RNA–Protein interactions for RNA: ENST00000602140.1

RPS28-204, Transcript of ribosomal protein S28, humanhuman

TSL 1 (best)

Gene RPS28, Length 912 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28-204ENST00000602140 ENPP5Q9UJA9 477 aa10.7□□□□□ -0.7
RPS28-204ENST00000602140 IKZF2Q9UKS7 526 aa10.7□□□□□ -0.7
RPS28-204ENST00000602140 COPS3Q9UNS2 423 aa10.7□□□□□ -0.7
RPS28-204ENST00000602140 FOXJ3Q9UPW0 622 aa10.7□□□□□ -0.7
RPS28-204ENST00000602140 TET2Q6N021 2002 aaPredicted RBP10.69□□□□□ -0.7
RPS28-204ENST00000602140 A0A1W2PPH5 198 aa10.69□□□□□ -0.7
RPS28-204ENST00000602140 CCDC182A6NF36 153 aa10.69□□□□□ -0.7
RPS28-204ENST00000602140 SLC1A7O00341 560 aa10.69□□□□□ -0.7
RPS28-204ENST00000602140 PRDX2P32119 198 aa10.69□□□□□ -0.7
RPS28-204ENST00000602140 HAAOP46952 286 aa10.69□□□□□ -0.7
RPS28-204ENST00000602140 CEBPDP49716 269 aaPredicted RBP10.69□□□□□ -0.7
RPS28-204ENST00000602140 BMXP51813 675 aa10.69□□□□□ -0.7
RPS28-204ENST00000602140 RIDAP52758 137 aaKnown RBP10.69□□□□□ -0.7
RPS28-204ENST00000602140 ERVFRD-1P60508 538 aa10.69□□□□□ -0.7
RPS28-204ENST00000602140 MFGE8Q08431 387 aaPredicted RBP10.69□□□□□ -0.7
RPS28-204ENST00000602140 AANATQ16613 207 aa10.69□□□□□ -0.7
RPS28-204ENST00000602140 ZNF829Q3KNS6 432 aaPredicted RBP10.69□□□□□ -0.7
RPS28-204ENST00000602140 ZNF684Q5T5D7 378 aa10.69□□□□□ -0.7
RPS28-204ENST00000602140 LCN1P1Q5VSP4 162 aa10.69□□□□□ -0.7
RPS28-204ENST00000602140 CRIP3Q6Q6R5 217 aa10.69□□□□□ -0.7
RPS28-204ENST00000602140 ZNF561Q8N587 486 aa10.69□□□□□ -0.7
RPS28-204ENST00000602140 C11orf42Q8N5U0 333 aa10.69□□□□□ -0.7
RPS28-204ENST00000602140 CCDC197Q8NCU1 140 aa10.69□□□□□ -0.7
RPS28-204ENST00000602140 OR4M1Q8NGD0 313 aa10.69□□□□□ -0.7
RPS28-204ENST00000602140 OR2T27Q8NH04 317 aa10.69□□□□□ -0.7
RPS28-204ENST00000602140 OR2T6Q8NHC8 308 aa10.69□□□□□ -0.7
RPS28-204ENST00000602140 ASB17Q8WXJ9 295 aa10.69□□□□□ -0.7
RPS28-204ENST00000602140 C1orf21Q9H246 121 aa10.69□□□□□ -0.7
RPS28-204ENST00000602140 RAB18Q9NP72 206 aa10.69□□□□□ -0.7
RPS28-204ENST00000602140 NUFIP1Q9UHK0 495 aaKnown RBP10.69□□□□□ -0.7
RPS28-204ENST00000602140 GTF2A1LQ9UNN4 478 aa10.69□□□□□ -0.7
RPS28-204ENST00000602140 TMEM14AQ9Y6G1 99 aa10.69□□□□□ -0.7
RPS28-204ENST00000602140 hCG_1809904A0A1W2PP81 198 aa10.68□□□□□ -0.7
RPS28-204ENST00000602140 A0A1W2PPE2 198 aa10.68□□□□□ -0.7
RPS28-204ENST00000602140 A0A1W2PR64 198 aa10.68□□□□□ -0.7
RPS28-204ENST00000602140 A0A1W2PRV1 198 aa10.68□□□□□ -0.7
RPS28-204ENST00000602140 G3V4G9 280 aa10.68□□□□□ -0.7
RPS28-204ENST00000602140 J3QT63 122 aa10.68□□□□□ -0.7
RPS28-204ENST00000602140 DHRS3O75911 302 aa10.68□□□□□ -0.7
RPS28-204ENST00000602140 NXPH2O95156 264 aa10.68□□□□□ -0.7
RPS28-204ENST00000602140 TTRP02766 147 aa10.68□□□□□ -0.7
RPS28-204ENST00000602140 PGA5P0DJD9 388 aa10.68□□□□□ -0.7
RPS28-204ENST00000602140 CCL3L1P16619 93 aa10.68□□□□□ -0.7
RPS28-204ENST00000602140 HOXB6P17509 224 aaKnown RBP10.68□□□□□ -0.7
RPS28-204ENST00000602140 COX7A1P24310 79 aa10.68□□□□□ -0.7
RPS28-204ENST00000602140 CRISP1P54107 249 aa10.68□□□□□ -0.7
RPS28-204ENST00000602140 LGALS4P56470 323 aa10.68□□□□□ -0.7
RPS28-204ENST00000602140 ESRRGP62508 458 aa10.68□□□□□ -0.7
RPS28-204ENST00000602140 CBX1P83916 185 aa10.68□□□□□ -0.7
RPS28-204ENST00000602140 C11orf88Q6PI97 169 aa10.68□□□□□ -0.7
RPS28-204ENST00000602140 SPATA24Q86W54 205 aa10.68□□□□□ -0.7
RPS28-204ENST00000602140 ZNF573Q86YE8 665 aa10.68□□□□□ -0.7
RPS28-204ENST00000602140 BATF2Q8N1L9 274 aa10.68□□□□□ -0.7
RPS28-204ENST00000602140 KLHDC1Q8N7A1 406 aa10.68□□□□□ -0.7
RPS28-204ENST00000602140 PIFOQ8TCI5 191 aa10.68□□□□□ -0.7
RPS28-204ENST00000602140 RANBP3Q9H6Z4 567 aaPredicted RBP10.68□□□□□ -0.7
RPS28-204ENST00000602140 GPR173Q9NS66 373 aa10.68□□□□□ -0.7
RPS28-204ENST00000602140 USE1Q9NZ43 259 aa10.68□□□□□ -0.7
RPS28-204ENST00000602140 DNAJB9Q9UBS3 223 aa10.68□□□□□ -0.7
RPS28-204ENST00000602140 A6NIN4 97 aa10.67□□□□□ -0.7
RPS28-204ENST00000602140 LOC110117498-PIK3R3F6TDL0 507 aa10.67□□□□□ -0.7
RPS28-204ENST00000602140 MAGEB4O15481 346 aaPredicted RBP10.67□□□□□ -0.7
RPS28-204ENST00000602140 CHST1O43916 411 aa10.67□□□□□ -0.7
RPS28-204ENST00000602140 PRKYO43930 277 aa10.67□□□□□ -0.7
RPS28-204ENST00000602140 NOS1APO75052 506 aaPredicted RBP10.67□□□□□ -0.7
RPS28-204ENST00000602140 FKBP6O75344 327 aa10.67□□□□□ -0.7
RPS28-204ENST00000602140 SRSF10O75494 262 aaKnown RBP10.67□□□□□ -0.7
RPS28-204ENST00000602140 OPN1MWP04001 364 aa10.67□□□□□ -0.7
RPS28-204ENST00000602140 OPN1MW2P0DN77 364 aa10.67□□□□□ -0.7
RPS28-204ENST00000602140 OPN1MW3P0DN78 364 aa10.67□□□□□ -0.7
RPS28-204ENST00000602140 VSIG10L2P0DP72 767 aa10.67□□□□□ -0.7
RPS28-204ENST00000602140 ZNF273Q14593 569 aa10.67□□□□□ -0.7
RPS28-204ENST00000602140 CLVS2Q5SYC1 327 aa10.67□□□□□ -0.7
RPS28-204ENST00000602140 TMEM42Q69YG0 159 aa10.67□□□□□ -0.7
RPS28-204ENST00000602140 ZNF782Q6ZMW2 699 aaPredicted RBP10.67□□□□□ -0.7
RPS28-204ENST00000602140 ASRGL1Q7L266 308 aa10.67□□□□□ -0.7
RPS28-204ENST00000602140 BCDIN3DQ7Z5W3 292 aaKnown RBP10.67□□□□□ -0.7
RPS28-204ENST00000602140 CFHR4Q92496 578 aa10.67□□□□□ -0.7
RPS28-204ENST00000602140 CNN2Q99439 309 aaKnown RBP10.67□□□□□ -0.7
RPS28-204ENST00000602140 NKX3-1Q99801 234 aaPredicted RBP10.67□□□□□ -0.7
RPS28-204ENST00000602140 APOL4Q9BPW4 351 aa10.67□□□□□ -0.7
RPS28-204ENST00000602140 NRIP2Q9BQI9 281 aa10.67□□□□□ -0.7
RPS28-204ENST00000602140 NPFFR1Q9GZQ6 430 aa10.67□□□□□ -0.7
RPS28-204ENST00000602140 PAPOLBQ9NRJ5 636 aaKnown RBP10.67□□□□□ -0.7
RPS28-204ENST00000602140 OR14J1Q9UGF5 321 aa10.67□□□□□ -0.7
RPS28-204ENST00000602140 POLDIP2Q9Y2S7 368 aa10.67□□□□□ -0.7
RPS28-204ENST00000602140 PQLC2LA1A4F0 135 aa10.66□□□□□ -0.7
RPS28-204ENST00000602140 MEGF11A6BM72 1044 aa10.66□□□□□ -0.7
RPS28-204ENST00000602140 DLGAP1O14490 977 aa10.66□□□□□ -0.7
RPS28-204ENST00000602140 FAM107AO95990 144 aa10.66□□□□□ -0.7
RPS28-204ENST00000602140 TK1P04183 234 aa10.66□□□□□ -0.7
RPS28-204ENST00000602140 PIPP12273 146 aaPredicted RBP10.66□□□□□ -0.7
RPS28-204ENST00000602140 DAPP51397 102 aa10.66□□□□□ -0.7
RPS28-204ENST00000602140 CXCR4P61073 352 aa10.66□□□□□ -0.7
RPS28-204ENST00000602140 FLOT2Q14254 428 aa10.66□□□□□ -0.7
RPS28-204ENST00000602140 PTGES3Q15185 160 aaKnown RBP10.66□□□□□ -0.7
RPS28-204ENST00000602140 BEAN1Q3B7T3 259 aa10.66□□□□□ -0.7
RPS28-204ENST00000602140 PLA1AQ53H76 456 aa10.66□□□□□ -0.7
RPS28-204ENST00000602140 BCL2L15Q5TBC7 163 aa10.66□□□□□ -0.7
RPS28-204ENST00000602140 ZNF322Q6U7Q0 402 aaPredicted RBP10.66□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms