RNA–Protein interactions for RNA: ENST00000592333.1

CCDC43-205, Transcript of coiled-coil domain containing 43, humanhuman

TSL 2

Gene CCDC43, Length 692 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-205ENST00000592333 RANBP3Q9H6Z4 567 aaPredicted RBP15.39■□□□□ 0.05
CCDC43-205ENST00000592333 A0A0G2JK05 382 aa15.38■□□□□ 0.05
CCDC43-205ENST00000592333 J3QT63 122 aa15.38■□□□□ 0.05
CCDC43-205ENST00000592333 GYG2O15488 501 aa15.38■□□□□ 0.05
CCDC43-205ENST00000592333 EGR3Q06889 387 aa15.38■□□□□ 0.05
CCDC43-205ENST00000592333 CLVS2Q5SYC1 327 aa15.38■□□□□ 0.05
CCDC43-205ENST00000592333 NXNL2Q5VZ03 156 aa15.38■□□□□ 0.05
CCDC43-205ENST00000592333 SLC35E4Q6ICL7 350 aa15.38■□□□□ 0.05
CCDC43-205ENST00000592333 MEPCEQ7L2J0 689 aaKnown RBP15.38■□□□□ 0.05
CCDC43-205ENST00000592333 SPATA24Q86W54 205 aa15.38■□□□□ 0.05
CCDC43-205ENST00000592333 SSX3Q99909 188 aa15.38■□□□□ 0.05
CCDC43-205ENST00000592333 CDCA4Q9BXL8 241 aa15.38■□□□□ 0.05
CCDC43-205ENST00000592333 H2AFY2Q9P0M6 372 aaPredicted RBP15.38■□□□□ 0.05
CCDC43-205ENST00000592333 V9GYS6 101 aa15.38■□□□□ 0.05
CCDC43-205ENST00000592333 RFPL4AA6NLU0 287 aa15.37■□□□□ 0.05
CCDC43-205ENST00000592333 RFPL4AL1F8VTS6 287 aa15.37■□□□□ 0.05
CCDC43-205ENST00000592333 SRSF10O75494 262 aaKnown RBP15.37■□□□□ 0.05
CCDC43-205ENST00000592333 TTRP02766 147 aa15.37■□□□□ 0.05
CCDC43-205ENST00000592333 FAHP16930 419 aa15.37■□□□□ 0.05
CCDC43-205ENST00000592333 MPZP25189 248 aa15.37■□□□□ 0.05
CCDC43-205ENST00000592333 GABRA5P31644 462 aa15.37■□□□□ 0.05
CCDC43-205ENST00000592333 PRDX2P32119 198 aa15.37■□□□□ 0.05
CCDC43-205ENST00000592333 RPL31P62899 125 aaKnown RBP15.37■□□□□ 0.05
CCDC43-205ENST00000592333 EFNB1P98172 346 aa15.37■□□□□ 0.05
CCDC43-205ENST00000592333 LRRC75BQ2VPJ9 315 aa15.37■□□□□ 0.05
CCDC43-205ENST00000592333 ZNF322Q6U7Q0 402 aaPredicted RBP15.37■□□□□ 0.05
CCDC43-205ENST00000592333 ELMOD2Q8IZ81 293 aa15.37■□□□□ 0.05
CCDC43-205ENST00000592333 FAM185AQ8N0U4 392 aa15.37■□□□□ 0.05
CCDC43-205ENST00000592333 PPA2Q9H2U2 334 aa15.37■□□□□ 0.05
CCDC43-205ENST00000592333 HES4Q9HCC6 221 aa15.37■□□□□ 0.05
CCDC43-205ENST00000592333 USE1Q9NZ43 259 aa15.37■□□□□ 0.05
CCDC43-205ENST00000592333 ENOPH1Q9UHY7 261 aa15.37■□□□□ 0.05
CCDC43-205ENST00000592333 IKZF2Q9UKS7 526 aa15.37■□□□□ 0.05
CCDC43-205ENST00000592333 POMPQ9Y244 141 aa15.37■□□□□ 0.05
CCDC43-205ENST00000592333 SNX5Q9Y5X3 404 aa15.37■□□□□ 0.05
CCDC43-205ENST00000592333 R4GMQ9 66 aa15.37■□□□□ 0.05
CCDC43-205ENST00000592333 A0A1W2PRD5 423 aa15.36■□□□□ 0.05
CCDC43-205ENST00000592333 A0A1W2PRF3 423 aa15.36■□□□□ 0.05
CCDC43-205ENST00000592333 A0A1W2PRM7 423 aa15.36■□□□□ 0.05
CCDC43-205ENST00000592333 LOC110117498-PIK3R3F6TDL0 507 aa15.36■□□□□ 0.05
CCDC43-205ENST00000592333 H3BUX3 64 aa15.36■□□□□ 0.05
CCDC43-205ENST00000592333 PSMD9O00233 223 aa15.36■□□□□ 0.05
CCDC43-205ENST00000592333 HAAOP46952 286 aa15.36■□□□□ 0.05
CCDC43-205ENST00000592333 CAPZA1P52907 286 aa15.36■□□□□ 0.05
CCDC43-205ENST00000592333 HERPUD1Q15011 391 aa15.36■□□□□ 0.05
CCDC43-205ENST00000592333 Q6ZTK2 550 aa15.36■□□□□ 0.05
CCDC43-205ENST00000592333 PNKDQ8N490 385 aa15.36■□□□□ 0.05
CCDC43-205ENST00000592333 C11orf42Q8N5U0 333 aa15.36■□□□□ 0.05
CCDC43-205ENST00000592333 CD177Q8N6Q3 437 aa15.36■□□□□ 0.05
CCDC43-205ENST00000592333 CCDC54Q8NEL0 328 aa15.36■□□□□ 0.05
CCDC43-205ENST00000592333 AJUBAQ96IF1 538 aa15.36■□□□□ 0.05
CCDC43-205ENST00000592333 NRIP2Q9BQI9 281 aa15.36■□□□□ 0.05
CCDC43-205ENST00000592333 PKIBQ9C010 78 aa15.36■□□□□ 0.05
CCDC43-205ENST00000592333 C19orf12Q9NSK7 152 aa15.36■□□□□ 0.05
CCDC43-205ENST00000592333 CLN6Q9NWW5 311 aa15.36■□□□□ 0.05
CCDC43-205ENST00000592333 COPS3Q9UNS2 423 aa15.36■□□□□ 0.05
CCDC43-205ENST00000592333 PQLC2LA1A4F0 135 aa15.35■□□□□ 0.05
CCDC43-205ENST00000592333 VGLL3A8MV65 326 aa15.35■□□□□ 0.05
CCDC43-205ENST00000592333 PRR32B1ATL7 298 aa15.35■□□□□ 0.05
CCDC43-205ENST00000592333 ANGPTL7O43827 346 aa15.35■□□□□ 0.05
CCDC43-205ENST00000592333 RBP4P02753 201 aa15.35■□□□□ 0.05
CCDC43-205ENST00000592333 TFF1P04155 84 aa15.35■□□□□ 0.05
CCDC43-205ENST00000592333 MRPL3P09001 348 aaKnown RBP15.35■□□□□ 0.05
CCDC43-205ENST00000592333 DAPP51397 102 aa15.35■□□□□ 0.05
CCDC43-205ENST00000592333 DLX1P56177 255 aa15.35■□□□□ 0.05
CCDC43-205ENST00000592333 ERVFRD-1P60508 538 aa15.35■□□□□ 0.05
CCDC43-205ENST00000592333 CXCR4P61073 352 aa15.35■□□□□ 0.05
CCDC43-205ENST00000592333 BCL2L15Q5TBC7 163 aa15.35■□□□□ 0.05
CCDC43-205ENST00000592333 AADACL4Q5VUY2 407 aa15.35■□□□□ 0.05
CCDC43-205ENST00000592333 TMEM200BQ69YZ2 307 aa15.35■□□□□ 0.05
CCDC43-205ENST00000592333 CRIP3Q6Q6R5 217 aa15.35■□□□□ 0.05
CCDC43-205ENST00000592333 OR4C13Q8NGP0 309 aa15.35■□□□□ 0.05
CCDC43-205ENST00000592333 UTP4Q969X6 686 aaKnown RBP15.35■□□□□ 0.05
CCDC43-205ENST00000592333 ELL3Q9HB65 397 aaPredicted RBP15.35■□□□□ 0.05
CCDC43-205ENST00000592333 PRKYO43930 277 aa15.34■□□□□ 0.05
CCDC43-205ENST00000592333 DNAJC8O75937 253 aaPredicted RBP15.34■□□□□ 0.05
CCDC43-205ENST00000592333 NXPH2O95156 264 aa15.34■□□□□ 0.05
CCDC43-205ENST00000592333 CSF1P09603 554 aa15.34■□□□□ 0.05
CCDC43-205ENST00000592333 CCL1P22362 96 aa15.34■□□□□ 0.05
CCDC43-205ENST00000592333 EFNB2P52799 333 aa15.34■□□□□ 0.05
CCDC43-205ENST00000592333 LGALS4P56470 323 aa15.34■□□□□ 0.05
CCDC43-205ENST00000592333 ERVK11-1P61568 191 aa15.34■□□□□ 0.05
CCDC43-205ENST00000592333 PRB3Q04118 309 aaPredicted RBP15.34■□□□□ 0.05
CCDC43-205ENST00000592333 IL24Q13007 206 aa15.34■□□□□ 0.05
CCDC43-205ENST00000592333 SLX4IPQ5VYV7 408 aa15.34■□□□□ 0.05
CCDC43-205ENST00000592333 GID4Q8IVV7 300 aa15.34■□□□□ 0.05
CCDC43-205ENST00000592333 SLC35F2Q8IXU6 374 aa15.34■□□□□ 0.05
CCDC43-205ENST00000592333 MKXQ8IYA7 352 aa15.34■□□□□ 0.05
CCDC43-205ENST00000592333 OR14K1Q8NGZ2 314 aa15.34■□□□□ 0.05
CCDC43-205ENST00000592333 OR2T6Q8NHC8 308 aa15.34■□□□□ 0.05
CCDC43-205ENST00000592333 TMEM163Q8TC26 289 aa15.34■□□□□ 0.05
CCDC43-205ENST00000592333 SEBOXQ9HB31 216 aaPredicted RBP15.34■□□□□ 0.05
CCDC43-205ENST00000592333 ADGRL4Q9HBW9 690 aa15.34■□□□□ 0.05
CCDC43-205ENST00000592333 OR52A1Q9UKL2 312 aa15.34■□□□□ 0.05
CCDC43-205ENST00000592333 CMYA5Q8N3K9 4069 aa15.34■□□□□ 0.05
CCDC43-205ENST00000592333 A0A1B0GTI1 187 aa15.33■□□□□ 0.04
CCDC43-205ENST00000592333 FAM90A8PA6NJQ4 464 aa15.33■□□□□ 0.04
CCDC43-205ENST00000592333 ZNF670-ZNF695F2Z2N8 137 aa15.33■□□□□ 0.04
CCDC43-205ENST00000592333 TK1P04183 234 aa15.33■□□□□ 0.04
CCDC43-205ENST00000592333 MFGE8Q08431 387 aaPredicted RBP15.33■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms