RNA–Protein interactions for RNA: ENST00000611848.1

SMAD4-217, Transcript of SMAD family member 4, humanhuman

TSL 5

Gene SMAD4, Length 1,648 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-217ENST00000611848 C11orf71Q6IPW1 123 aa7.57□□□□□ -1.2
SMAD4-217ENST00000611848 VHLLQ6RSH7 139 aa7.57□□□□□ -1.2
SMAD4-217ENST00000611848 LYPD6Q86Y78 171 aa7.57□□□□□ -1.2
SMAD4-217ENST00000611848 LINC00346Q8IVM7 164 aa7.57□□□□□ -1.2
SMAD4-217ENST00000611848 PAQR4Q8N4S7 273 aaPredicted RBP7.57□□□□□ -1.2
SMAD4-217ENST00000611848 OR51D1Q8NGF3 324 aa7.57□□□□□ -1.2
SMAD4-217ENST00000611848 OR10S1Q8NGN2 331 aa7.57□□□□□ -1.2
SMAD4-217ENST00000611848 OR1F12Q8NHA8 337 aa7.57□□□□□ -1.2
SMAD4-217ENST00000611848 CAPSLQ8WWF8 208 aa7.57□□□□□ -1.2
SMAD4-217ENST00000611848 DEDD2Q8WXF8 326 aa7.57□□□□□ -1.2
SMAD4-217ENST00000611848 FAM3DQ96BQ1 224 aa7.57□□□□□ -1.2
SMAD4-217ENST00000611848 SLAMF6Q96DU3 332 aa7.57□□□□□ -1.2
SMAD4-217ENST00000611848 CITED4Q96RK1 184 aa7.57□□□□□ -1.2
SMAD4-217ENST00000611848 GSX2Q9BZM3 304 aa7.57□□□□□ -1.2
SMAD4-217ENST00000611848 CXXC4Q9H2H0 198 aa7.57□□□□□ -1.2
SMAD4-217ENST00000611848 ZNF701Q9NV72 531 aaPredicted RBP7.57□□□□□ -1.2
SMAD4-217ENST00000611848 MCUBQ9NWR8 336 aa7.57□□□□□ -1.2
SMAD4-217ENST00000611848 ING3Q9NXR8 418 aa7.57□□□□□ -1.2
SMAD4-217ENST00000611848 GDF2Q9UK05 429 aaPredicted RBP7.57□□□□□ -1.2
SMAD4-217ENST00000611848 GTF2A1LQ9UNN4 478 aa7.57□□□□□ -1.2
SMAD4-217ENST00000611848 TRAV6A0A075B6T7 132 aa7.56□□□□□ -1.2
SMAD4-217ENST00000611848 FAM172BPA6NC97 362 aa7.56□□□□□ -1.2
SMAD4-217ENST00000611848 OR6C6A6NF89 314 aa7.56□□□□□ -1.2
SMAD4-217ENST00000611848 GGT3PA6NGU5 568 aa7.56□□□□□ -1.2
SMAD4-217ENST00000611848 H3BSH0 61 aa7.56□□□□□ -1.2
SMAD4-217ENST00000611848 H2AFB2P0C5Z0 115 aa7.56□□□□□ -1.2
SMAD4-217ENST00000611848 ERP29P30040 261 aaKnown RBP7.56□□□□□ -1.2
SMAD4-217ENST00000611848 POU3F4P49335 361 aa7.56□□□□□ -1.2
SMAD4-217ENST00000611848 GZMKP49863 264 aa7.56□□□□□ -1.2
SMAD4-217ENST00000611848 CCR6P51684 374 aa7.56□□□□□ -1.2
SMAD4-217ENST00000611848 EFNB2P52799 333 aa7.56□□□□□ -1.2
SMAD4-217ENST00000611848 CDK10Q15131 360 aa7.56□□□□□ -1.2
SMAD4-217ENST00000611848 C1orf100Q5SVJ3 147 aa7.56□□□□□ -1.2
SMAD4-217ENST00000611848 GLT8D1Q68CQ7 371 aa7.56□□□□□ -1.2
SMAD4-217ENST00000611848 RGS7BPQ6MZT1 257 aaPredicted RBP7.56□□□□□ -1.2
SMAD4-217ENST00000611848 CORO6Q6QEF8 472 aa7.56□□□□□ -1.2
SMAD4-217ENST00000611848 BIVMQ86UB2 503 aa7.56□□□□□ -1.2
SMAD4-217ENST00000611848 HIST2H2ABQ8IUE6 130 aaPredicted RBP7.56□□□□□ -1.2
SMAD4-217ENST00000611848 ELMOD2Q8IZ81 293 aa7.56□□□□□ -1.2
SMAD4-217ENST00000611848 OR13C3Q8NGS6 347 aa7.56□□□□□ -1.2
SMAD4-217ENST00000611848 OR56B4Q8NH76 319 aa7.56□□□□□ -1.2
SMAD4-217ENST00000611848 GCDHQ92947 438 aaPredicted RBP7.56□□□□□ -1.2
SMAD4-217ENST00000611848 MRPL24Q96A35 216 aaKnown RBP7.56□□□□□ -1.2
SMAD4-217ENST00000611848 BEX2Q9BXY8 128 aa7.56□□□□□ -1.2
SMAD4-217ENST00000611848 PLK3Q9H4B4 646 aa7.56□□□□□ -1.2
SMAD4-217ENST00000611848 CENPMQ9NSP4 180 aa7.56□□□□□ -1.2
SMAD4-217ENST00000611848 TAS2R4Q9NYW5 299 aa7.56□□□□□ -1.2
SMAD4-217ENST00000611848 KLK11Q9UBX7 282 aa7.56□□□□□ -1.2
SMAD4-217ENST00000611848 CHD3Q12873 2000 aaKnown RBP7.56□□□□□ -1.2
SMAD4-217ENST00000611848 ITPR3Q14573 2671 aa7.56□□□□□ -1.2
SMAD4-217ENST00000611848 AKAP9Q99996 3911 aa7.56□□□□□ -1.2
SMAD4-217ENST00000611848 TMEM272A0A1B0GTI8 110 aa7.56□□□□□ -1.2
SMAD4-217ENST00000611848 H7C417 338 aa7.56□□□□□ -1.2
SMAD4-217ENST00000611848 J3QW42 95 aa7.56□□□□□ -1.2
SMAD4-217ENST00000611848 LDLRAD4O15165 306 aa7.56□□□□□ -1.2
SMAD4-217ENST00000611848 GMDSO60547 372 aa7.56□□□□□ -1.2
SMAD4-217ENST00000611848 TTRP02766 147 aa7.56□□□□□ -1.2
SMAD4-217ENST00000611848 ACSM4P0C7M7 580 aa7.56□□□□□ -1.2
SMAD4-217ENST00000611848 TUBG1P23258 451 aa7.56□□□□□ -1.2
SMAD4-217ENST00000611848 HTR2CP28335 458 aa7.56□□□□□ -1.2
SMAD4-217ENST00000611848 WNT5AP41221 380 aa7.56□□□□□ -1.2
SMAD4-217ENST00000611848 ATP5J2P56134 94 aa7.56□□□□□ -1.2
SMAD4-217ENST00000611848 SELENOVP59797 346 aa7.56□□□□□ -1.2
SMAD4-217ENST00000611848 SNRPD2P62316 118 aaKnown RBP7.56□□□□□ -1.2
SMAD4-217ENST00000611848 MRPS15P82914 257 aaKnown RBP7.56□□□□□ -1.2
SMAD4-217ENST00000611848 MAB21L1Q13394 359 aa7.56□□□□□ -1.2
SMAD4-217ENST00000611848 TNK1Q13470 666 aa7.56□□□□□ -1.2
SMAD4-217ENST00000611848 MST1LQ2TV78 715 aa7.56□□□□□ -1.2
SMAD4-217ENST00000611848 SHEQ5VZ18 495 aa7.56□□□□□ -1.2
SMAD4-217ENST00000611848 CD276Q5ZPR3 534 aa7.56□□□□□ -1.2
SMAD4-217ENST00000611848 CFAP77Q6ZQR2 320 aa7.56□□□□□ -1.2
SMAD4-217ENST00000611848 NKAIN3Q8N8D7 197 aa7.56□□□□□ -1.2
SMAD4-217ENST00000611848 OR6M1Q8NGM8 313 aa7.56□□□□□ -1.2
SMAD4-217ENST00000611848 FOXRED1Q96CU9 486 aaPredicted RBP7.56□□□□□ -1.2
SMAD4-217ENST00000611848 PBOV1Q9GZY1 135 aa7.56□□□□□ -1.2
SMAD4-217ENST00000611848 MED28Q9H204 178 aa7.56□□□□□ -1.2
SMAD4-217ENST00000611848 OR51J1Q9H342 316 aa7.56□□□□□ -1.2
SMAD4-217ENST00000611848 MOB1AQ9H8S9 216 aa7.56□□□□□ -1.2
SMAD4-217ENST00000611848 DIABLOQ9NR28 239 aa7.56□□□□□ -1.2
SMAD4-217ENST00000611848 TUBG2Q9NRH3 451 aa7.56□□□□□ -1.2
SMAD4-217ENST00000611848 MTFP1Q9UDX5 166 aa7.56□□□□□ -1.2
SMAD4-217ENST00000611848 RHBDD3Q9Y3P4 386 aa7.56□□□□□ -1.2
SMAD4-217ENST00000611848 MAP1AP78559 2803 aaPredicted RBP7.55□□□□□ -1.2
SMAD4-217ENST00000611848 A0A1B0GTI1 187 aa7.55□□□□□ -1.2
SMAD4-217ENST00000611848 ZNF878C9JN71 531 aa7.55□□□□□ -1.2
SMAD4-217ENST00000611848 P2RY10O00398 339 aa7.55□□□□□ -1.2
SMAD4-217ENST00000611848 PRAF2O60831 178 aa7.55□□□□□ -1.2
SMAD4-217ENST00000611848 PTHLHP12272 177 aa7.55□□□□□ -1.2
SMAD4-217ENST00000611848 ZNF250P15622 560 aa7.55□□□□□ -1.2
SMAD4-217ENST00000611848 CDKN1AP38936 164 aa7.55□□□□□ -1.2
SMAD4-217ENST00000611848 MECP2P51608 486 aaKnown RBP7.55□□□□□ -1.2
SMAD4-217ENST00000611848 CAPZA1P52907 286 aa7.55□□□□□ -1.2
SMAD4-217ENST00000611848 PSMA6P60900 246 aaKnown RBP7.55□□□□□ -1.2
SMAD4-217ENST00000611848 SSBP1Q04837 148 aaKnown RBP7.55□□□□□ -1.2
SMAD4-217ENST00000611848 FCN2Q15485 313 aa7.55□□□□□ -1.2
SMAD4-217ENST00000611848 TESK1Q15569 626 aa7.55□□□□□ -1.2
SMAD4-217ENST00000611848 ZNF718Q3SXZ3 478 aa7.55□□□□□ -1.2
SMAD4-217ENST00000611848 TMEM255AQ5JRV8 349 aa7.55□□□□□ -1.2
SMAD4-217ENST00000611848 GLYATL3Q5SZD4 288 aa7.55□□□□□ -1.2
SMAD4-217ENST00000611848 ZNF529Q6P280 563 aa7.55□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms