RNA–Protein interactions for RNA: ENST00000593564.2

LSM4-202, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM4, Length 656 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-202ENST00000593564 TMEM236Q5W0B7 351 aa19.43■□□□□ 0.7
LSM4-202ENST00000593564 TMEM200BQ69YZ2 307 aa19.43■□□□□ 0.7
LSM4-202ENST00000593564 LIAT1Q6ZQX7 453 aa19.43■□□□□ 0.7
LSM4-202ENST00000593564 C11orf42Q8N5U0 333 aa19.43■□□□□ 0.7
LSM4-202ENST00000593564 OR2T6Q8NHC8 308 aa19.43■□□□□ 0.7
LSM4-202ENST00000593564 ASB17Q8WXJ9 295 aa19.43■□□□□ 0.7
LSM4-202ENST00000593564 C1orf21Q9H246 121 aa19.43■□□□□ 0.7
LSM4-202ENST00000593564 FOXJ3Q9UPW0 622 aa19.43■□□□□ 0.7
LSM4-202ENST00000593564 TMEM14AQ9Y6G1 99 aa19.43■□□□□ 0.7
LSM4-202ENST00000593564 CCDC182A6NF36 153 aa19.42■□□□□ 0.7
LSM4-202ENST00000593564 J3QT63 122 aa19.42■□□□□ 0.7
LSM4-202ENST00000593564 SLC1A7O00341 560 aa19.42■□□□□ 0.7
LSM4-202ENST00000593564 NOS1APO75052 506 aaPredicted RBP19.42■□□□□ 0.7
LSM4-202ENST00000593564 DHRS3O75911 302 aa19.42■□□□□ 0.7
LSM4-202ENST00000593564 NRASP01111 189 aa19.42■□□□□ 0.7
LSM4-202ENST00000593564 OPN1MWP04001 364 aa19.42■□□□□ 0.7
LSM4-202ENST00000593564 MRPL3P09001 348 aaKnown RBP19.42■□□□□ 0.7
LSM4-202ENST00000593564 PGA5P0DJD9 388 aa19.42■□□□□ 0.7
LSM4-202ENST00000593564 OPN1MW2P0DN77 364 aa19.42■□□□□ 0.7
LSM4-202ENST00000593564 OPN1MW3P0DN78 364 aa19.42■□□□□ 0.7
LSM4-202ENST00000593564 PRDX2P32119 198 aa19.42■□□□□ 0.7
LSM4-202ENST00000593564 SNAPC1Q16533 368 aa19.42■□□□□ 0.7
LSM4-202ENST00000593564 LCN1P1Q5VSP4 162 aa19.42■□□□□ 0.7
LSM4-202ENST00000593564 ZNF573Q86YE8 665 aa19.42■□□□□ 0.7
LSM4-202ENST00000593564 KLHDC1Q8N7A1 406 aa19.42■□□□□ 0.7
LSM4-202ENST00000593564 DTX3Q8N9I9 347 aa19.42■□□□□ 0.7
LSM4-202ENST00000593564 ZNF488Q96MN9 340 aa19.42■□□□□ 0.7
LSM4-202ENST00000593564 TVP23BQ9NYZ1 205 aa19.42■□□□□ 0.7
LSM4-202ENST00000593564 USE1Q9NZ43 259 aa19.42■□□□□ 0.7
LSM4-202ENST00000593564 COPS3Q9UNS2 423 aa19.42■□□□□ 0.7
LSM4-202ENST00000593564 hCG_1809904A0A1W2PP81 198 aa19.41■□□□□ 0.7
LSM4-202ENST00000593564 A0A1W2PPE2 198 aa19.41■□□□□ 0.7
LSM4-202ENST00000593564 A0A1W2PR64 198 aa19.41■□□□□ 0.7
LSM4-202ENST00000593564 A0A1W2PRV1 198 aa19.41■□□□□ 0.7
LSM4-202ENST00000593564 SYNGR1O43759 233 aa19.41■□□□□ 0.7
LSM4-202ENST00000593564 PAX6P26367 422 aa19.41■□□□□ 0.7
LSM4-202ENST00000593564 HAAOP46952 286 aa19.41■□□□□ 0.7
LSM4-202ENST00000593564 RIDAP52758 137 aaKnown RBP19.41■□□□□ 0.7
LSM4-202ENST00000593564 MFGE8Q08431 387 aaPredicted RBP19.41■□□□□ 0.7
LSM4-202ENST00000593564 BEAN1Q3B7T3 259 aa19.41■□□□□ 0.7
LSM4-202ENST00000593564 PIFOQ8TCI5 191 aa19.41■□□□□ 0.7
LSM4-202ENST00000593564 PPP1R14AQ96A00 147 aa19.41■□□□□ 0.7
LSM4-202ENST00000593564 THTPAQ9BU02 230 aa19.41■□□□□ 0.7
LSM4-202ENST00000593564 NPFFR1Q9GZQ6 430 aa19.41■□□□□ 0.7
LSM4-202ENST00000593564 POLDIP2Q9Y2S7 368 aa19.41■□□□□ 0.7
LSM4-202ENST00000593564 CHST1O43916 411 aa19.4■□□□□ 0.7
LSM4-202ENST00000593564 TTRP02766 147 aa19.4■□□□□ 0.7
LSM4-202ENST00000593564 TMEM42Q69YG0 159 aa19.4■□□□□ 0.7
LSM4-202ENST00000593564 OR4M1Q8NGD0 313 aa19.4■□□□□ 0.7
LSM4-202ENST00000593564 OR2T27Q8NH04 317 aa19.4■□□□□ 0.7
LSM4-202ENST00000593564 NRIP2Q9BQI9 281 aa19.4■□□□□ 0.7
LSM4-202ENST00000593564 IKZF2Q9UKS7 526 aa19.4■□□□□ 0.7
LSM4-202ENST00000593564 MEGF11A6BM72 1044 aa19.39■□□□□ 0.69
LSM4-202ENST00000593564 G3V4G9 280 aa19.39■□□□□ 0.69
LSM4-202ENST00000593564 SRSF10O75494 262 aaKnown RBP19.39■□□□□ 0.69
LSM4-202ENST00000593564 CCL3L1P16619 93 aa19.39■□□□□ 0.69
LSM4-202ENST00000593564 COX7A1P24310 79 aa19.39■□□□□ 0.69
LSM4-202ENST00000593564 BMXP51813 675 aa19.39■□□□□ 0.69
LSM4-202ENST00000593564 LGALS4P56470 323 aa19.39■□□□□ 0.69
LSM4-202ENST00000593564 ERVFRD-1P60508 538 aa19.39■□□□□ 0.69
LSM4-202ENST00000593564 CLVS2Q5SYC1 327 aa19.39■□□□□ 0.69
LSM4-202ENST00000593564 KPRPQ5T749 579 aaPredicted RBP19.39■□□□□ 0.69
LSM4-202ENST00000593564 CALHM1Q8IU99 346 aa19.39■□□□□ 0.69
LSM4-202ENST00000593564 C11orf44Q8N8P7 122 aa19.39■□□□□ 0.69
LSM4-202ENST00000593564 DNAJC9Q8WXX5 260 aa19.39■□□□□ 0.69
LSM4-202ENST00000593564 CNN2Q99439 309 aaKnown RBP19.39■□□□□ 0.69
LSM4-202ENST00000593564 TTTY10Q9BZA0 68 aa19.39■□□□□ 0.69
LSM4-202ENST00000593564 MOB1AQ9H8S9 216 aa19.39■□□□□ 0.69
LSM4-202ENST00000593564 HES4Q9HCC6 221 aa19.39■□□□□ 0.69
LSM4-202ENST00000593564 DNAJB9Q9UBS3 223 aa19.39■□□□□ 0.69
LSM4-202ENST00000593564 PQLC2LA1A4F0 135 aa19.38■□□□□ 0.69
LSM4-202ENST00000593564 FAM90A8PA6NJQ4 464 aa19.38■□□□□ 0.69
LSM4-202ENST00000593564 VGLL3A8MV65 326 aa19.38■□□□□ 0.69
LSM4-202ENST00000593564 DLGAP1O14490 977 aa19.38■□□□□ 0.69
LSM4-202ENST00000593564 NXPH2O95156 264 aa19.38■□□□□ 0.69
LSM4-202ENST00000593564 CEBPDP49716 269 aaPredicted RBP19.38■□□□□ 0.69
LSM4-202ENST00000593564 CRISP1P54107 249 aa19.38■□□□□ 0.69
LSM4-202ENST00000593564 ZNF273Q14593 569 aa19.38■□□□□ 0.69
LSM4-202ENST00000593564 SAMD5Q5TGI4 173 aa19.38■□□□□ 0.69
LSM4-202ENST00000593564 CCDC197Q8NCU1 140 aa19.38■□□□□ 0.69
LSM4-202ENST00000593564 GPR173Q9NS66 373 aa19.38■□□□□ 0.69
LSM4-202ENST00000593564 LOC110117498-PIK3R3F6TDL0 507 aa19.37■□□□□ 0.69
LSM4-202ENST00000593564 FKBP6O75344 327 aa19.37■□□□□ 0.69
LSM4-202ENST00000593564 TK1P04183 234 aa19.37■□□□□ 0.69
LSM4-202ENST00000593564 MPZP25189 248 aa19.37■□□□□ 0.69
LSM4-202ENST00000593564 CBX1P83916 185 aa19.37■□□□□ 0.69
LSM4-202ENST00000593564 HIST2H2BDQ6DRA6 164 aa19.37■□□□□ 0.69
LSM4-202ENST00000593564 PAPOLBQ9NRJ5 636 aaKnown RBP19.37■□□□□ 0.69
LSM4-202ENST00000593564 V9GYS6 101 aa19.37■□□□□ 0.69
LSM4-202ENST00000593564 PRKYO43930 277 aa19.36■□□□□ 0.69
LSM4-202ENST00000593564 FAM107AO95990 144 aa19.36■□□□□ 0.69
LSM4-202ENST00000593564 VSIG10L2P0DP72 767 aa19.36■□□□□ 0.69
LSM4-202ENST00000593564 DLX6P56179 175 aa19.36■□□□□ 0.69
LSM4-202ENST00000593564 BCL2L15Q5TBC7 163 aa19.36■□□□□ 0.69
LSM4-202ENST00000593564 ZNF322Q6U7Q0 402 aaPredicted RBP19.36■□□□□ 0.69
LSM4-202ENST00000593564 ZNF782Q6ZMW2 699 aaPredicted RBP19.36■□□□□ 0.69
LSM4-202ENST00000593564 Q6ZSR3 168 aa19.36■□□□□ 0.69
LSM4-202ENST00000593564 ASRGL1Q7L266 308 aa19.36■□□□□ 0.69
LSM4-202ENST00000593564 LHFPL4Q7Z7J7 247 aa19.36■□□□□ 0.69
LSM4-202ENST00000593564 SPATA24Q86W54 205 aa19.36■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms