RNA–Protein interactions for RNA: ENST00000593977.1

LINC00649-204, long intergenic non-protein coding RNA 649, humanhuman

TSL 5 BASIC

Gene LINC00649, Length 640 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00649-204ENST00000593977 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP3.4□□□□□ -1.87
LINC00649-204ENST00000593977 KIR2DL5BA0A0G2JN68 375 aa3.4□□□□□ -1.87
LINC00649-204ENST00000593977 KIR2DL5BA0A0G2JPC4 375 aa3.4□□□□□ -1.87
LINC00649-204ENST00000593977 SPTY2D1-AS1A0A0U1RR47 76 aa3.4□□□□□ -1.87
LINC00649-204ENST00000593977 ANKRD63C9JTQ0 380 aa3.4□□□□□ -1.87
LINC00649-204ENST00000593977 G3V3Y1 287 aa3.4□□□□□ -1.87
LINC00649-204ENST00000593977 H7C0C1 242 aa3.4□□□□□ -1.87
LINC00649-204ENST00000593977 SURF4O15260 269 aa3.4□□□□□ -1.87
LINC00649-204ENST00000593977 ERI3O43414 337 aaKnown RBP3.4□□□□□ -1.87
LINC00649-204ENST00000593977 GATCO43716 136 aaKnown RBP3.4□□□□□ -1.87
LINC00649-204ENST00000593977 HPGDSO60760 199 aa3.4□□□□□ -1.87
LINC00649-204ENST00000593977 NUDT3O95989 172 aa3.4□□□□□ -1.87
LINC00649-204ENST00000593977 CELA2AP08217 269 aa3.4□□□□□ -1.87
LINC00649-204ENST00000593977 ZNF250P15622 560 aa3.4□□□□□ -1.87
LINC00649-204ENST00000593977 TNFRSF1BP20333 461 aa3.4□□□□□ -1.87
LINC00649-204ENST00000593977 ELK3P41970 407 aa3.4□□□□□ -1.87
LINC00649-204ENST00000593977 TSFMP43897 325 aaKnown RBP3.4□□□□□ -1.87
LINC00649-204ENST00000593977 PSMD8P48556 350 aa3.4□□□□□ -1.87
LINC00649-204ENST00000593977 ATP4BP51164 291 aa3.4□□□□□ -1.87
LINC00649-204ENST00000593977 HCFC1P51610 2035 aa3.4□□□□□ -1.87
LINC00649-204ENST00000593977 HCCSP53701 268 aa3.4□□□□□ -1.87
LINC00649-204ENST00000593977 FOXG1P55316 489 aaPredicted RBP3.4□□□□□ -1.87
LINC00649-204ENST00000593977 RND3P61587 244 aa3.4□□□□□ -1.87
LINC00649-204ENST00000593977 S100A12P80511 92 aa3.4□□□□□ -1.87
LINC00649-204ENST00000593977 PDIA2Q13087 525 aaKnown RBP3.4□□□□□ -1.87
LINC00649-204ENST00000593977 GUK1Q16774 197 aa3.4□□□□□ -1.87
LINC00649-204ENST00000593977 PDZD11Q5EBL8 140 aa3.4□□□□□ -1.87
LINC00649-204ENST00000593977 VAX1Q5SQQ9 334 aa3.4□□□□□ -1.87
LINC00649-204ENST00000593977 C9orf64Q5T6V5 341 aa3.4□□□□□ -1.87
LINC00649-204ENST00000593977 CPTPQ5TA50 214 aa3.4□□□□□ -1.87
LINC00649-204ENST00000593977 IRAK1BP1Q5VVH5 260 aa3.4□□□□□ -1.87
LINC00649-204ENST00000593977 ZNF57Q68EA5 555 aaPredicted RBP3.4□□□□□ -1.87
LINC00649-204ENST00000593977 FRMPD2BQ6IN97 320 aa3.4□□□□□ -1.87
LINC00649-204ENST00000593977 DNM1P34Q6PK57 102 aa3.4□□□□□ -1.87
LINC00649-204ENST00000593977 PRR22Q8IZ63 422 aa3.4□□□□□ -1.87
LINC00649-204ENST00000593977 KIR2DL5AQ8N109 375 aa3.4□□□□□ -1.87
LINC00649-204ENST00000593977 NANOGP1Q8N7R0 232 aa3.4□□□□□ -1.87
LINC00649-204ENST00000593977 ZNF441Q8N8Z8 693 aa3.4□□□□□ -1.87
LINC00649-204ENST00000593977 ZNRF1Q8ND25 227 aa3.4□□□□□ -1.87
LINC00649-204ENST00000593977 ZNF740Q8NDX6 193 aa3.4□□□□□ -1.87
LINC00649-204ENST00000593977 FDCSPQ8NFU4 85 aa3.4□□□□□ -1.87
LINC00649-204ENST00000593977 OR56B4Q8NH76 319 aa3.4□□□□□ -1.87
LINC00649-204ENST00000593977 KIR2DL5BQ8NHK3 375 aa3.4□□□□□ -1.87
LINC00649-204ENST00000593977 DYNC2LI1Q8TCX1 351 aa3.4□□□□□ -1.87
LINC00649-204ENST00000593977 RNF138Q8WVD3 245 aa3.4□□□□□ -1.87
LINC00649-204ENST00000593977 TCTEX1D2Q8WW35 142 aa3.4□□□□□ -1.87
LINC00649-204ENST00000593977 DDB2Q92466 427 aa3.4□□□□□ -1.87
LINC00649-204ENST00000593977 AP3S1Q92572 193 aa3.4□□□□□ -1.87
LINC00649-204ENST00000593977 NTAN1Q96AB6 310 aa3.4□□□□□ -1.87
LINC00649-204ENST00000593977 POM121L2Q96KW2 1035 aa3.4□□□□□ -1.87
LINC00649-204ENST00000593977 WFIKKN1Q96NZ8 548 aa3.4□□□□□ -1.87
LINC00649-204ENST00000593977 SCGB3A2Q96PL1 93 aa3.4□□□□□ -1.87
LINC00649-204ENST00000593977 ALKBH3Q96Q83 286 aaPredicted RBP3.4□□□□□ -1.87
LINC00649-204ENST00000593977 PRRT1Q99946 306 aa3.4□□□□□ -1.87
LINC00649-204ENST00000593977 MRPL45Q9BRJ2 306 aaKnown RBP3.4□□□□□ -1.87
LINC00649-204ENST00000593977 AGMATQ9BSE5 352 aa3.4□□□□□ -1.87
LINC00649-204ENST00000593977 ZNF385DQ9H6B1 395 aa3.4□□□□□ -1.87
LINC00649-204ENST00000593977 TIGARQ9NQ88 270 aa3.4□□□□□ -1.87
LINC00649-204ENST00000593977 FGFR1OP2Q9NVK5 253 aa3.4□□□□□ -1.87
LINC00649-204ENST00000593977 OCIAD1Q9NX40 245 aa3.4□□□□□ -1.87
LINC00649-204ENST00000593977 NDE1Q9NXR1 346 aa3.4□□□□□ -1.87
LINC00649-204ENST00000593977 B3GNT2Q9NY97 397 aa3.4□□□□□ -1.87
LINC00649-204ENST00000593977 PRODH2Q9UF12 536 aa3.4□□□□□ -1.87
LINC00649-204ENST00000593977 Q9UF83 564 aa3.4□□□□□ -1.87
LINC00649-204ENST00000593977 ZNF107Q9UII5 783 aaPredicted RBP3.4□□□□□ -1.87
LINC00649-204ENST00000593977 ING4Q9UNL4 249 aa3.4□□□□□ -1.87
LINC00649-204ENST00000593977 ZNF337Q9Y3M9 751 aa3.4□□□□□ -1.87
LINC00649-204ENST00000593977 L3MBTL1Q9Y468 752 aa3.4□□□□□ -1.87
LINC00649-204ENST00000593977 CACNG2Q9Y698 323 aa3.4□□□□□ -1.87
LINC00649-204ENST00000593977 ARID1AO14497 2285 aa3.4□□□□□ -1.87
LINC00649-204ENST00000593977 USF3Q68DE3 2245 aa3.39□□□□□ -1.87
LINC00649-204ENST00000593977 UQCRHLA0A096LP55 91 aa3.39□□□□□ -1.87
LINC00649-204ENST00000593977 IGHV5-10-1A0A0J9YXX1 117 aa3.39□□□□□ -1.87
LINC00649-204ENST00000593977 KIR2DS1A0A191URI9 304 aa3.39□□□□□ -1.87
LINC00649-204ENST00000593977 FUOMA2VDF0 154 aa3.39□□□□□ -1.87
LINC00649-204ENST00000593977 ZNF233A6NK53 670 aa3.39□□□□□ -1.87
LINC00649-204ENST00000593977 H3BNH8 94 aa3.39□□□□□ -1.87
LINC00649-204ENST00000593977 SULT2B1O00204 365 aa3.39□□□□□ -1.87
LINC00649-204ENST00000593977 DFFAO00273 331 aa3.39□□□□□ -1.87
LINC00649-204ENST00000593977 TNFRSF13BO14836 293 aaPredicted RBP3.39□□□□□ -1.87
LINC00649-204ENST00000593977 ACOX3O15254 700 aa3.39□□□□□ -1.87
LINC00649-204ENST00000593977 TNFSF12O43508 249 aa3.39□□□□□ -1.87
LINC00649-204ENST00000593977 UGT1A9O60656 530 aa3.39□□□□□ -1.87
LINC00649-204ENST00000593977 SRP72O76094 671 aaKnown RBP3.39□□□□□ -1.87
LINC00649-204ENST00000593977 CTDNEP1O95476 244 aa3.39□□□□□ -1.87
LINC00649-204ENST00000593977 ATP6V1G2O95670 118 aa3.39□□□□□ -1.87
LINC00649-204ENST00000593977 RAB36O95755 333 aa3.39□□□□□ -1.87
LINC00649-204ENST00000593977 TBX6O95947 436 aaPredicted RBP3.39□□□□□ -1.87
LINC00649-204ENST00000593977 BMP15O95972 392 aa3.39□□□□□ -1.87
LINC00649-204ENST00000593977 NGFP01138 241 aa3.39□□□□□ -1.87
LINC00649-204ENST00000593977 GCGP01275 180 aa3.39□□□□□ -1.87
LINC00649-204ENST00000593977 HLA-AP01891 365 aaKnown RBP3.39□□□□□ -1.87
LINC00649-204ENST00000593977 TNNC2P02585 160 aa3.39□□□□□ -1.87
LINC00649-204ENST00000593977 CD74P04233 296 aa3.39□□□□□ -1.87
LINC00649-204ENST00000593977 CALB1P05937 261 aa3.39□□□□□ -1.87
LINC00649-204ENST00000593977 CDK1P06493 297 aa3.39□□□□□ -1.87
LINC00649-204ENST00000593977 UQCRHP07919 91 aa3.39□□□□□ -1.87
LINC00649-204ENST00000593977 HOXC4P09017 264 aaPredicted RBP3.39□□□□□ -1.87
LINC00649-204ENST00000593977 GNAO1P09471 354 aa3.39□□□□□ -1.87
LINC00649-204ENST00000593977 PVRP15151 417 aa3.39□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms