RNA–Protein interactions for RNA: ENST00000594504.5

UPF1-203, Transcript of UPF1, RNA helicase and ATPase, humanhuman

TSL 3

Gene UPF1, Length 559 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF1-203ENST00000594504 RELBQ01201 579 aa10.34□□□□□ -0.75
UPF1-203ENST00000594504 CEACAM21Q3KPI0 293 aa10.34□□□□□ -0.75
UPF1-203ENST00000594504 CLVS2Q5SYC1 327 aa10.34□□□□□ -0.75
UPF1-203ENST00000594504 TMEM244Q5VVB8 128 aa10.34□□□□□ -0.75
UPF1-203ENST00000594504 Q6YL49 198 aa10.34□□□□□ -0.75
UPF1-203ENST00000594504 TMPRSS11AQ6ZMR5 421 aa10.34□□□□□ -0.75
UPF1-203ENST00000594504 WDR86Q86TI4 376 aa10.34□□□□□ -0.75
UPF1-203ENST00000594504 OR1M1Q8NGA1 313 aa10.34□□□□□ -0.75
UPF1-203ENST00000594504 HPSE2Q8WWQ2 592 aa10.34□□□□□ -0.75
UPF1-203ENST00000594504 GGHQ92820 318 aa10.34□□□□□ -0.75
UPF1-203ENST00000594504 TMEM80Q96HE8 168 aa10.34□□□□□ -0.75
UPF1-203ENST00000594504 TBX15Q96SF7 602 aa10.34□□□□□ -0.75
UPF1-203ENST00000594504 ANKRD60Q9BZ19 345 aa10.34□□□□□ -0.75
UPF1-203ENST00000594504 SLITRK2Q9H156 845 aa10.34□□□□□ -0.75
UPF1-203ENST00000594504 PRDM13Q9H4Q3 707 aa10.34□□□□□ -0.75
UPF1-203ENST00000594504 ISG20L2Q9H9L3 353 aaKnown RBP10.34□□□□□ -0.75
UPF1-203ENST00000594504 PLEKHA1Q9HB21 404 aa10.34□□□□□ -0.75
UPF1-203ENST00000594504 SMURF1Q9HCE7 757 aa10.34□□□□□ -0.75
UPF1-203ENST00000594504 C1orf123Q9NWV4 160 aa10.34□□□□□ -0.75
UPF1-203ENST00000594504 CHCHD3Q9NX63 227 aaKnown RBP10.34□□□□□ -0.75
UPF1-203ENST00000594504 FRRS1LQ9P0K9 344 aa10.34□□□□□ -0.75
UPF1-203ENST00000594504 RNF7Q9UBF6 113 aa10.34□□□□□ -0.75
UPF1-203ENST00000594504 PSORS1C1Q9UIG5 152 aa10.34□□□□□ -0.75
UPF1-203ENST00000594504 CAB39Q9Y376 341 aaPredicted RBP10.34□□□□□ -0.75
UPF1-203ENST00000594504 CENPVL3A0A0U1RRI6 287 aa10.33□□□□□ -0.76
UPF1-203ENST00000594504 SRRM5B3KS81 715 aa10.33□□□□□ -0.76
UPF1-203ENST00000594504 XPNPEP2O43895 674 aa10.33□□□□□ -0.76
UPF1-203ENST00000594504 TOX4O94842 621 aa10.33□□□□□ -0.76
UPF1-203ENST00000594504 NRASP01111 189 aa10.33□□□□□ -0.76
UPF1-203ENST00000594504 GYPAP02724 150 aa10.33□□□□□ -0.76
UPF1-203ENST00000594504 ISG15P05161 165 aa10.33□□□□□ -0.76
UPF1-203ENST00000594504 RPSAP08865 295 aaKnown RBP10.33□□□□□ -0.76
UPF1-203ENST00000594504 MYF6P23409 242 aa10.33□□□□□ -0.76
UPF1-203ENST00000594504 CFHR2P36980 270 aa10.33□□□□□ -0.76
UPF1-203ENST00000594504 VHLP40337 213 aa10.33□□□□□ -0.76
UPF1-203ENST00000594504 TGM4P49221 684 aa10.33□□□□□ -0.76
UPF1-203ENST00000594504 ETV1P50549 477 aa10.33□□□□□ -0.76
UPF1-203ENST00000594504 GBX2P52951 348 aaPredicted RBP10.33□□□□□ -0.76
UPF1-203ENST00000594504 ST3GAL4Q11206 333 aa10.33□□□□□ -0.76
UPF1-203ENST00000594504 ALKBH1Q13686 389 aaKnown RBP10.33□□□□□ -0.76
UPF1-203ENST00000594504 FAM76BQ5HYJ3 339 aa10.33□□□□□ -0.76
UPF1-203ENST00000594504 GPR157Q5UAW9 335 aa10.33□□□□□ -0.76
UPF1-203ENST00000594504 PLCXD3Q63HM9 321 aa10.33□□□□□ -0.76
UPF1-203ENST00000594504 TMEM42Q69YG0 159 aa10.33□□□□□ -0.76
UPF1-203ENST00000594504 FGFRL1Q8N441 504 aa10.33□□□□□ -0.76
UPF1-203ENST00000594504 BPIFB6Q8NFQ5 453 aa10.33□□□□□ -0.76
UPF1-203ENST00000594504 OR5A2Q8NGI9 324 aa10.33□□□□□ -0.76
UPF1-203ENST00000594504 C10orf35Q96D05 121 aa10.33□□□□□ -0.76
UPF1-203ENST00000594504 RNF170Q96K19 258 aa10.33□□□□□ -0.76
UPF1-203ENST00000594504 CHIAQ9BZP6 476 aa10.33□□□□□ -0.76
UPF1-203ENST00000594504 TLNRD1Q9H1K6 362 aa10.33□□□□□ -0.76
UPF1-203ENST00000594504 ERVK-18Q9QC07 812 aa10.33□□□□□ -0.76
UPF1-203ENST00000594504 TENM1Q9UKZ4 2725 aa10.32□□□□□ -0.76
UPF1-203ENST00000594504 IGHV3OR15-7A0A075B7D8 119 aa10.32□□□□□ -0.76
UPF1-203ENST00000594504 hCG_1807616A0A1W2PRN6 198 aa10.32□□□□□ -0.76
UPF1-203ENST00000594504 OR5B21A6NL26 309 aa10.32□□□□□ -0.76
UPF1-203ENST00000594504 OR4C45A6NMZ5 311 aa10.32□□□□□ -0.76
UPF1-203ENST00000594504 ZNF879B4DU55 563 aa10.32□□□□□ -0.76
UPF1-203ENST00000594504 LGALS8O00214 317 aa10.32□□□□□ -0.76
UPF1-203ENST00000594504 ADAM20O43506 726 aa10.32□□□□□ -0.76
UPF1-203ENST00000594504 ENSAO43768 121 aaKnown RBP10.32□□□□□ -0.76
UPF1-203ENST00000594504 CRYBA1P05813 215 aa10.32□□□□□ -0.76
UPF1-203ENST00000594504 MELTFP08582 738 aa10.32□□□□□ -0.76
UPF1-203ENST00000594504 CCDC159P0C7I6 412 aa10.32□□□□□ -0.76
UPF1-203ENST00000594504 MMP9P14780 707 aa10.32□□□□□ -0.76
UPF1-203ENST00000594504 GPM6AP51674 278 aa10.32□□□□□ -0.76
UPF1-203ENST00000594504 KRTAP10-3P60369 221 aa10.32□□□□□ -0.76
UPF1-203ENST00000594504 ARF6P62330 175 aa10.32□□□□□ -0.76
UPF1-203ENST00000594504 GNG3P63215 75 aa10.32□□□□□ -0.76
UPF1-203ENST00000594504 CCDC58Q4VC31 144 aa10.32□□□□□ -0.76
UPF1-203ENST00000594504 CEP78Q5JTW2 689 aa10.32□□□□□ -0.76
UPF1-203ENST00000594504 C6orf141Q5SZD1 244 aa10.32□□□□□ -0.76
UPF1-203ENST00000594504 KCTD8Q6ZWB6 473 aa10.32□□□□□ -0.76
UPF1-203ENST00000594504 MOB3CQ70IA8 216 aa10.32□□□□□ -0.76
UPF1-203ENST00000594504 AHSA2Q719I0 299 aa10.32□□□□□ -0.76
UPF1-203ENST00000594504 C11orf53Q8IXP5 236 aa10.32□□□□□ -0.76
UPF1-203ENST00000594504 PDZD9Q8IXQ8 264 aa10.32□□□□□ -0.76
UPF1-203ENST00000594504 RDH10Q8IZV5 341 aa10.32□□□□□ -0.76
UPF1-203ENST00000594504 ZNF676Q8N7Q3 588 aa10.32□□□□□ -0.76
UPF1-203ENST00000594504 OR52N1Q8NH53 320 aa10.32□□□□□ -0.76
UPF1-203ENST00000594504 LHX4Q969G2 390 aa10.32□□□□□ -0.76
UPF1-203ENST00000594504 FGF23Q9GZV9 251 aaPredicted RBP10.32□□□□□ -0.76
UPF1-203ENST00000594504 TRIM36Q9NQ86 728 aa10.32□□□□□ -0.76
UPF1-203ENST00000594504 FKBP14Q9NWM8 211 aa10.32□□□□□ -0.76
UPF1-203ENST00000594504 C1RLQ9NZP8 487 aa10.32□□□□□ -0.76
UPF1-203ENST00000594504 HHLA2Q9UM44 414 aa10.32□□□□□ -0.76
UPF1-203ENST00000594504 A0A1B0GW55 424 aa10.31□□□□□ -0.76
UPF1-203ENST00000594504 ANKRD61A6NGH8 418 aa10.31□□□□□ -0.76
UPF1-203ENST00000594504 TMEM212A6NML5 194 aa10.31□□□□□ -0.76
UPF1-203ENST00000594504 ZNF732B4DXR9 585 aa10.31□□□□□ -0.76
UPF1-203ENST00000594504 E9PI62 339 aa10.31□□□□□ -0.76
UPF1-203ENST00000594504 H3BSH0 61 aa10.31□□□□□ -0.76
UPF1-203ENST00000594504 SLC1A7O00341 560 aa10.31□□□□□ -0.76
UPF1-203ENST00000594504 CDIPTO14735 213 aa10.31□□□□□ -0.76
UPF1-203ENST00000594504 KNG1P01042 644 aa10.31□□□□□ -0.76
UPF1-203ENST00000594504 LHBP01229 141 aa10.31□□□□□ -0.76
UPF1-203ENST00000594504 DUX4L2P0CJ85 424 aa10.31□□□□□ -0.76
UPF1-203ENST00000594504 DUX4L3P0CJ86 424 aa10.31□□□□□ -0.76
UPF1-203ENST00000594504 DUX4L4P0CJ87 422 aa10.31□□□□□ -0.76
UPF1-203ENST00000594504 DUX4L5P0CJ88 424 aa10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms