RNA–Protein interactions for RNA: ENST00000601689.1

UPF1-212, Transcript of UPF1, RNA helicase and ATPase, humanhuman

TSL 4

Gene UPF1, Length 561 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF1-212ENST00000601689 IL13RA1P78552 427 aa16.11■□□□□ 0.17
UPF1-212ENST00000601689 PAX8Q06710 450 aa16.11■□□□□ 0.17
UPF1-212ENST00000601689 ATPAF1Q5TC12 328 aaPredicted RBP16.11■□□□□ 0.17
UPF1-212ENST00000601689 RPL22L1Q6P5R6 122 aaKnown RBP16.11■□□□□ 0.17
UPF1-212ENST00000601689 FIP1L1Q6UN15 594 aaKnown RBP16.11■□□□□ 0.17
UPF1-212ENST00000601689 ZNF841Q6ZN19 808 aa16.11■□□□□ 0.17
UPF1-212ENST00000601689 UTS2BQ765I0 119 aa16.11■□□□□ 0.17
UPF1-212ENST00000601689 BPIFB2Q8N4F0 458 aa16.11■□□□□ 0.17
UPF1-212ENST00000601689 POC1AQ8NBT0 407 aa16.11■□□□□ 0.17
UPF1-212ENST00000601689 DNAAF1Q8NEP3 725 aa16.11■□□□□ 0.17
UPF1-212ENST00000601689 OR5T2Q8NGG2 359 aa16.11■□□□□ 0.17
UPF1-212ENST00000601689 TSEN15Q8WW01 171 aaKnown RBP16.11■□□□□ 0.17
UPF1-212ENST00000601689 TMEM158Q8WZ71 300 aa16.11■□□□□ 0.17
UPF1-212ENST00000601689 TFAP2CQ92754 450 aa16.11■□□□□ 0.17
UPF1-212ENST00000601689 SPSB1Q96BD6 273 aa16.11■□□□□ 0.17
UPF1-212ENST00000601689 JMJD8Q96S16 334 aa16.11■□□□□ 0.17
UPF1-212ENST00000601689 SCN3BQ9NY72 215 aa16.11■□□□□ 0.17
UPF1-212ENST00000601689 NKX1-2Q9UD57 310 aaPredicted RBP16.11■□□□□ 0.17
UPF1-212ENST00000601689 DHDHQ9UQ10 334 aa16.11■□□□□ 0.17
UPF1-212ENST00000601689 A0A0A6YYJ9 748 aa16.1■□□□□ 0.17
UPF1-212ENST00000601689 OR4C45A6NMZ5 311 aa16.1■□□□□ 0.17
UPF1-212ENST00000601689 TNFRSF13BO14836 293 aaPredicted RBP16.1■□□□□ 0.17
UPF1-212ENST00000601689 MAGEB3O15480 346 aa16.1■□□□□ 0.17
UPF1-212ENST00000601689 CD2P06729 351 aa16.1■□□□□ 0.17
UPF1-212ENST00000601689 PIPP12273 146 aaPredicted RBP16.1■□□□□ 0.17
UPF1-212ENST00000601689 HSPA13P48723 471 aa16.1■□□□□ 0.17
UPF1-212ENST00000601689 IL24Q13007 206 aa16.1■□□□□ 0.17
UPF1-212ENST00000601689 UBE2V2Q15819 145 aa16.1■□□□□ 0.17
UPF1-212ENST00000601689 STUMQ69YW2 141 aa16.1■□□□□ 0.17
UPF1-212ENST00000601689 RBMS3Q6XE24 437 aaKnown RBP16.1■□□□□ 0.17
UPF1-212ENST00000601689 LHFPL2Q6ZUX7 228 aa16.1■□□□□ 0.17
UPF1-212ENST00000601689 SERPINA12Q8IW75 414 aa16.1■□□□□ 0.17
UPF1-212ENST00000601689 MKXQ8IYA7 352 aa16.1■□□□□ 0.17
UPF1-212ENST00000601689 BPIFB6Q8NFQ5 453 aa16.1■□□□□ 0.17
UPF1-212ENST00000601689 OR5D14Q8NGL3 314 aa16.1■□□□□ 0.17
UPF1-212ENST00000601689 NPRL2Q8WTW4 380 aa16.1■□□□□ 0.17
UPF1-212ENST00000601689 CPNE2Q96FN4 548 aaPredicted RBP16.1■□□□□ 0.17
UPF1-212ENST00000601689 FGF23Q9GZV9 251 aaPredicted RBP16.1■□□□□ 0.17
UPF1-212ENST00000601689 WDR13Q9H1Z4 485 aa16.1■□□□□ 0.17
UPF1-212ENST00000601689 CTSZQ9UBR2 303 aa16.1■□□□□ 0.17
UPF1-212ENST00000601689 SVEP1Q4LDE5 3571 aa16.1■□□□□ 0.17
UPF1-212ENST00000601689 SLC1A7O00341 560 aa16.09■□□□□ 0.17
UPF1-212ENST00000601689 MYL12BO14950 172 aa16.09■□□□□ 0.17
UPF1-212ENST00000601689 NOS1APO75052 506 aaPredicted RBP16.09■□□□□ 0.17
UPF1-212ENST00000601689 AVPP01185 164 aa16.09■□□□□ 0.17
UPF1-212ENST00000601689 ACAA1P09110 424 aaPredicted RBP16.09■□□□□ 0.17
UPF1-212ENST00000601689 LIMS3P0CW19 117 aa16.09■□□□□ 0.17
UPF1-212ENST00000601689 LIMS4P0CW20 117 aa16.09■□□□□ 0.17
UPF1-212ENST00000601689 ADRA2CP18825 462 aa16.09■□□□□ 0.17
UPF1-212ENST00000601689 ATF1P18846 271 aa16.09■□□□□ 0.17
UPF1-212ENST00000601689 MTCP1P56278 107 aa16.09■□□□□ 0.17
UPF1-212ENST00000601689 HOXA4Q00056 320 aaPredicted RBP16.09■□□□□ 0.17
UPF1-212ENST00000601689 ST3GAL4Q11206 333 aa16.09■□□□□ 0.17
UPF1-212ENST00000601689 IKZF1Q13422 519 aa16.09■□□□□ 0.17
UPF1-212ENST00000601689 METTL11BQ5VVY1 283 aa16.09■□□□□ 0.17
UPF1-212ENST00000601689 BTN2A1Q7KYR7 527 aa16.09■□□□□ 0.17
UPF1-212ENST00000601689 Q8IYB0 196 aa16.09■□□□□ 0.17
UPF1-212ENST00000601689 CMTM4Q8IZR5 234 aa16.09■□□□□ 0.17
UPF1-212ENST00000601689 OR52N1Q8NH53 320 aa16.09■□□□□ 0.17
UPF1-212ENST00000601689 DMRTB1Q96MA1 342 aa16.09■□□□□ 0.17
UPF1-212ENST00000601689 SUCNR1Q9BXA5 334 aa16.09■□□□□ 0.17
UPF1-212ENST00000601689 RASSF4Q9H2L5 321 aa16.09■□□□□ 0.17
UPF1-212ENST00000601689 PLCXD1Q9NUJ7 323 aa16.09■□□□□ 0.17
UPF1-212ENST00000601689 BABAM2Q9NXR7 383 aa16.09■□□□□ 0.17
UPF1-212ENST00000601689 NUP50Q9UKX7 468 aa16.09■□□□□ 0.17
UPF1-212ENST00000601689 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP16.08■□□□□ 0.16
UPF1-212ENST00000601689 GNAO1P09471 354 aa16.08■□□□□ 0.16
UPF1-212ENST00000601689 PGA5P0DJD9 388 aa16.08■□□□□ 0.16
UPF1-212ENST00000601689 MPZP25189 248 aa16.08■□□□□ 0.16
UPF1-212ENST00000601689 ETV1P50549 477 aa16.08■□□□□ 0.16
UPF1-212ENST00000601689 CAPZA1P52907 286 aa16.08■□□□□ 0.16
UPF1-212ENST00000601689 TAS2R43P59537 309 aa16.08■□□□□ 0.16
UPF1-212ENST00000601689 ACP7Q6ZNF0 438 aa16.08■□□□□ 0.16
UPF1-212ENST00000601689 ZNF788Q6ZQV5 615 aa16.08■□□□□ 0.16
UPF1-212ENST00000601689 ANGPTL5Q86XS5 388 aa16.08■□□□□ 0.16
UPF1-212ENST00000601689 ANGPTL6Q8NI99 470 aa16.08■□□□□ 0.16
UPF1-212ENST00000601689 GPR148Q8TDV2 347 aa16.08■□□□□ 0.16
UPF1-212ENST00000601689 H1FXQ92522 213 aaKnown RBP16.08■□□□□ 0.16
UPF1-212ENST00000601689 GGHQ92820 318 aa16.08■□□□□ 0.16
UPF1-212ENST00000601689 ADAT3Q96EY9 351 aaPredicted RBP16.08■□□□□ 0.16
UPF1-212ENST00000601689 OPALINQ96PE5 141 aa16.08■□□□□ 0.16
UPF1-212ENST00000601689 ZNF649Q9BS31 505 aa16.08■□□□□ 0.16
UPF1-212ENST00000601689 MS4A7Q9GZW8 240 aaPredicted RBP16.08■□□□□ 0.16
UPF1-212ENST00000601689 ZCCHC4Q9H5U6 513 aa16.08■□□□□ 0.16
UPF1-212ENST00000601689 SLC25A10Q9UBX3 287 aaPredicted RBP16.08■□□□□ 0.16
UPF1-212ENST00000601689 OPN4Q9UHM6 478 aa16.08■□□□□ 0.16
UPF1-212ENST00000601689 GLS2Q9UI32 602 aa16.08■□□□□ 0.16
UPF1-212ENST00000601689 ERGIC3Q9Y282 383 aa16.08■□□□□ 0.16
UPF1-212ENST00000601689 SIGLEC5O15389 551 aa16.07■□□□□ 0.16
UPF1-212ENST00000601689 SYNGR1O43759 233 aa16.07■□□□□ 0.16
UPF1-212ENST00000601689 ZFPL1O95159 310 aa16.07■□□□□ 0.16
UPF1-212ENST00000601689 PSG2P11465 335 aa16.07■□□□□ 0.16
UPF1-212ENST00000601689 NDUFB7P17568 137 aa16.07■□□□□ 0.16
UPF1-212ENST00000601689 AZGP1P25311 298 aaKnown RBP16.07■□□□□ 0.16
UPF1-212ENST00000601689 BPIFB3P59826 476 aa16.07■□□□□ 0.16
UPF1-212ENST00000601689 OR2G6Q5TZ20 316 aa16.07■□□□□ 0.16
UPF1-212ENST00000601689 GPR157Q5UAW9 335 aa16.07■□□□□ 0.16
UPF1-212ENST00000601689 C1orf229Q6ZS94 237 aaPredicted RBP16.07■□□□□ 0.16
UPF1-212ENST00000601689 AHSA2Q719I0 299 aa16.07■□□□□ 0.16
UPF1-212ENST00000601689 ZNF561Q8N587 486 aa16.07■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms