RNA–Protein interactions for RNA: ENST00000598359.5

SCAF1-203, Transcript of SR-related CTD associated factor 1, humanhuman

APPRIS ALT2 TSL 3

Gene SCAF1, Length 662 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1-203ENST00000598359 ZNF879B4DU55 563 aa11.38□□□□□ -0.59
SCAF1-203ENST00000598359 AKR7A2O43488 359 aa11.38□□□□□ -0.59
SCAF1-203ENST00000598359 NDUFA2O43678 99 aa11.38□□□□□ -0.59
SCAF1-203ENST00000598359 TOX4O94842 621 aa11.38□□□□□ -0.59
SCAF1-203ENST00000598359 MMP9P14780 707 aa11.38□□□□□ -0.59
SCAF1-203ENST00000598359 ARF6P62330 175 aa11.38□□□□□ -0.59
SCAF1-203ENST00000598359 PRB3Q04118 309 aaPredicted RBP11.38□□□□□ -0.59
SCAF1-203ENST00000598359 IKZF1Q13422 519 aa11.38□□□□□ -0.59
SCAF1-203ENST00000598359 SLC9A3R2Q15599 337 aa11.38□□□□□ -0.59
SCAF1-203ENST00000598359 MICBQ29980 383 aa11.38□□□□□ -0.59
SCAF1-203ENST00000598359 CEP78Q5JTW2 689 aa11.38□□□□□ -0.59
SCAF1-203ENST00000598359 LCN1P1Q5VSP4 162 aa11.38□□□□□ -0.59
SCAF1-203ENST00000598359 CD276Q5ZPR3 534 aa11.38□□□□□ -0.59
SCAF1-203ENST00000598359 PLEKHG7Q6ZR37 379 aa11.38□□□□□ -0.59
SCAF1-203ENST00000598359 LINC00299Q6ZSB3 139 aa11.38□□□□□ -0.59
SCAF1-203ENST00000598359 C9orf139Q6ZV77 190 aa11.38□□□□□ -0.59
SCAF1-203ENST00000598359 COMMD2Q86X83 199 aa11.38□□□□□ -0.59
SCAF1-203ENST00000598359 PDZD9Q8IXQ8 264 aa11.38□□□□□ -0.59
SCAF1-203ENST00000598359 OR51E1Q8TCB6 317 aa11.38□□□□□ -0.59
SCAF1-203ENST00000598359 TMEM80Q96HE8 168 aa11.38□□□□□ -0.59
SCAF1-203ENST00000598359 RNF170Q96K19 258 aa11.38□□□□□ -0.59
SCAF1-203ENST00000598359 FAM71F1Q96KD3 344 aaPredicted RBP11.38□□□□□ -0.59
SCAF1-203ENST00000598359 PBOV1Q9GZY1 135 aa11.38□□□□□ -0.59
SCAF1-203ENST00000598359 TLNRD1Q9H1K6 362 aa11.38□□□□□ -0.59
SCAF1-203ENST00000598359 NIPAL2Q9H841 368 aa11.38□□□□□ -0.59
SCAF1-203ENST00000598359 FGF20Q9NP95 211 aaPredicted RBP11.38□□□□□ -0.59
SCAF1-203ENST00000598359 IKZF2Q9UKS7 526 aa11.38□□□□□ -0.59
SCAF1-203ENST00000598359 DIMT1Q9UNQ2 313 aaKnown RBP11.38□□□□□ -0.59
SCAF1-203ENST00000598359 LSM2Q9Y333 95 aaKnown RBP11.38□□□□□ -0.59
SCAF1-203ENST00000598359 MPC1Q9Y5U8 109 aa11.38□□□□□ -0.59
SCAF1-203ENST00000598359 DOCK11Q5JSL3 2073 aa11.37□□□□□ -0.59
SCAF1-203ENST00000598359 SNTNA6NMZ2 147 aa11.37□□□□□ -0.59
SCAF1-203ENST00000598359 SRRM5B3KS81 715 aa11.37□□□□□ -0.59
SCAF1-203ENST00000598359 CST4P01036 141 aa11.37□□□□□ -0.59
SCAF1-203ENST00000598359 HKR1P10072 659 aa11.37□□□□□ -0.59
SCAF1-203ENST00000598359 AMY2BP19961 511 aa11.37□□□□□ -0.59
SCAF1-203ENST00000598359 MTNR1AP48039 350 aa11.37□□□□□ -0.59
SCAF1-203ENST00000598359 GPM6AP51674 278 aa11.37□□□□□ -0.59
SCAF1-203ENST00000598359 GPR157Q5UAW9 335 aa11.37□□□□□ -0.59
SCAF1-203ENST00000598359 AADACL4Q5VUY2 407 aa11.37□□□□□ -0.59
SCAF1-203ENST00000598359 KCTD18Q6PI47 426 aaPredicted RBP11.37□□□□□ -0.59
SCAF1-203ENST00000598359 MEPCEQ7L2J0 689 aaKnown RBP11.37□□□□□ -0.59
SCAF1-203ENST00000598359 ZDHHC23Q8IYP9 409 aa11.37□□□□□ -0.59
SCAF1-203ENST00000598359 FTMTQ8N4E7 242 aa11.37□□□□□ -0.59
SCAF1-203ENST00000598359 SCCPDHQ8NBX0 429 aa11.37□□□□□ -0.59
SCAF1-203ENST00000598359 WDFY2Q96P53 400 aa11.37□□□□□ -0.59
SCAF1-203ENST00000598359 OR8B4Q96RC9 309 aa11.37□□□□□ -0.59
SCAF1-203ENST00000598359 CNN2Q99439 309 aaKnown RBP11.37□□□□□ -0.59
SCAF1-203ENST00000598359 MROQ9BYG7 248 aa11.37□□□□□ -0.59
SCAF1-203ENST00000598359 GPR84Q9NQS5 396 aa11.37□□□□□ -0.59
SCAF1-203ENST00000598359 GTF2A1LQ9UNN4 478 aa11.37□□□□□ -0.59
SCAF1-203ENST00000598359 CENPVL3A0A0U1RRI6 287 aa11.36□□□□□ -0.59
SCAF1-203ENST00000598359 ZNF816-ZNF321PA0A0X1KG74 233 aa11.36□□□□□ -0.59
SCAF1-203ENST00000598359 HOXA3O43365 443 aaPredicted RBP11.36□□□□□ -0.59
SCAF1-203ENST00000598359 RHBDL1O75783 438 aa11.36□□□□□ -0.59
SCAF1-203ENST00000598359 APOL3O95236 402 aa11.36□□□□□ -0.59
SCAF1-203ENST00000598359 RNASE1P07998 156 aaKnown RBP11.36□□□□□ -0.59
SCAF1-203ENST00000598359 MUC1P15941 1255 aaPredicted RBP11.36□□□□□ -0.59
SCAF1-203ENST00000598359 CD36P16671 472 aa11.36□□□□□ -0.59
SCAF1-203ENST00000598359 FAHP16930 419 aa11.36□□□□□ -0.59
SCAF1-203ENST00000598359 RIDAP52758 137 aaKnown RBP11.36□□□□□ -0.59
SCAF1-203ENST00000598359 DLX1P56177 255 aa11.36□□□□□ -0.59
SCAF1-203ENST00000598359 ROM1Q03395 351 aa11.36□□□□□ -0.59
SCAF1-203ENST00000598359 RAB40BQ12829 278 aa11.36□□□□□ -0.59
SCAF1-203ENST00000598359 SPCS2Q15005 226 aa11.36□□□□□ -0.59
SCAF1-203ENST00000598359 KLHL22Q53GT1 634 aa11.36□□□□□ -0.59
SCAF1-203ENST00000598359 METTL11BQ5VVY1 283 aa11.36□□□□□ -0.59
SCAF1-203ENST00000598359 STUMQ69YW2 141 aa11.36□□□□□ -0.59
SCAF1-203ENST00000598359 SLC35F2Q8IXU6 374 aa11.36□□□□□ -0.59
SCAF1-203ENST00000598359 ZNF679Q8IYX0 411 aa11.36□□□□□ -0.59
SCAF1-203ENST00000598359 PNLDC1Q8NA58 520 aaKnown RBP11.36□□□□□ -0.59
SCAF1-203ENST00000598359 LHX4Q969G2 390 aa11.36□□□□□ -0.59
SCAF1-203ENST00000598359 SLC25A28Q96A46 364 aa11.36□□□□□ -0.59
SCAF1-203ENST00000598359 TBX5Q99593 518 aa11.36□□□□□ -0.59
SCAF1-203ENST00000598359 DCUN1D5Q9BTE7 237 aa11.36□□□□□ -0.59
SCAF1-203ENST00000598359 JAM3Q9BX67 310 aa11.36□□□□□ -0.59
SCAF1-203ENST00000598359 SIRPDQ9H106 197 aa11.36□□□□□ -0.59
SCAF1-203ENST00000598359 ADGRL4Q9HBW9 690 aa11.36□□□□□ -0.59
SCAF1-203ENST00000598359 HAO2Q9NYQ3 351 aa11.36□□□□□ -0.59
SCAF1-203ENST00000598359 KAAG1Q9UBP8 84 aa11.36□□□□□ -0.59
SCAF1-203ENST00000598359 DNAJB11Q9UBS4 358 aa11.36□□□□□ -0.59
SCAF1-203ENST00000598359 RPUSD1Q9UJJ7 312 aaKnown RBP11.36□□□□□ -0.59
SCAF1-203ENST00000598359 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP11.36□□□□□ -0.59
SCAF1-203ENST00000598359 A0A0U1RQV5 110 aa11.35□□□□□ -0.59
SCAF1-203ENST00000598359 TMEM210A6NLX4 147 aa11.35□□□□□ -0.59
SCAF1-203ENST00000598359 ZNF732B4DXR9 585 aa11.35□□□□□ -0.59
SCAF1-203ENST00000598359 P2RY10O00398 339 aa11.35□□□□□ -0.59
SCAF1-203ENST00000598359 SRSF10O75494 262 aaKnown RBP11.35□□□□□ -0.59
SCAF1-203ENST00000598359 ZNF182P17025 639 aaPredicted RBP11.35□□□□□ -0.59
SCAF1-203ENST00000598359 DCTDP32321 178 aa11.35□□□□□ -0.59
SCAF1-203ENST00000598359 MAP2K3P46734 347 aa11.35□□□□□ -0.59
SCAF1-203ENST00000598359 NXNL2Q5VZ03 156 aa11.35□□□□□ -0.59
SCAF1-203ENST00000598359 DEGS2Q6QHC5 323 aa11.35□□□□□ -0.59
SCAF1-203ENST00000598359 ZNF322Q6U7Q0 402 aaPredicted RBP11.35□□□□□ -0.59
SCAF1-203ENST00000598359 MOB3CQ70IA8 216 aa11.35□□□□□ -0.59
SCAF1-203ENST00000598359 SSX6Q7RTT6 188 aa11.35□□□□□ -0.59
SCAF1-203ENST00000598359 NANOGP1Q8N7R0 232 aa11.35□□□□□ -0.59
SCAF1-203ENST00000598359 OR51G2Q8NGK0 314 aa11.35□□□□□ -0.59
SCAF1-203ENST00000598359 OR52I1Q8NGK6 324 aa11.35□□□□□ -0.59
SCAF1-203ENST00000598359 TBC1D15Q8TC07 691 aa11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms