RNA–Protein interactions for RNA: ENST00000595523.5

SHKBP1-206, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 4

Gene SHKBP1, Length 575 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-206ENST00000595523 TRMT10AQ8TBZ6 339 aaKnown RBP9.09□□□□□ -0.95
SHKBP1-206ENST00000595523 NPRL2Q8WTW4 380 aa9.09□□□□□ -0.95
SHKBP1-206ENST00000595523 NRG4Q8WWG1 115 aa9.09□□□□□ -0.95
SHKBP1-206ENST00000595523 ST8SIA4Q92187 359 aa9.09□□□□□ -0.95
SHKBP1-206ENST00000595523 NRIP2Q9BQI9 281 aa9.09□□□□□ -0.95
SHKBP1-206ENST00000595523 ADI1Q9BV57 179 aa9.09□□□□□ -0.95
SHKBP1-206ENST00000595523 DNTTIP1Q9H147 329 aa9.09□□□□□ -0.95
SHKBP1-206ENST00000595523 OCEL1Q9H607 264 aa9.09□□□□□ -0.95
SHKBP1-206ENST00000595523 DCLRE1BQ9H816 532 aa9.09□□□□□ -0.95
SHKBP1-206ENST00000595523 PLEKHA1Q9HB21 404 aa9.09□□□□□ -0.95
SHKBP1-206ENST00000595523 INPP5EQ9NRR6 644 aa9.09□□□□□ -0.95
SHKBP1-206ENST00000595523 NLKQ9UBE8 527 aa9.09□□□□□ -0.95
SHKBP1-206ENST00000595523 DNAJB11Q9UBS4 358 aa9.09□□□□□ -0.95
SHKBP1-206ENST00000595523 ZNF69Q9UC07 566 aa9.09□□□□□ -0.95
SHKBP1-206ENST00000595523 SOX21Q9Y651 276 aaPredicted RBP9.09□□□□□ -0.95
SHKBP1-206ENST00000595523 KIAA2026Q5HYC2 2103 aa9.08□□□□□ -0.96
SHKBP1-206ENST00000595523 IGHV3OR16-10A0A075B7F0 116 aa9.08□□□□□ -0.96
SHKBP1-206ENST00000595523 TRAV40A0A0B4J280 105 aa9.08□□□□□ -0.96
SHKBP1-206ENST00000595523 FAM230AA0A1W2PPH8 454 aa9.08□□□□□ -0.96
SHKBP1-206ENST00000595523 ERICH4A6NGS2 130 aa9.08□□□□□ -0.96
SHKBP1-206ENST00000595523 SIGLEC5O15389 551 aa9.08□□□□□ -0.96
SHKBP1-206ENST00000595523 NOS1APO75052 506 aaPredicted RBP9.08□□□□□ -0.96
SHKBP1-206ENST00000595523 ZFPL1O95159 310 aa9.08□□□□□ -0.96
SHKBP1-206ENST00000595523 PLATP00750 562 aa9.08□□□□□ -0.96
SHKBP1-206ENST00000595523 SFTPBP07988 381 aa9.08□□□□□ -0.96
SHKBP1-206ENST00000595523 PSG2P11465 335 aa9.08□□□□□ -0.96
SHKBP1-206ENST00000595523 CAPGP40121 348 aa9.08□□□□□ -0.96
SHKBP1-206ENST00000595523 GTF2A1P52655 376 aaPredicted RBP9.08□□□□□ -0.96
SHKBP1-206ENST00000595523 HILS1P60008 231 aa9.08□□□□□ -0.96
SHKBP1-206ENST00000595523 ERVK11-1P61568 191 aa9.08□□□□□ -0.96
SHKBP1-206ENST00000595523 IKZF1Q13422 519 aa9.08□□□□□ -0.96
SHKBP1-206ENST00000595523 TMEM244Q5VVB8 128 aa9.08□□□□□ -0.96
SHKBP1-206ENST00000595523 CD276Q5ZPR3 534 aa9.08□□□□□ -0.96
SHKBP1-206ENST00000595523 XAF1Q6GPH4 301 aa9.08□□□□□ -0.96
SHKBP1-206ENST00000595523 ACP7Q6ZNF0 438 aa9.08□□□□□ -0.96
SHKBP1-206ENST00000595523 ZNF573Q86YE8 665 aa9.08□□□□□ -0.96
SHKBP1-206ENST00000595523 EGFL6Q8IUX8 553 aa9.08□□□□□ -0.96
SHKBP1-206ENST00000595523 BATF2Q8N1L9 274 aa9.08□□□□□ -0.96
SHKBP1-206ENST00000595523 CCDC54Q8NEL0 328 aa9.08□□□□□ -0.96
SHKBP1-206ENST00000595523 ZNF671Q8TAW3 534 aa9.08□□□□□ -0.96
SHKBP1-206ENST00000595523 FBLIM1Q8WUP2 373 aa9.08□□□□□ -0.96
SHKBP1-206ENST00000595523 PP6455Q8WZ26 134 aa9.08□□□□□ -0.96
SHKBP1-206ENST00000595523 TMEM158Q8WZ71 300 aa9.08□□□□□ -0.96
SHKBP1-206ENST00000595523 TMIGD2Q96BF3 282 aa9.08□□□□□ -0.96
SHKBP1-206ENST00000595523 C10orf35Q96D05 121 aa9.08□□□□□ -0.96
SHKBP1-206ENST00000595523 TBX15Q96SF7 602 aa9.08□□□□□ -0.96
SHKBP1-206ENST00000595523 SIRPDQ9H106 197 aa9.08□□□□□ -0.96
SHKBP1-206ENST00000595523 HES4Q9HCC6 221 aa9.08□□□□□ -0.96
SHKBP1-206ENST00000595523 ESM1Q9NQ30 184 aa9.08□□□□□ -0.96
SHKBP1-206ENST00000595523 RPUSD1Q9UJJ7 312 aaKnown RBP9.08□□□□□ -0.96
SHKBP1-206ENST00000595523 NUP50Q9UKX7 468 aa9.08□□□□□ -0.96
SHKBP1-206ENST00000595523 MAB21L2Q9Y586 359 aa9.08□□□□□ -0.96
SHKBP1-206ENST00000595523 A0A0A6YYJ9 748 aa9.07□□□□□ -0.96
SHKBP1-206ENST00000595523 ZNF879B4DU55 563 aa9.07□□□□□ -0.96
SHKBP1-206ENST00000595523 F8VVB4 439 aa9.07□□□□□ -0.96
SHKBP1-206ENST00000595523 F8VWA3 439 aa9.07□□□□□ -0.96
SHKBP1-206ENST00000595523 H0YAE9 185 aa9.07□□□□□ -0.96
SHKBP1-206ENST00000595523 ACAA1P09110 424 aaPredicted RBP9.07□□□□□ -0.96
SHKBP1-206ENST00000595523 CEBPDP49716 269 aaPredicted RBP9.07□□□□□ -0.96
SHKBP1-206ENST00000595523 FUT6P51993 359 aa9.07□□□□□ -0.96
SHKBP1-206ENST00000595523 IL13RA1P78552 427 aa9.07□□□□□ -0.96
SHKBP1-206ENST00000595523 SLC34A1Q06495 639 aa9.07□□□□□ -0.96
SHKBP1-206ENST00000595523 IL24Q13007 206 aa9.07□□□□□ -0.96
SHKBP1-206ENST00000595523 SCGB2A2Q13296 93 aa9.07□□□□□ -0.96
SHKBP1-206ENST00000595523 IL18R1Q13478 541 aa9.07□□□□□ -0.96
SHKBP1-206ENST00000595523 C11orf91Q3C1V1 193 aa9.07□□□□□ -0.96
SHKBP1-206ENST00000595523 OR2G6Q5TZ20 316 aa9.07□□□□□ -0.96
SHKBP1-206ENST00000595523 CRIP3Q6Q6R5 217 aa9.07□□□□□ -0.96
SHKBP1-206ENST00000595523 USP43Q70EL4 1123 aa9.07□□□□□ -0.96
SHKBP1-206ENST00000595523 UTS2BQ765I0 119 aa9.07□□□□□ -0.96
SHKBP1-206ENST00000595523 SLC36A1Q7Z2H8 476 aa9.07□□□□□ -0.96
SHKBP1-206ENST00000595523 RNF144BQ7Z419 303 aa9.07□□□□□ -0.96
SHKBP1-206ENST00000595523 CD177Q8N6Q3 437 aa9.07□□□□□ -0.96
SHKBP1-206ENST00000595523 ZNRF1Q8ND25 227 aa9.07□□□□□ -0.96
SHKBP1-206ENST00000595523 LY6G5BQ8NDX9 201 aa9.07□□□□□ -0.96
SHKBP1-206ENST00000595523 SETD9Q8NE22 299 aa9.07□□□□□ -0.96
SHKBP1-206ENST00000595523 RPS4Y2Q8TD47 263 aa9.07□□□□□ -0.96
SHKBP1-206ENST00000595523 RGP1Q92546 391 aaPredicted RBP9.07□□□□□ -0.96
SHKBP1-206ENST00000595523 TFAP2CQ92754 450 aa9.07□□□□□ -0.96
SHKBP1-206ENST00000595523 FGGYQ96C11 551 aa9.07□□□□□ -0.96
SHKBP1-206ENST00000595523 ZNF48Q96MX3 618 aaPredicted RBP9.07□□□□□ -0.96
SHKBP1-206ENST00000595523 PDCD1LG2Q9BQ51 273 aa9.07□□□□□ -0.96
SHKBP1-206ENST00000595523 C19orf24Q9BVV8 132 aa9.07□□□□□ -0.96
SHKBP1-206ENST00000595523 PKIBQ9C010 78 aa9.07□□□□□ -0.96
SHKBP1-206ENST00000595523 ELL3Q9HB65 397 aaPredicted RBP9.07□□□□□ -0.96
SHKBP1-206ENST00000595523 RASL12Q9NYN1 266 aa9.07□□□□□ -0.96
SHKBP1-206ENST00000595523 MTCH1Q9NZJ7 389 aa9.07□□□□□ -0.96
SHKBP1-206ENST00000595523 CLEC2DQ9UHP7 191 aa9.07□□□□□ -0.96
SHKBP1-206ENST00000595523 HHLA2Q9UM44 414 aa9.07□□□□□ -0.96
SHKBP1-206ENST00000595523 DIMT1Q9UNQ2 313 aaKnown RBP9.07□□□□□ -0.96
SHKBP1-206ENST00000595523 HSPE1-MOB4S4R3N1 261 aa9.07□□□□□ -0.96
SHKBP1-206ENST00000595523 NKX6-3A6NJ46 265 aa9.06□□□□□ -0.96
SHKBP1-206ENST00000595523 RFPL4AA6NLU0 287 aa9.06□□□□□ -0.96
SHKBP1-206ENST00000595523 RFPL4AL1F8VTS6 287 aa9.06□□□□□ -0.96
SHKBP1-206ENST00000595523 NDUFB3O43676 98 aa9.06□□□□□ -0.96
SHKBP1-206ENST00000595523 XPNPEP2O43895 674 aa9.06□□□□□ -0.96
SHKBP1-206ENST00000595523 GATBO75879 557 aaKnown RBP9.06□□□□□ -0.96
SHKBP1-206ENST00000595523 ECDO95905 644 aaPredicted RBP9.06□□□□□ -0.96
SHKBP1-206ENST00000595523 LALBAP00709 142 aa9.06□□□□□ -0.96
SHKBP1-206ENST00000595523 LIPFP07098 398 aa9.06□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms