RNA–Protein interactions for RNA: ENST00000598201.5

SHKBP1-216, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 2

Gene SHKBP1, Length 2,069 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-216ENST00000598201 DLL4Q9NR61 685 aa14.69□□□□□ -0.06
SHKBP1-216ENST00000598201 ZNF629Q9UEG4 869 aaPredicted RBP14.69□□□□□ -0.06
SHKBP1-216ENST00000598201 SCP2D1Q9UJQ7 156 aa14.69□□□□□ -0.06
SHKBP1-216ENST00000598201 SLC7A11Q9UPY5 501 aa14.69□□□□□ -0.06
SHKBP1-216ENST00000598201 NPTNQ9Y639 398 aa14.69□□□□□ -0.06
SHKBP1-216ENST00000598201 CACNA1BQ00975 2339 aa14.69□□□□□ -0.06
SHKBP1-216ENST00000598201 DISC1C4P0D8 188 aa14.69□□□□□ -0.06
SHKBP1-216ENST00000598201 ERVH48-1M5A8F1 160 aa14.69□□□□□ -0.06
SHKBP1-216ENST00000598201 LYZL6O75951 148 aa14.69□□□□□ -0.06
SHKBP1-216ENST00000598201 PMP2P02689 132 aa14.69□□□□□ -0.06
SHKBP1-216ENST00000598201 GABRR1P24046 479 aa14.69□□□□□ -0.06
SHKBP1-216ENST00000598201 APLNRP35414 380 aa14.69□□□□□ -0.06
SHKBP1-216ENST00000598201 ATPAF1Q5TC12 328 aaPredicted RBP14.69□□□□□ -0.06
SHKBP1-216ENST00000598201 SIGIRRQ6IA17 410 aa14.69□□□□□ -0.06
SHKBP1-216ENST00000598201 LAMTOR1Q6IAA8 161 aa14.69□□□□□ -0.06
SHKBP1-216ENST00000598201 VWA1Q6PCB0 445 aa14.69□□□□□ -0.06
SHKBP1-216ENST00000598201 MRPL21Q7Z2W9 205 aaKnown RBP14.69□□□□□ -0.06
SHKBP1-216ENST00000598201 CNEP1R1Q8N9A8 125 aa14.69□□□□□ -0.06
SHKBP1-216ENST00000598201 ZFAND1Q8TCF1 268 aa14.69□□□□□ -0.06
SHKBP1-216ENST00000598201 CPNE2Q96FN4 548 aaPredicted RBP14.69□□□□□ -0.06
SHKBP1-216ENST00000598201 WBP1Q96G27 269 aa14.69□□□□□ -0.06
SHKBP1-216ENST00000598201 SLC25A21Q9BQT8 299 aaPredicted RBP14.69□□□□□ -0.06
SHKBP1-216ENST00000598201 ZNF436Q9C0F3 470 aaPredicted RBP14.69□□□□□ -0.06
SHKBP1-216ENST00000598201 ZNF71Q9NQZ8 489 aaPredicted RBP14.69□□□□□ -0.06
SHKBP1-216ENST00000598201 SLC2A8Q9NY64 477 aa14.69□□□□□ -0.06
SHKBP1-216ENST00000598201 TMEM82A0PJX8 343 aa14.68□□□□□ -0.06
SHKBP1-216ENST00000598201 ATP1B3P54709 279 aa14.68□□□□□ -0.06
SHKBP1-216ENST00000598201 UBE2MP61081 183 aaKnown RBP14.68□□□□□ -0.06
SHKBP1-216ENST00000598201 FOXF2Q12947 444 aa14.68□□□□□ -0.06
SHKBP1-216ENST00000598201 MALLQ13021 153 aa14.68□□□□□ -0.06
SHKBP1-216ENST00000598201 PDZK1IP1Q13113 114 aa14.68□□□□□ -0.06
SHKBP1-216ENST00000598201 ARFRP1Q13795 201 aa14.68□□□□□ -0.06
SHKBP1-216ENST00000598201 MICBQ29980 383 aa14.68□□□□□ -0.06
SHKBP1-216ENST00000598201 ACSF3Q4G176 576 aaPredicted RBP14.68□□□□□ -0.06
SHKBP1-216ENST00000598201 C17orf107Q6ZR85 190 aa14.68□□□□□ -0.06
SHKBP1-216ENST00000598201 Q6ZS92 163 aa14.68□□□□□ -0.06
SHKBP1-216ENST00000598201 NLRC3Q7RTR2 1065 aa14.68□□□□□ -0.06
SHKBP1-216ENST00000598201 C6orf201Q7Z4U5 140 aa14.68□□□□□ -0.06
SHKBP1-216ENST00000598201 DPPA2Q7Z7J5 298 aa14.68□□□□□ -0.06
SHKBP1-216ENST00000598201 CALHM1Q8IU99 346 aa14.68□□□□□ -0.06
SHKBP1-216ENST00000598201 MUC20Q8N307 709 aaPredicted RBP14.68□□□□□ -0.06
SHKBP1-216ENST00000598201 OR11H4Q8NGC9 324 aa14.68□□□□□ -0.06
SHKBP1-216ENST00000598201 NANOS1Q8WY41 292 aaKnown RBP14.68□□□□□ -0.06
SHKBP1-216ENST00000598201 OCSTAMPQ9BR26 566 aa14.68□□□□□ -0.06
SHKBP1-216ENST00000598201 TMEM246Q9BRR3 403 aa14.68□□□□□ -0.06
SHKBP1-216ENST00000598201 PAPOLGQ9BWT3 736 aaKnown RBP14.68□□□□□ -0.06
SHKBP1-216ENST00000598201 OR51B6Q9H340 312 aa14.68□□□□□ -0.06
SHKBP1-216ENST00000598201 MGAT4CQ9UBM8 478 aa14.68□□□□□ -0.06
SHKBP1-216ENST00000598201 NBEAQ8NFP9 2946 aa14.68□□□□□ -0.06
SHKBP1-216ENST00000598201 CSTBP04080 98 aaKnown RBP14.67□□□□□ -0.06
SHKBP1-216ENST00000598201 SERPINA5P05154 406 aa14.67□□□□□ -0.06
SHKBP1-216ENST00000598201 CELA3BP08861 270 aa14.67□□□□□ -0.06
SHKBP1-216ENST00000598201 MPZP25189 248 aa14.67□□□□□ -0.06
SHKBP1-216ENST00000598201 PRDX4Q13162 271 aa14.67□□□□□ -0.06
SHKBP1-216ENST00000598201 TSC22D1Q15714 1073 aa14.67□□□□□ -0.06
SHKBP1-216ENST00000598201 TAF9Q16594 264 aa14.67□□□□□ -0.06
SHKBP1-216ENST00000598201 RFPL4BQ6ZWI9 263 aa14.67□□□□□ -0.06
SHKBP1-216ENST00000598201 TMED4Q7Z7H5 227 aa14.67□□□□□ -0.06
SHKBP1-216ENST00000598201 RBMXL3Q8N7X1 1067 aaKnown RBP14.67□□□□□ -0.06
SHKBP1-216ENST00000598201 SLC30A7Q8NEW0 376 aa14.67□□□□□ -0.06
SHKBP1-216ENST00000598201 OR4K15Q8NH41 348 aa14.67□□□□□ -0.06
SHKBP1-216ENST00000598201 WNT2BQ93097 391 aa14.67□□□□□ -0.06
SHKBP1-216ENST00000598201 RADILQ96JH8 1075 aa14.67□□□□□ -0.06
SHKBP1-216ENST00000598201 ZNF230Q9UIE0 474 aaPredicted RBP14.67□□□□□ -0.06
SHKBP1-216ENST00000598201 VSIG4Q9Y279 399 aa14.67□□□□□ -0.06
SHKBP1-216ENST00000598201 PIEZO2Q9H5I5 2752 aa14.67□□□□□ -0.06
SHKBP1-216ENST00000598201 SVILO95425 2214 aa14.67□□□□□ -0.06
SHKBP1-216ENST00000598201 AKR7A2O43488 359 aa14.67□□□□□ -0.06
SHKBP1-216ENST00000598201 TPOP07202 933 aa14.67□□□□□ -0.06
SHKBP1-216ENST00000598201 SFTPBP07988 381 aa14.67□□□□□ -0.06
SHKBP1-216ENST00000598201 C2orf68Q2NKX9 166 aa14.67□□□□□ -0.06
SHKBP1-216ENST00000598201 ZNF585AQ6P3V2 769 aa14.67□□□□□ -0.06
SHKBP1-216ENST00000598201 Q6ZT83 130 aa14.67□□□□□ -0.06
SHKBP1-216ENST00000598201 SPICQ8N5J4 248 aa14.67□□□□□ -0.06
SHKBP1-216ENST00000598201 HPSE2Q8WWQ2 592 aa14.67□□□□□ -0.06
SHKBP1-216ENST00000598201 MAFIPQ8WZ33 124 aa14.67□□□□□ -0.06
SHKBP1-216ENST00000598201 WDR89Q96FK6 387 aaPredicted RBP14.67□□□□□ -0.06
SHKBP1-216ENST00000598201 HYLS1Q96M11 299 aa14.67□□□□□ -0.06
SHKBP1-216ENST00000598201 TECTBQ96PL2 329 aa14.67□□□□□ -0.06
SHKBP1-216ENST00000598201 PRRT1Q99946 306 aa14.67□□□□□ -0.06
SHKBP1-216ENST00000598201 ALX4Q9H161 411 aaPredicted RBP14.67□□□□□ -0.06
SHKBP1-216ENST00000598201 LUZP4Q9P127 313 aa14.67□□□□□ -0.06
SHKBP1-216ENST00000598201 EIF3KQ9UBQ5 218 aaKnown RBP14.67□□□□□ -0.06
SHKBP1-216ENST00000598201 PLEKHA6Q9Y2H5 1048 aa14.67□□□□□ -0.06
SHKBP1-216ENST00000598201 OR2AT4A6NND4 320 aa14.66□□□□□ -0.06
SHKBP1-216ENST00000598201 G3V3Q6 166 aa14.66□□□□□ -0.06
SHKBP1-216ENST00000598201 TBPP20226 339 aa14.66□□□□□ -0.06
SHKBP1-216ENST00000598201 PIGYQ3MUY2 71 aa14.66□□□□□ -0.06
SHKBP1-216ENST00000598201 C4orf46Q504U0 113 aa14.66□□□□□ -0.06
SHKBP1-216ENST00000598201 NKAPLQ5M9Q1 402 aa14.66□□□□□ -0.06
SHKBP1-216ENST00000598201 ST6GALNAC5Q9BVH7 336 aa14.66□□□□□ -0.06
SHKBP1-216ENST00000598201 CHIAQ9BZP6 476 aa14.66□□□□□ -0.06
SHKBP1-216ENST00000598201 PIPOXQ9P0Z9 390 aa14.66□□□□□ -0.06
SHKBP1-216ENST00000598201 PQLC2LA1A4F0 135 aa14.65□□□□□ -0.06
SHKBP1-216ENST00000598201 FIGNL2A6NMB9 653 aa14.65□□□□□ -0.06
SHKBP1-216ENST00000598201 SERPINE3A8MV23 424 aa14.65□□□□□ -0.06
SHKBP1-216ENST00000598201 LILRA1O75019 489 aa14.65□□□□□ -0.06
SHKBP1-216ENST00000598201 OR4E1P0C645 316 aa14.65□□□□□ -0.06
SHKBP1-216ENST00000598201 SFTPCP11686 197 aa14.65□□□□□ -0.06
SHKBP1-216ENST00000598201 ZNF14P17017 642 aaPredicted RBP14.65□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms