RNA–Protein interactions for RNA: ENST00000595631.5

SHKBP1-207, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 4

Gene SHKBP1, Length 552 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-207ENST00000595631 GNB2P62879 340 aa11.48□□□□□ -0.57
SHKBP1-207ENST00000595631 CNN3Q15417 329 aaKnown RBP11.48□□□□□ -0.57
SHKBP1-207ENST00000595631 DMKNQ6E0U4 476 aaPredicted RBP11.48□□□□□ -0.57
SHKBP1-207ENST00000595631 FAHD2BQ6P2I3 314 aaPredicted RBP11.48□□□□□ -0.57
SHKBP1-207ENST00000595631 ZNF841Q6ZN19 808 aa11.48□□□□□ -0.57
SHKBP1-207ENST00000595631 FAM216BQ8N7L0 139 aa11.48□□□□□ -0.57
SHKBP1-207ENST00000595631 HAVCR2Q8TDQ0 301 aa11.48□□□□□ -0.57
SHKBP1-207ENST00000595631 PP6455Q8WZ26 134 aa11.48□□□□□ -0.57
SHKBP1-207ENST00000595631 RFT1Q96AA3 541 aa11.48□□□□□ -0.57
SHKBP1-207ENST00000595631 C10orf35Q96D05 121 aa11.48□□□□□ -0.57
SHKBP1-207ENST00000595631 ORAI1Q96D31 301 aa11.48□□□□□ -0.57
SHKBP1-207ENST00000595631 FAHD2AQ96GK7 314 aa11.48□□□□□ -0.57
SHKBP1-207ENST00000595631 SPACA5Q96QH8 159 aa11.48□□□□□ -0.57
SHKBP1-207ENST00000595631 ZNF184Q99676 751 aaPredicted RBP11.48□□□□□ -0.57
SHKBP1-207ENST00000595631 TMEM160Q9NX00 188 aa11.48□□□□□ -0.57
SHKBP1-207ENST00000595631 DHDHQ9UQ10 334 aa11.48□□□□□ -0.57
SHKBP1-207ENST00000595631 LRCH1Q9Y2L9 728 aa11.48□□□□□ -0.57
SHKBP1-207ENST00000595631 F8VVB4 439 aa11.47□□□□□ -0.57
SHKBP1-207ENST00000595631 F8VWA3 439 aa11.47□□□□□ -0.57
SHKBP1-207ENST00000595631 SERPINA3P01011 423 aa11.47□□□□□ -0.57
SHKBP1-207ENST00000595631 MUC1P15941 1255 aaPredicted RBP11.47□□□□□ -0.57
SHKBP1-207ENST00000595631 CRHBPP24387 322 aa11.47□□□□□ -0.57
SHKBP1-207ENST00000595631 FUT6P51993 359 aa11.47□□□□□ -0.57
SHKBP1-207ENST00000595631 KCNJ8Q15842 424 aa11.47□□□□□ -0.57
SHKBP1-207ENST00000595631 MICBQ29980 383 aa11.47□□□□□ -0.57
SHKBP1-207ENST00000595631 CHRFAM7AQ494W8 412 aa11.47□□□□□ -0.57
SHKBP1-207ENST00000595631 DCAF12L2Q5VW00 463 aa11.47□□□□□ -0.57
SHKBP1-207ENST00000595631 WDR25Q64LD2 544 aaPredicted RBP11.47□□□□□ -0.57
SHKBP1-207ENST00000595631 STUMQ69YW2 141 aa11.47□□□□□ -0.57
SHKBP1-207ENST00000595631 ASPHD2Q6ICH7 369 aa11.47□□□□□ -0.57
SHKBP1-207ENST00000595631 C1orf229Q6ZS94 237 aaPredicted RBP11.47□□□□□ -0.57
SHKBP1-207ENST00000595631 UTS2BQ765I0 119 aa11.47□□□□□ -0.57
SHKBP1-207ENST00000595631 NLRC3Q7RTR2 1065 aa11.47□□□□□ -0.57
SHKBP1-207ENST00000595631 ZNF573Q86YE8 665 aa11.47□□□□□ -0.57
SHKBP1-207ENST00000595631 POC1AQ8NBT0 407 aa11.47□□□□□ -0.57
SHKBP1-207ENST00000595631 ZNF671Q8TAW3 534 aa11.47□□□□□ -0.57
SHKBP1-207ENST00000595631 GHSRQ92847 366 aa11.47□□□□□ -0.57
SHKBP1-207ENST00000595631 MYDGFQ969H8 173 aa11.47□□□□□ -0.57
SHKBP1-207ENST00000595631 SMIM19Q96E16 107 aa11.47□□□□□ -0.57
SHKBP1-207ENST00000595631 BORCS8Q96FH0 119 aa11.47□□□□□ -0.57
SHKBP1-207ENST00000595631 POM121Q96HA1 1249 aa11.47□□□□□ -0.57
SHKBP1-207ENST00000595631 PGLYRP3Q96LB9 341 aa11.47□□□□□ -0.57
SHKBP1-207ENST00000595631 OPALINQ96PE5 141 aa11.47□□□□□ -0.57
SHKBP1-207ENST00000595631 TECTBQ96PL2 329 aa11.47□□□□□ -0.57
SHKBP1-207ENST00000595631 OR5M11Q96RB7 305 aa11.47□□□□□ -0.57
SHKBP1-207ENST00000595631 BEX2Q9BXY8 128 aa11.47□□□□□ -0.57
SHKBP1-207ENST00000595631 TMPRSS13Q9BYE2 586 aa11.47□□□□□ -0.57
SHKBP1-207ENST00000595631 SHARPINQ9H0F6 387 aa11.47□□□□□ -0.57
SHKBP1-207ENST00000595631 DUSP21Q9H596 190 aa11.47□□□□□ -0.57
SHKBP1-207ENST00000595631 DNAJB11Q9UBS4 358 aa11.47□□□□□ -0.57
SHKBP1-207ENST00000595631 CLN8Q9UBY8 286 aa11.47□□□□□ -0.57
SHKBP1-207ENST00000595631 TPRKBQ9Y3C4 175 aa11.47□□□□□ -0.57
SHKBP1-207ENST00000595631 SETD2Q9BYW2 2564 aaPredicted RBP11.46□□□□□ -0.57
SHKBP1-207ENST00000595631 C2CD3Q4AC94 2353 aa11.46□□□□□ -0.57
SHKBP1-207ENST00000595631 C22orf46C9J442 243 aa11.46□□□□□ -0.57
SHKBP1-207ENST00000595631 TMPRSS2O15393 492 aa11.46□□□□□ -0.57
SHKBP1-207ENST00000595631 PGA5P0DJD9 388 aa11.46□□□□□ -0.57
SHKBP1-207ENST00000595631 ADRA2CP18825 462 aa11.46□□□□□ -0.57
SHKBP1-207ENST00000595631 MPZP25189 248 aa11.46□□□□□ -0.57
SHKBP1-207ENST00000595631 POU3F4P49335 361 aa11.46□□□□□ -0.57
SHKBP1-207ENST00000595631 CEBPDP49716 269 aaPredicted RBP11.46□□□□□ -0.57
SHKBP1-207ENST00000595631 RIPPLY3P57055 190 aa11.46□□□□□ -0.57
SHKBP1-207ENST00000595631 PAX2Q02962 417 aa11.46□□□□□ -0.57
SHKBP1-207ENST00000595631 IRF3Q14653 427 aa11.46□□□□□ -0.57
SHKBP1-207ENST00000595631 CRIP3Q6Q6R5 217 aa11.46□□□□□ -0.57
SHKBP1-207ENST00000595631 ACP7Q6ZNF0 438 aa11.46□□□□□ -0.57
SHKBP1-207ENST00000595631 PARP16Q8N5Y8 322 aa11.46□□□□□ -0.57
SHKBP1-207ENST00000595631 OR51A2Q8NGJ7 313 aa11.46□□□□□ -0.57
SHKBP1-207ENST00000595631 ANGPTL6Q8NI99 470 aa11.46□□□□□ -0.57
SHKBP1-207ENST00000595631 GPR148Q8TDV2 347 aa11.46□□□□□ -0.57
SHKBP1-207ENST00000595631 SLAMF9Q96A28 289 aa11.46□□□□□ -0.57
SHKBP1-207ENST00000595631 TMIGD2Q96BF3 282 aa11.46□□□□□ -0.57
SHKBP1-207ENST00000595631 NKX3-1Q99801 234 aaPredicted RBP11.46□□□□□ -0.57
SHKBP1-207ENST00000595631 MND1Q9BWT6 205 aa11.46□□□□□ -0.57
SHKBP1-207ENST00000595631 CDCA4Q9BXL8 241 aa11.46□□□□□ -0.57
SHKBP1-207ENST00000595631 PKIBQ9C010 78 aa11.46□□□□□ -0.57
SHKBP1-207ENST00000595631 ZCCHC4Q9H5U6 513 aa11.46□□□□□ -0.57
SHKBP1-207ENST00000595631 TAS2R4Q9NYW5 299 aa11.46□□□□□ -0.57
SHKBP1-207ENST00000595631 NLKQ9UBE8 527 aa11.46□□□□□ -0.57
SHKBP1-207ENST00000595631 OR5V1Q9UGF6 321 aa11.46□□□□□ -0.57
SHKBP1-207ENST00000595631 ERGIC3Q9Y282 383 aa11.46□□□□□ -0.57
SHKBP1-207ENST00000595631 ZNF281Q9Y2X9 895 aa11.46□□□□□ -0.57
SHKBP1-207ENST00000595631 POLR3KQ9Y2Y1 108 aaPredicted RBP11.46□□□□□ -0.57
SHKBP1-207ENST00000595631 LSM2Q9Y333 95 aaKnown RBP11.46□□□□□ -0.57
SHKBP1-207ENST00000595631 DSCAML1Q8TD84 2053 aa11.46□□□□□ -0.57
SHKBP1-207ENST00000595631 IGKV1D-17A0A075B6S4 117 aa11.45□□□□□ -0.58
SHKBP1-207ENST00000595631 LOC105371242A0A075B767 164 aa11.45□□□□□ -0.58
SHKBP1-207ENST00000595631 A0A0G2JMP0 313 aa11.45□□□□□ -0.58
SHKBP1-207ENST00000595631 A0A0X1KG70 313 aa11.45□□□□□ -0.58
SHKBP1-207ENST00000595631 OR2AT4A6NND4 320 aa11.45□□□□□ -0.58
SHKBP1-207ENST00000595631 DVL1O14640 695 aa11.45□□□□□ -0.58
SHKBP1-207ENST00000595631 SPRY1O43609 319 aaPredicted RBP11.45□□□□□ -0.58
SHKBP1-207ENST00000595631 RGS10O43665 173 aa11.45□□□□□ -0.58
SHKBP1-207ENST00000595631 RPSAP08865 295 aaKnown RBP11.45□□□□□ -0.58
SHKBP1-207ENST00000595631 OCM2P0CE71 109 aa11.45□□□□□ -0.58
SHKBP1-207ENST00000595631 PSG2P11465 335 aa11.45□□□□□ -0.58
SHKBP1-207ENST00000595631 CELP19835 753 aa11.45□□□□□ -0.58
SHKBP1-207ENST00000595631 MAP2K4P45985 399 aa11.45□□□□□ -0.58
SHKBP1-207ENST00000595631 RBP2P50120 134 aa11.45□□□□□ -0.58
SHKBP1-207ENST00000595631 ATP1B3P54709 279 aa11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 74.2 ms