RNA–Protein interactions for RNA: ENST00000593919.5

VRK3-205, Transcript of vaccinia related kinase 3, humanhuman

TSL 1 (best) BASIC

Gene VRK3, Length 1,979 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-205ENST00000593919 LDLRAD4O15165 306 aa11.37□□□□□ -0.59
VRK3-205ENST00000593919 SCGB1D2O95969 90 aa11.37□□□□□ -0.59
VRK3-205ENST00000593919 CD3DP04234 171 aa11.37□□□□□ -0.59
VRK3-205ENST00000593919 HCKP08631 526 aa11.37□□□□□ -0.59
VRK3-205ENST00000593919 AKAIN1P0CW23 69 aa11.37□□□□□ -0.59
VRK3-205ENST00000593919 ZP1P60852 638 aa11.37□□□□□ -0.59
VRK3-205ENST00000593919 PPA1Q15181 289 aa11.37□□□□□ -0.59
VRK3-205ENST00000593919 MOGAT2Q3SYC2 334 aa11.37□□□□□ -0.59
VRK3-205ENST00000593919 SPATA46Q5T0L3 261 aa11.37□□□□□ -0.59
VRK3-205ENST00000593919 ALKBH2Q6NS38 261 aa11.37□□□□□ -0.59
VRK3-205ENST00000593919 C22orf34Q6ZV56 151 aa11.37□□□□□ -0.59
VRK3-205ENST00000593919 RNF144BQ7Z419 303 aa11.37□□□□□ -0.59
VRK3-205ENST00000593919 CDH24Q86UP0 819 aa11.37□□□□□ -0.59
VRK3-205ENST00000593919 FJX1Q86VR8 437 aa11.37□□□□□ -0.59
VRK3-205ENST00000593919 FAM169BQ8N8A8 192 aa11.37□□□□□ -0.59
VRK3-205ENST00000593919 OR56B2PQ8NGI1 322 aa11.37□□□□□ -0.59
VRK3-205ENST00000593919 ZNF431Q8TF32 576 aaPredicted RBP11.37□□□□□ -0.59
VRK3-205ENST00000593919 NPRL2Q8WTW4 380 aa11.37□□□□□ -0.59
VRK3-205ENST00000593919 MUCL1Q96DR8 90 aa11.37□□□□□ -0.59
VRK3-205ENST00000593919 CCDC120Q96HB5 630 aa11.37□□□□□ -0.59
VRK3-205ENST00000593919 GINS4Q9BRT9 223 aa11.37□□□□□ -0.59
VRK3-205ENST00000593919 METTL17Q9H7H0 456 aaPredicted RBP11.37□□□□□ -0.59
VRK3-205ENST00000593919 EIF3KQ9UBQ5 218 aaKnown RBP11.37□□□□□ -0.59
VRK3-205ENST00000593919 ELF5Q9UKW6 265 aaPredicted RBP11.37□□□□□ -0.59
VRK3-205ENST00000593919 MGAT4AQ9UM21 535 aa11.37□□□□□ -0.59
VRK3-205ENST00000593919 ICE1Q9Y2F5 2266 aa11.37□□□□□ -0.59
VRK3-205ENST00000593919 PYCARD-AS1I3L0S3 204 aa11.36□□□□□ -0.59
VRK3-205ENST00000593919 ZNF780AO75290 641 aaPredicted RBP11.36□□□□□ -0.59
VRK3-205ENST00000593919 ZNF35P13682 527 aa11.36□□□□□ -0.59
VRK3-205ENST00000593919 ZNF93P35789 620 aaPredicted RBP11.36□□□□□ -0.59
VRK3-205ENST00000593919 TMEM42Q69YG0 159 aa11.36□□□□□ -0.59
VRK3-205ENST00000593919 GLDNQ6ZMI3 551 aaPredicted RBP11.36□□□□□ -0.59
VRK3-205ENST00000593919 C9orf62Q8N4C0 152 aa11.36□□□□□ -0.59
VRK3-205ENST00000593919 OR5L1Q8NGL2 311 aa11.36□□□□□ -0.59
VRK3-205ENST00000593919 GRPEL2Q8TAA5 225 aa11.36□□□□□ -0.59
VRK3-205ENST00000593919 GPX8Q8TED1 209 aa11.36□□□□□ -0.59
VRK3-205ENST00000593919 SSC4DQ8WTU2 575 aa11.36□□□□□ -0.59
VRK3-205ENST00000593919 FAM46BQ96A09 425 aa11.36□□□□□ -0.59
VRK3-205ENST00000593919 GON7Q9BXV9 100 aa11.36□□□□□ -0.59
VRK3-205ENST00000593919 OPA3Q9H6K4 179 aa11.36□□□□□ -0.59
VRK3-205ENST00000593919 RANBP3Q9H6Z4 567 aaPredicted RBP11.36□□□□□ -0.59
VRK3-205ENST00000593919 GPR173Q9NS66 373 aa11.36□□□□□ -0.59
VRK3-205ENST00000593919 ZNF816-ZNF321PA0A0X1KG74 233 aa11.36□□□□□ -0.59
VRK3-205ENST00000593919 C16orf97H3BN30 126 aa11.36□□□□□ -0.59
VRK3-205ENST00000593919 TSC22D2O75157 780 aa11.36□□□□□ -0.59
VRK3-205ENST00000593919 ALX3O95076 343 aa11.36□□□□□ -0.59
VRK3-205ENST00000593919 LPLP06858 475 aa11.36□□□□□ -0.59
VRK3-205ENST00000593919 ZNF83P51522 516 aa11.36□□□□□ -0.59
VRK3-205ENST00000593919 UCP2P55851 309 aa11.36□□□□□ -0.59
VRK3-205ENST00000593919 ACTBP60709 375 aa11.36□□□□□ -0.59
VRK3-205ENST00000593919 ERVS71-1P61550 626 aa11.36□□□□□ -0.59
VRK3-205ENST00000593919 ACTG1P63261 375 aa11.36□□□□□ -0.59
VRK3-205ENST00000593919 RBMS2Q15434 407 aaKnown RBP11.36□□□□□ -0.59
VRK3-205ENST00000593919 CLVS2Q5SYC1 327 aa11.36□□□□□ -0.59
VRK3-205ENST00000593919 STEAP1BQ6NZ63 245 aa11.36□□□□□ -0.59
VRK3-205ENST00000593919 OR11H4Q8NGC9 324 aa11.36□□□□□ -0.59
VRK3-205ENST00000593919 OR51S1Q8NGJ8 323 aa11.36□□□□□ -0.59
VRK3-205ENST00000593919 SEH1LQ96EE3 360 aa11.36□□□□□ -0.59
VRK3-205ENST00000593919 UQCC2Q9BRT2 126 aa11.36□□□□□ -0.59
VRK3-205ENST00000593919 CHIAQ9BZP6 476 aa11.36□□□□□ -0.59
VRK3-205ENST00000593919 ZNF436Q9C0F3 470 aaPredicted RBP11.36□□□□□ -0.59
VRK3-205ENST00000593919 DLL4Q9NR61 685 aa11.36□□□□□ -0.59
VRK3-205ENST00000593919 ANKHD1Q8IWZ3 2542 aaKnown RBP11.35□□□□□ -0.59
VRK3-205ENST00000593919 ROS1P08922 2347 aa11.35□□□□□ -0.59
VRK3-205ENST00000593919 IGHV2OR16-5A0A0B4J2B6 119 aa11.35□□□□□ -0.59
VRK3-205ENST00000593919 NRASP01111 189 aa11.35□□□□□ -0.59
VRK3-205ENST00000593919 RLN1P04808 185 aa11.35□□□□□ -0.59
VRK3-205ENST00000593919 PRF1P14222 555 aa11.35□□□□□ -0.59
VRK3-205ENST00000593919 CALCRP30988 508 aa11.35□□□□□ -0.59
VRK3-205ENST00000593919 PPP1CBP62140 327 aa11.35□□□□□ -0.59
VRK3-205ENST00000593919 C6orf183Q5T699 404 aa11.35□□□□□ -0.59
VRK3-205ENST00000593919 CRIP3Q6Q6R5 217 aa11.35□□□□□ -0.59
VRK3-205ENST00000593919 OR52B4Q8NGK2 314 aa11.35□□□□□ -0.59
VRK3-205ENST00000593919 PIGTQ969N2 578 aa11.35□□□□□ -0.59
VRK3-205ENST00000593919 OR2J1Q9GZK6 312 aa11.35□□□□□ -0.59
VRK3-205ENST00000593919 GPN1Q9HCN4 374 aaPredicted RBP11.35□□□□□ -0.59
VRK3-205ENST00000593919 CRIM1Q9NZV1 1036 aa11.35□□□□□ -0.59
VRK3-205ENST00000593919 MGAT4CQ9UBM8 478 aa11.35□□□□□ -0.59
VRK3-205ENST00000593919 KCNN3Q9UGI6 736 aa11.35□□□□□ -0.59
VRK3-205ENST00000593919 RAB22AQ9UL26 194 aa11.35□□□□□ -0.59
VRK3-205ENST00000593919 TMEM235A6NFC5 223 aa11.34□□□□□ -0.59
VRK3-205ENST00000593919 M0R1B8 84 aa11.34□□□□□ -0.59
VRK3-205ENST00000593919 SULT1C2O00338 296 aa11.34□□□□□ -0.59
VRK3-205ENST00000593919 CREBL2O60519 120 aaPredicted RBP11.34□□□□□ -0.59
VRK3-205ENST00000593919 VSIG10L2P0DP72 767 aa11.34□□□□□ -0.59
VRK3-205ENST00000593919 RAB6AP20340 208 aa11.34□□□□□ -0.59
VRK3-205ENST00000593919 CHRNB4P30926 498 aa11.34□□□□□ -0.59
VRK3-205ENST00000593919 ADORA2A-AS1P86434 159 aa11.34□□□□□ -0.59
VRK3-205ENST00000593919 NAAAQ02083 359 aa11.34□□□□□ -0.59
VRK3-205ENST00000593919 SSBP1Q04837 148 aaKnown RBP11.34□□□□□ -0.59
VRK3-205ENST00000593919 UNC119Q13432 240 aa11.34□□□□□ -0.59
VRK3-205ENST00000593919 KISS1Q15726 138 aa11.34□□□□□ -0.59
VRK3-205ENST00000593919 ZBTB37Q5TC79 503 aa11.34□□□□□ -0.59
VRK3-205ENST00000593919 AWAT2Q6E213 333 aa11.34□□□□□ -0.59
VRK3-205ENST00000593919 SEZ6L2Q6UXD5 910 aa11.34□□□□□ -0.59
VRK3-205ENST00000593919 FBXW12Q6X9E4 464 aa11.34□□□□□ -0.59
VRK3-205ENST00000593919 NLRC3Q7RTR2 1065 aa11.34□□□□□ -0.59
VRK3-205ENST00000593919 BHLHE23Q8NDY6 225 aa11.34□□□□□ -0.59
VRK3-205ENST00000593919 OR1J1Q8NGS3 322 aa11.34□□□□□ -0.59
VRK3-205ENST00000593919 LILRB4Q8NHJ6 448 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms