCDC47-207ENST00000612558 TM2D1Q9BX74 207 aa7.64□□□□□ -1.19
CCDC47-207ENST00000612558 SELENOIQ9C0D9 397 aa7.64□□□□□ -1.19
CCDC47-207ENST00000612558 MMP28Q9H239 520 aa7.64□□□□□ -1.19
CCDC47-207ENST00000612558 IL36GQ9NZH8 169 aa7.64□□□□□ -1.19
CCDC47-207ENST00000612558 MRPL15Q9P015 296 aaKnown RBP7.64□□□□□ -1.19
CCDC47-207ENST00000612558 JKAMPQ9P055 326 aa7.64□□□□□ -1.19
CCDC47-207ENST00000612558 NLKQ9UBE8 527 aa7.64□□□□□ -1.19
CCDC47-207ENST00000612558 CADP27708 2225 aa7.64□□□□□ -1.19
CCDC47-207ENST00000612558 SHANK1Q9Y566 2161 aa7.64□□□□□ -1.19
CCDC47-207ENST00000612558 A0A0A6YYD4 124 aa7.63□□□□□ -1.19
CCDC47-207ENST00000612558 IGHV2OR16-5A0A0B4J2B6 119 aa7.63□□□□□ -1.19
CCDC47-207ENST00000612558 TRGV8A0A0C4DH27 118 aa7.63□□□□□ -1.19
CCDC47-207ENST00000612558 WIPF3A6NGB9 483 aa7.63□□□□□ -1.19
CCDC47-207ENST00000612558 OR5B21A6NL26 309 aa7.63□□□□□ -1.19
CCDC47-207ENST00000612558 IQCF6A8MYZ5 107 aa7.63□□□□□ -1.19
CCDC47-207ENST00000612558 C16orf97H3BN30 126 aa7.63□□□□□ -1.19
CCDC47-207ENST00000612558 SOCS1O15524 211 aa7.63□□□□□ -1.19
CCDC47-207ENST00000612558 SPRY1O43609 319 aaPredicted RBP7.63□□□□□ -1.19
CCDC47-207ENST00000612558 ANGPTL7O43827 346 aa7.63□□□□□ -1.19
CCDC47-207ENST00000612558 HTR3BO95264 441 aa7.63□□□□□ -1.19
CCDC47-207ENST00000612558 GSTP1P09211 210 aaKnown RBP7.63□□□□□ -1.19
CCDC47-207ENST00000612558 GTF2F2P13984 249 aa7.63□□□□□ -1.19
CCDC47-207ENST00000612558 CPT2P23786 658 aa7.63□□□□□ -1.19
CCDC47-207ENST00000612558 BTCP35070 178 aa7.63□□□□□ -1.19
CCDC47-207ENST00000612558 ACTBP60709 375 aa7.63□□□□□ -1.19
CCDC47-207ENST00000612558 ACTG1P63261 375 aa7.63□□□□□ -1.19
CCDC47-207ENST00000612558 ARL6IP1Q15041 203 aa7.63□□□□□ -1.19
CCDC47-207ENST00000612558 PPA1Q15181 289 aa7.63□□□□□ -1.19
CCDC47-207ENST00000612558 PCGF3Q3KNV8 242 aa7.63□□□□□ -1.19
CCDC47-207ENST00000612558 PLA1AQ53H76 456 aa7.63□□□□□ -1.19
CCDC47-207ENST00000612558 Q6ZTK2 550 aa7.63□□□□□ -1.19
CCDC47-207ENST00000612558 LIX1LQ8IVB5 337 aa7.63□□□□□ -1.19
CCDC47-207ENST00000612558 CADM3Q8N126 398 aa7.63□□□□□ -1.19
CCDC47-207ENST00000612558 BHLHE23Q8NDY6 225 aa7.63□□□□□ -1.19
CCDC47-207ENST00000612558 OR10K1Q8NGX5 313 aa7.63□□□□□ -1.19
CCDC47-207ENST00000612558 KLF14Q8TD94 323 aaPredicted RBP7.63□□□□□ -1.19
CCDC47-207ENST00000612558 HPSE2Q8WWQ2 592 aa7.63□□□□□ -1.19
CCDC47-207ENST00000612558 OR5P3Q8WZ94 311 aa7.63□□□□□ -1.19
CCDC47-207ENST00000612558 RAB3CQ96E17 227 aa7.63□□□□□ -1.19
CCDC47-207ENST00000612558 MRPS24Q96EL2 167 aaKnown RBP7.63□□□□□ -1.19
CCDC47-207ENST00000612558 MARS2Q96GW9 593 aaKnown RBP7.63□□□□□ -1.19
CCDC47-207ENST00000612558 RNF170Q96K19 258 aa7.63□□□□□ -1.19
CCDC47-207ENST00000612558 ACTR6Q9GZN1 396 aa7.63□□□□□ -1.19
CCDC47-207ENST00000612558 MRPL18Q9H0U6 180 aaKnown RBP7.63□□□□□ -1.19
CCDC47-207ENST00000612558 DPAGT1Q9H3H5 408 aa7.63□□□□□ -1.19
CCDC47-207ENST00000612558 ZMAT3Q9HA38 289 aaKnown RBP7.63□□□□□ -1.19
CCDC47-207ENST00000612558 HRASLSQ9HDD0 168 aa7.63□□□□□ -1.19
CCDC47-207ENST00000612558 CRIM1Q9NZV1 1036 aa7.63□□□□□ -1.19
CCDC47-207ENST00000612558 COPZ2Q9P299 210 aa7.63□□□□□ -1.19
CCDC47-207ENST00000612558 MEMO1Q9Y316 297 aa7.63□□□□□ -1.19
CCDC47-207ENST00000612558 NOP16Q9Y3C1 178 aaKnown RBP7.63□□□□□ -1.19
CCDC47-207ENST00000612558 IGKV1-12A0A0C4DH73 117 aa7.63□□□□□ -1.19
CCDC47-207ENST00000612558 TMEM235A6NFC5 223 aa7.63□□□□□ -1.19
CCDC47-207ENST00000612558 ZNF732B4DXR9 585 aa7.63□□□□□ -1.19
CCDC47-207ENST00000612558 AKR7A2O43488 359 aa7.63□□□□□ -1.19
CCDC47-207ENST00000612558 PLATP00750 562 aa7.63□□□□□ -1.19
CCDC47-207ENST00000612558 IGKV1D-12P01611 117 aa7.63□□□□□ -1.19
CCDC47-207ENST00000612558 MT-ND4P03905 459 aa7.63□□□□□ -1.19
CCDC47-207ENST00000612558 HIST1H1DP16402 221 aaKnown RBP7.63□□□□□ -1.19
CCDC47-207ENST00000612558 GNB3P16520 340 aa7.63□□□□□ -1.19
CCDC47-207ENST00000612558 CA6P23280 308 aa7.63□□□□□ -1.19
CCDC47-207ENST00000612558 GIFP27352 417 aa7.63□□□□□ -1.19
CCDC47-207ENST00000612558 CALCRP30988 508 aa7.63□□□□□ -1.19
CCDC47-207ENST00000612558 FAUP35544 74 aaKnown RBP7.63□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 64 ms