RNA–Protein interactions for RNA: ENST00000593168.5

VMP1-217, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 558 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-217ENST00000593168 RNF170Q96K19 258 aa11.49□□□□□ -0.57
VMP1-217ENST00000593168 S100A13Q99584 98 aa11.49□□□□□ -0.57
VMP1-217ENST00000593168 SDHCQ99643 169 aaPredicted RBP11.49□□□□□ -0.57
VMP1-217ENST00000593168 MICU1Q9BPX6 476 aa11.49□□□□□ -0.57
VMP1-217ENST00000593168 ESRP2Q9H6T0 727 aaKnown RBP11.49□□□□□ -0.57
VMP1-217ENST00000593168 DIABLOQ9NR28 239 aa11.49□□□□□ -0.57
VMP1-217ENST00000593168 TMEM100Q9NV29 134 aa11.49□□□□□ -0.57
VMP1-217ENST00000593168 ING4Q9UNL4 249 aa11.49□□□□□ -0.57
VMP1-217ENST00000593168 PRRC2AP48634 2157 aaKnown RBP11.49□□□□□ -0.57
VMP1-217ENST00000593168 IGLV3-9A0A075B6K5 115 aa11.48□□□□□ -0.57
VMP1-217ENST00000593168 A0A0A6YYH2 397 aa11.48□□□□□ -0.57
VMP1-217ENST00000593168 A0A1B0GWJ7 208 aa11.48□□□□□ -0.57
VMP1-217ENST00000593168 METTL21EPA6NDL7 271 aa11.48□□□□□ -0.57
VMP1-217ENST00000593168 A6NJ64 397 aa11.48□□□□□ -0.57
VMP1-217ENST00000593168 ZNF732B4DXR9 585 aa11.48□□□□□ -0.57
VMP1-217ENST00000593168 ABCD4O14678 606 aa11.48□□□□□ -0.57
VMP1-217ENST00000593168 ZNF780AO75290 641 aaPredicted RBP11.48□□□□□ -0.57
VMP1-217ENST00000593168 CTAG2O75638 210 aa11.48□□□□□ -0.57
VMP1-217ENST00000593168 UPK1BO75841 260 aa11.48□□□□□ -0.57
VMP1-217ENST00000593168 TMEM225BP0DP42 221 aa11.48□□□□□ -0.57
VMP1-217ENST00000593168 CA6P23280 308 aa11.48□□□□□ -0.57
VMP1-217ENST00000593168 EFNB2P52799 333 aa11.48□□□□□ -0.57
VMP1-217ENST00000593168 BSPH1Q075Z2 132 aa11.48□□□□□ -0.57
VMP1-217ENST00000593168 PDZK1IP1Q13113 114 aa11.48□□□□□ -0.57
VMP1-217ENST00000593168 UNC119Q13432 240 aa11.48□□□□□ -0.57
VMP1-217ENST00000593168 GPR176Q14439 515 aa11.48□□□□□ -0.57
VMP1-217ENST00000593168 ZNF181Q2M3W8 571 aa11.48□□□□□ -0.57
VMP1-217ENST00000593168 FAM76BQ5HYJ3 339 aa11.48□□□□□ -0.57
VMP1-217ENST00000593168 TMEM255AQ5JRV8 349 aa11.48□□□□□ -0.57
VMP1-217ENST00000593168 NCMAPQ5T1S8 102 aa11.48□□□□□ -0.57
VMP1-217ENST00000593168 OR10K2Q6IF99 312 aa11.48□□□□□ -0.57
VMP1-217ENST00000593168 C1QL2Q7Z5L3 287 aa11.48□□□□□ -0.57
VMP1-217ENST00000593168 TGIF2LYQ8IUE0 185 aa11.48□□□□□ -0.57
VMP1-217ENST00000593168 OR5D18Q8NGL1 313 aa11.48□□□□□ -0.57
VMP1-217ENST00000593168 C15orf40Q8WUR7 153 aa11.48□□□□□ -0.57
VMP1-217ENST00000593168 RADILQ96JH8 1075 aa11.48□□□□□ -0.57
VMP1-217ENST00000593168 FGF23Q9GZV9 251 aaPredicted RBP11.48□□□□□ -0.57
VMP1-217ENST00000593168 CST11Q9H112 138 aa11.48□□□□□ -0.57
VMP1-217ENST00000593168 CXXC4Q9H2H0 198 aa11.48□□□□□ -0.57
VMP1-217ENST00000593168 KCNK15Q9H427 330 aa11.48□□□□□ -0.57
VMP1-217ENST00000593168 A0A0G2JMP0 313 aa11.47□□□□□ -0.57
VMP1-217ENST00000593168 A0A0X1KG70 313 aa11.47□□□□□ -0.57
VMP1-217ENST00000593168 FAM221AA4D161 298 aa11.47□□□□□ -0.57
VMP1-217ENST00000593168 TUBAL3A6NHL2 446 aa11.47□□□□□ -0.57
VMP1-217ENST00000593168 CTDSPLO15194 276 aa11.47□□□□□ -0.57
VMP1-217ENST00000593168 XRCC3O43542 346 aa11.47□□□□□ -0.57
VMP1-217ENST00000593168 TIMM8AO60220 97 aaPredicted RBP11.47□□□□□ -0.57
VMP1-217ENST00000593168 SCGNO76038 276 aa11.47□□□□□ -0.57
VMP1-217ENST00000593168 CHRM2P08172 466 aa11.47□□□□□ -0.57
VMP1-217ENST00000593168 SELENOVP59797 346 aa11.47□□□□□ -0.57
VMP1-217ENST00000593168 MSMPQ1L6U9 139 aa11.47□□□□□ -0.57
VMP1-217ENST00000593168 PYDC2Q56P42 97 aa11.47□□□□□ -0.57
VMP1-217ENST00000593168 RAB12Q6IQ22 244 aa11.47□□□□□ -0.57
VMP1-217ENST00000593168 SLC22A25Q6T423 547 aa11.47□□□□□ -0.57
VMP1-217ENST00000593168 ZNF573Q86YE8 665 aa11.47□□□□□ -0.57
VMP1-217ENST00000593168 SAXO1Q8IYX7 474 aa11.47□□□□□ -0.57
VMP1-217ENST00000593168 SPERTQ8NA61 448 aa11.47□□□□□ -0.57
VMP1-217ENST00000593168 OR4M2Q8NGB6 313 aa11.47□□□□□ -0.57
VMP1-217ENST00000593168 OR13G1Q8NGZ3 307 aa11.47□□□□□ -0.57
VMP1-217ENST00000593168 OR8S1Q8NH09 359 aa11.47□□□□□ -0.57
VMP1-217ENST00000593168 LINC01560Q8TB33 94 aa11.47□□□□□ -0.57
VMP1-217ENST00000593168 PHF21AQ96BD5 680 aa11.47□□□□□ -0.57
VMP1-217ENST00000593168 ABHD1Q96SE0 405 aa11.47□□□□□ -0.57
VMP1-217ENST00000593168 FOXC2Q99958 501 aa11.47□□□□□ -0.57
VMP1-217ENST00000593168 NUDT16L1Q9BRJ7 211 aaKnown RBP11.47□□□□□ -0.57
VMP1-217ENST00000593168 RTL8AQ9BWD3 113 aa11.47□□□□□ -0.57
VMP1-217ENST00000593168 METTL9Q9H1A3 318 aa11.47□□□□□ -0.57
VMP1-217ENST00000593168 ATG5Q9H1Y0 275 aa11.47□□□□□ -0.57
VMP1-217ENST00000593168 GSX1Q9H4S2 264 aaPredicted RBP11.47□□□□□ -0.57
VMP1-217ENST00000593168 ZNF442Q9H7R0 627 aa11.47□□□□□ -0.57
VMP1-217ENST00000593168 PCDHB16Q9NRJ7 776 aa11.47□□□□□ -0.57
VMP1-217ENST00000593168 IL36GQ9NZH8 169 aa11.47□□□□□ -0.57
VMP1-217ENST00000593168 FZR1Q9UM11 496 aa11.47□□□□□ -0.57
VMP1-217ENST00000593168 ACANP16112 2415 aa11.46□□□□□ -0.57
VMP1-217ENST00000593168 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP11.46□□□□□ -0.57
VMP1-217ENST00000593168 TMEM210A6NLX4 147 aa11.46□□□□□ -0.57
VMP1-217ENST00000593168 VSTM5A8MXK1 200 aa11.46□□□□□ -0.57
VMP1-217ENST00000593168 CDC14BO60729 498 aa11.46□□□□□ -0.57
VMP1-217ENST00000593168 HLA-DQB1P01920 261 aa11.46□□□□□ -0.57
VMP1-217ENST00000593168 CDK2P24941 298 aa11.46□□□□□ -0.57
VMP1-217ENST00000593168 GPM6AP51674 278 aa11.46□□□□□ -0.57
VMP1-217ENST00000593168 KLF3P57682 345 aaPredicted RBP11.46□□□□□ -0.57
VMP1-217ENST00000593168 IFITM3Q01628 133 aa11.46□□□□□ -0.57
VMP1-217ENST00000593168 OR8G1Q15617 311 aa11.46□□□□□ -0.57
VMP1-217ENST00000593168 SLC22A6Q4U2R8 563 aa11.46□□□□□ -0.57
VMP1-217ENST00000593168 BEX5Q5H9J7 111 aa11.46□□□□□ -0.57
VMP1-217ENST00000593168 TMEM69Q5SWH9 247 aa11.46□□□□□ -0.57
VMP1-217ENST00000593168 BIVMQ86UB2 503 aa11.46□□□□□ -0.57
VMP1-217ENST00000593168 CALHM1Q8IU99 346 aa11.46□□□□□ -0.57
VMP1-217ENST00000593168 Q8N402 240 aa11.46□□□□□ -0.57
VMP1-217ENST00000593168 DTX3Q8N9I9 347 aa11.46□□□□□ -0.57
VMP1-217ENST00000593168 TMEM104Q8NE00 496 aa11.46□□□□□ -0.57
VMP1-217ENST00000593168 Q8NFD4 153 aa11.46□□□□□ -0.57
VMP1-217ENST00000593168 FAM46BQ96A09 425 aa11.46□□□□□ -0.57
VMP1-217ENST00000593168 MRPL24Q96A35 216 aaKnown RBP11.46□□□□□ -0.57
VMP1-217ENST00000593168 URM1Q9BTM9 101 aaKnown RBP11.46□□□□□ -0.57
VMP1-217ENST00000593168 ADAT1Q9BUB4 502 aaKnown RBP11.46□□□□□ -0.57
VMP1-217ENST00000593168 PKIBQ9C010 78 aa11.46□□□□□ -0.57
VMP1-217ENST00000593168 LPAR5Q9H1C0 372 aa11.46□□□□□ -0.57
VMP1-217ENST00000593168 OR51I2Q9H344 312 aa11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 81 ms