RNA–Protein interactions for RNA: ENST00000600274.5

ARHGEF1-220, Transcript of Rho guanine nucleotide exchange factor 1, humanhuman

TSL 1 (best)

Gene ARHGEF1, Length 3,439 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF1-220ENST00000600274 OR1F12Q8NHA8 337 aa10.07□□□□□ -0.8
ARHGEF1-220ENST00000600274 TMED6Q8WW62 240 aa10.07□□□□□ -0.8
ARHGEF1-220ENST00000600274 LDAHQ9H6V9 325 aa10.07□□□□□ -0.8
ARHGEF1-220ENST00000600274 DMXL1Q9Y485 3027 aa10.07□□□□□ -0.8
ARHGEF1-220ENST00000600274 LRRC3CA6NJW4 275 aa10.07□□□□□ -0.8
ARHGEF1-220ENST00000600274 TNFSF15O95150 251 aa10.07□□□□□ -0.8
ARHGEF1-220ENST00000600274 HPNP05981 417 aa10.07□□□□□ -0.8
ARHGEF1-220ENST00000600274 QRFPP83859 136 aa10.07□□□□□ -0.8
ARHGEF1-220ENST00000600274 ZNF660Q6AZW8 331 aaPredicted RBP10.07□□□□□ -0.8
ARHGEF1-220ENST00000600274 SLC16A13Q7RTY0 426 aa10.07□□□□□ -0.8
ARHGEF1-220ENST00000600274 MCEMP1Q8IX19 187 aa10.07□□□□□ -0.8
ARHGEF1-220ENST00000600274 SPAG16Q8N0X2 631 aa10.07□□□□□ -0.8
ARHGEF1-220ENST00000600274 OR5T2Q8NGG2 359 aa10.07□□□□□ -0.8
ARHGEF1-220ENST00000600274 RNF138Q8WVD3 245 aa10.07□□□□□ -0.8
ARHGEF1-220ENST00000600274 CDC6Q99741 560 aa10.07□□□□□ -0.8
ARHGEF1-220ENST00000600274 UTP23Q9BRU9 249 aaKnown RBP10.07□□□□□ -0.8
ARHGEF1-220ENST00000600274 PAPOLGQ9BWT3 736 aaKnown RBP10.07□□□□□ -0.8
ARHGEF1-220ENST00000600274 PIEZO2Q9H5I5 2752 aa10.07□□□□□ -0.8
ARHGEF1-220ENST00000600274 SHANK1Q9Y566 2161 aa10.07□□□□□ -0.8
ARHGEF1-220ENST00000600274 TRAV14DV4A0A0A6YYC5 116 aa10.07□□□□□ -0.8
ARHGEF1-220ENST00000600274 A0A1W2PR80 420 aa10.07□□□□□ -0.8
ARHGEF1-220ENST00000600274 TRIM77I1YAP6 450 aa10.07□□□□□ -0.8
ARHGEF1-220ENST00000600274 FBXO24O75426 580 aa10.07□□□□□ -0.8
ARHGEF1-220ENST00000600274 OR7C1O76099 320 aaPredicted RBP10.07□□□□□ -0.8
ARHGEF1-220ENST00000600274 PSG4Q00888 419 aa10.07□□□□□ -0.8
ARHGEF1-220ENST00000600274 SWI5Q1ZZU3 235 aa10.07□□□□□ -0.8
ARHGEF1-220ENST00000600274 DNM1P46Q6ZS02 220 aa10.07□□□□□ -0.8
ARHGEF1-220ENST00000600274 SKA3Q8IX90 412 aa10.07□□□□□ -0.8
ARHGEF1-220ENST00000600274 TUSC5Q8IXB3 177 aa10.07□□□□□ -0.8
ARHGEF1-220ENST00000600274 OR5M8Q8NGP6 311 aa10.07□□□□□ -0.8
ARHGEF1-220ENST00000600274 OR1S2Q8NGQ3 325 aa10.07□□□□□ -0.8
ARHGEF1-220ENST00000600274 TERB2Q8NHR7 220 aa10.07□□□□□ -0.8
ARHGEF1-220ENST00000600274 MRGPRFQ96AM1 343 aa10.07□□□□□ -0.8
ARHGEF1-220ENST00000600274 SMIM3Q9BZL3 60 aa10.07□□□□□ -0.8
ARHGEF1-220ENST00000600274 FN3KRPQ9HA64 309 aa10.07□□□□□ -0.8
ARHGEF1-220ENST00000600274 ZNF629Q9UEG4 869 aaPredicted RBP10.07□□□□□ -0.8
ARHGEF1-220ENST00000600274 ADAMTS20P59510 1910 aa10.06□□□□□ -0.8
ARHGEF1-220ENST00000600274 SPTA1P02549 2419 aa10.06□□□□□ -0.8
ARHGEF1-220ENST00000600274 A0A0A6YYH2 397 aa10.06□□□□□ -0.8
ARHGEF1-220ENST00000600274 A6NJ64 397 aa10.06□□□□□ -0.8
ARHGEF1-220ENST00000600274 SERPINA7P05543 415 aa10.06□□□□□ -0.8
ARHGEF1-220ENST00000600274 SSPNQ14714 243 aa10.06□□□□□ -0.8
ARHGEF1-220ENST00000600274 OR1C1Q15619 314 aa10.06□□□□□ -0.8
ARHGEF1-220ENST00000600274 IGFBP7Q16270 282 aa10.06□□□□□ -0.8
ARHGEF1-220ENST00000600274 HIST3H3Q16695 136 aa10.06□□□□□ -0.8
ARHGEF1-220ENST00000600274 SP6Q3SY56 376 aa10.06□□□□□ -0.8
ARHGEF1-220ENST00000600274 PABPC1L2AQ5JQF8 200 aa10.06□□□□□ -0.8
ARHGEF1-220ENST00000600274 PDSS1Q5T2R2 415 aa10.06□□□□□ -0.8
ARHGEF1-220ENST00000600274 TMEM200AQ86VY9 491 aa10.06□□□□□ -0.8
ARHGEF1-220ENST00000600274 MGAQ8IWI9 3026 aa10.06□□□□□ -0.8
ARHGEF1-220ENST00000600274 CSAG2Q9Y5P2 127 aa10.06□□□□□ -0.8
ARHGEF1-220ENST00000600274 EXPH5Q8NEV8 1989 aa10.06□□□□□ -0.8
ARHGEF1-220ENST00000600274 IGKV1D-8A0A087WSZ0 117 aa10.06□□□□□ -0.8
ARHGEF1-220ENST00000600274 C5orf49A4QMS7 147 aa10.06□□□□□ -0.8
ARHGEF1-220ENST00000600274 NDUFS6O75380 124 aaKnown RBP10.06□□□□□ -0.8
ARHGEF1-220ENST00000600274 HOXA6P31267 233 aa10.06□□□□□ -0.8
ARHGEF1-220ENST00000600274 RIPPLY1Q0D2K3 151 aa10.06□□□□□ -0.8
ARHGEF1-220ENST00000600274 FAM209BQ5JX69 171 aa10.06□□□□□ -0.8
ARHGEF1-220ENST00000600274 FAM180AQ6UWF9 173 aa10.06□□□□□ -0.8
ARHGEF1-220ENST00000600274 C5orf24Q7Z6I8 188 aa10.06□□□□□ -0.8
ARHGEF1-220ENST00000600274 GGNQ86UU5 652 aa10.06□□□□□ -0.8
ARHGEF1-220ENST00000600274 CCDC36Q8IYA8 594 aa10.06□□□□□ -0.8
ARHGEF1-220ENST00000600274 TAAR9Q96RI9 348 aa10.06□□□□□ -0.8
ARHGEF1-220ENST00000600274 ZNF442Q9H7R0 627 aa10.06□□□□□ -0.8
ARHGEF1-220ENST00000600274 FAM86C1Q9NVL1 165 aa10.06□□□□□ -0.8
ARHGEF1-220ENST00000600274 BOKQ9UMX3 212 aaPredicted RBP10.06□□□□□ -0.8
ARHGEF1-220ENST00000600274 FAM96BQ9Y3D0 163 aa10.06□□□□□ -0.8
ARHGEF1-220ENST00000600274 ARGFXA6NJG6 315 aa10.05□□□□□ -0.8
ARHGEF1-220ENST00000600274 C19orf67A6NJJ6 358 aa10.05□□□□□ -0.8
ARHGEF1-220ENST00000600274 M0R296 226 aa10.05□□□□□ -0.8
ARHGEF1-220ENST00000600274 CD74P04233 296 aa10.05□□□□□ -0.8
ARHGEF1-220ENST00000600274 ARF1P84077 181 aaKnown RBP10.05□□□□□ -0.8
ARHGEF1-220ENST00000600274 ZNF92Q03936 586 aa10.05□□□□□ -0.8
ARHGEF1-220ENST00000600274 SSBP1Q04837 148 aaKnown RBP10.05□□□□□ -0.8
ARHGEF1-220ENST00000600274 CLINT1Q14677 625 aa10.05□□□□□ -0.8
ARHGEF1-220ENST00000600274 SLC25A42Q86VD7 318 aa10.05□□□□□ -0.8
ARHGEF1-220ENST00000600274 LYPD6Q86Y78 171 aa10.05□□□□□ -0.8
ARHGEF1-220ENST00000600274 FBXL14Q8N1E6 418 aa10.05□□□□□ -0.8
ARHGEF1-220ENST00000600274 OR52H1Q8NGJ2 320 aa10.05□□□□□ -0.8
ARHGEF1-220ENST00000600274 TMEM54Q969K7 222 aa10.05□□□□□ -0.8
ARHGEF1-220ENST00000600274 C1orf147Q96MC9 270 aaPredicted RBP10.05□□□□□ -0.8
ARHGEF1-220ENST00000600274 ZNF2Q9BSG1 426 aaPredicted RBP10.05□□□□□ -0.8
ARHGEF1-220ENST00000600274 PECRQ9BY49 303 aa10.05□□□□□ -0.8
ARHGEF1-220ENST00000600274 TMEM38BQ9NVV0 291 aa10.05□□□□□ -0.8
ARHGEF1-220ENST00000600274 MCTS1Q9ULC4 181 aaKnown RBP10.05□□□□□ -0.8
ARHGEF1-220ENST00000600274 CACNA1DQ01668 2161 aa10.05□□□□□ -0.8
ARHGEF1-220ENST00000600274 RFPL4AA6NLU0 287 aa10.05□□□□□ -0.8
ARHGEF1-220ENST00000600274 RFPL4AL1F8VTS6 287 aa10.05□□□□□ -0.8
ARHGEF1-220ENST00000600274 GEMIN2O14893 280 aaKnown RBP10.05□□□□□ -0.8
ARHGEF1-220ENST00000600274 EFSO43281 561 aa10.05□□□□□ -0.8
ARHGEF1-220ENST00000600274 NRASP01111 189 aa10.05□□□□□ -0.8
ARHGEF1-220ENST00000600274 CPT2P23786 658 aa10.05□□□□□ -0.8
ARHGEF1-220ENST00000600274 ZBTB25P24278 435 aa10.05□□□□□ -0.8
ARHGEF1-220ENST00000600274 FKBP2P26885 142 aaKnown RBP10.05□□□□□ -0.8
ARHGEF1-220ENST00000600274 RPS27AP62979 156 aaKnown RBP10.05□□□□□ -0.8
ARHGEF1-220ENST00000600274 FGL1Q08830 312 aa10.05□□□□□ -0.8
ARHGEF1-220ENST00000600274 PHLDA2Q53GA4 152 aa10.05□□□□□ -0.8
ARHGEF1-220ENST00000600274 SPATA46Q5T0L3 261 aa10.05□□□□□ -0.8
ARHGEF1-220ENST00000600274 LINC00469Q8N7U9 141 aa10.05□□□□□ -0.8
ARHGEF1-220ENST00000600274 OR1S1Q8NH92 325 aa10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms