RNA–Protein interactions for RNA: ENST00000590696.1

DDX39A-215, Transcript of DExD-box helicase 39A, humanhuman

TSL 4

Gene DDX39A, Length 563 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-215ENST00000590696 CCDC197Q8NCU1 140 aa17.7■□□□□ 0.42
DDX39A-215ENST00000590696 OR5K1Q8NHB7 308 aa17.7■□□□□ 0.42
DDX39A-215ENST00000590696 ASB17Q8WXJ9 295 aa17.7■□□□□ 0.42
DDX39A-215ENST00000590696 HEXA-AS1Q9H8Q6 139 aa17.7■□□□□ 0.42
DDX39A-215ENST00000590696 NUFIP1Q9UHK0 495 aaKnown RBP17.7■□□□□ 0.42
DDX39A-215ENST00000590696 TMEM14AQ9Y6G1 99 aa17.7■□□□□ 0.42
DDX39A-215ENST00000590696 A0A1W2PPH5 198 aa17.69■□□□□ 0.42
DDX39A-215ENST00000590696 SLC1A7O00341 560 aa17.69■□□□□ 0.42
DDX39A-215ENST00000590696 SYNGR1O43759 233 aa17.69■□□□□ 0.42
DDX39A-215ENST00000590696 DHRS3O75911 302 aa17.69■□□□□ 0.42
DDX39A-215ENST00000590696 HOXB6P17509 224 aaKnown RBP17.69■□□□□ 0.42
DDX39A-215ENST00000590696 PRDX2P32119 198 aa17.69■□□□□ 0.42
DDX39A-215ENST00000590696 HAAOP46952 286 aa17.69■□□□□ 0.42
DDX39A-215ENST00000590696 CEBPDP49716 269 aaPredicted RBP17.69■□□□□ 0.42
DDX39A-215ENST00000590696 EFNB2P52799 333 aa17.69■□□□□ 0.42
DDX39A-215ENST00000590696 RPL31P62899 125 aaKnown RBP17.69■□□□□ 0.42
DDX39A-215ENST00000590696 CBX1P83916 185 aa17.69■□□□□ 0.42
DDX39A-215ENST00000590696 MFGE8Q08431 387 aaPredicted RBP17.69■□□□□ 0.42
DDX39A-215ENST00000590696 TMEM200BQ69YZ2 307 aa17.69■□□□□ 0.42
DDX39A-215ENST00000590696 HIST2H2BDQ6DRA6 164 aa17.69■□□□□ 0.42
DDX39A-215ENST00000590696 CRIP3Q6Q6R5 217 aa17.69■□□□□ 0.42
DDX39A-215ENST00000590696 ZNF561Q8N587 486 aa17.69■□□□□ 0.42
DDX39A-215ENST00000590696 OR4M1Q8NGD0 313 aa17.69■□□□□ 0.42
DDX39A-215ENST00000590696 OR4C13Q8NGP0 309 aa17.69■□□□□ 0.42
DDX39A-215ENST00000590696 DNAJB9Q9UBS3 223 aa17.69■□□□□ 0.42
DDX39A-215ENST00000590696 IKZF2Q9UKS7 526 aa17.69■□□□□ 0.42
DDX39A-215ENST00000590696 FOXJ3Q9UPW0 622 aa17.69■□□□□ 0.42
DDX39A-215ENST00000590696 TTRP02766 147 aa17.68■□□□□ 0.42
DDX39A-215ENST00000590696 PGA5P0DJD9 388 aa17.68■□□□□ 0.42
DDX39A-215ENST00000590696 CRISP1P54107 249 aa17.68■□□□□ 0.42
DDX39A-215ENST00000590696 ERVFRD-1P60508 538 aa17.68■□□□□ 0.42
DDX39A-215ENST00000590696 AANATQ16613 207 aa17.68■□□□□ 0.42
DDX39A-215ENST00000590696 SPATA24Q86W54 205 aa17.68■□□□□ 0.42
DDX39A-215ENST00000590696 ZNF573Q86YE8 665 aa17.68■□□□□ 0.42
DDX39A-215ENST00000590696 C11orf42Q8N5U0 333 aa17.68■□□□□ 0.42
DDX39A-215ENST00000590696 OR2T27Q8NH04 317 aa17.68■□□□□ 0.42
DDX39A-215ENST00000590696 RAB18Q9NP72 206 aa17.68■□□□□ 0.42
DDX39A-215ENST00000590696 GTF2A1LQ9UNN4 478 aa17.68■□□□□ 0.42
DDX39A-215ENST00000590696 J3QT63 122 aa17.67■□□□□ 0.42
DDX39A-215ENST00000590696 FKBP6O75344 327 aa17.67■□□□□ 0.42
DDX39A-215ENST00000590696 FAM107AO95990 144 aa17.67■□□□□ 0.42
DDX39A-215ENST00000590696 CCL3L1P16619 93 aa17.67■□□□□ 0.42
DDX39A-215ENST00000590696 BMXP51813 675 aa17.67■□□□□ 0.42
DDX39A-215ENST00000590696 CLVS2Q5SYC1 327 aa17.67■□□□□ 0.42
DDX39A-215ENST00000590696 C11orf88Q6PI97 169 aa17.67■□□□□ 0.42
DDX39A-215ENST00000590696 BATF2Q8N1L9 274 aa17.67■□□□□ 0.42
DDX39A-215ENST00000590696 C11orf44Q8N8P7 122 aa17.67■□□□□ 0.42
DDX39A-215ENST00000590696 OR2T6Q8NHC8 308 aa17.67■□□□□ 0.42
DDX39A-215ENST00000590696 APOL4Q9BPW4 351 aa17.67■□□□□ 0.42
DDX39A-215ENST00000590696 PAPOLBQ9NRJ5 636 aaKnown RBP17.67■□□□□ 0.42
DDX39A-215ENST00000590696 GPR173Q9NS66 373 aa17.67■□□□□ 0.42
DDX39A-215ENST00000590696 LOC110117498-PIK3R3F6TDL0 507 aa17.66■□□□□ 0.42
DDX39A-215ENST00000590696 NOS1APO75052 506 aaPredicted RBP17.66■□□□□ 0.42
DDX39A-215ENST00000590696 SRSF10O75494 262 aaKnown RBP17.66■□□□□ 0.42
DDX39A-215ENST00000590696 NXPH2O95156 264 aa17.66■□□□□ 0.42
DDX39A-215ENST00000590696 COX7A1P24310 79 aa17.66■□□□□ 0.42
DDX39A-215ENST00000590696 LGALS4P56470 323 aa17.66■□□□□ 0.42
DDX39A-215ENST00000590696 ESRRGP62508 458 aa17.66■□□□□ 0.42
DDX39A-215ENST00000590696 PTGES3Q15185 160 aaKnown RBP17.66■□□□□ 0.42
DDX39A-215ENST00000590696 KLHDC1Q8N7A1 406 aa17.66■□□□□ 0.42
DDX39A-215ENST00000590696 CNN2Q99439 309 aaKnown RBP17.66■□□□□ 0.42
DDX39A-215ENST00000590696 RANBP3Q9H6Z4 567 aaPredicted RBP17.66■□□□□ 0.42
DDX39A-215ENST00000590696 USE1Q9NZ43 259 aa17.66■□□□□ 0.42
DDX39A-215ENST00000590696 OR14J1Q9UGF5 321 aa17.66■□□□□ 0.42
DDX39A-215ENST00000590696 POLDIP2Q9Y2S7 368 aa17.66■□□□□ 0.42
DDX39A-215ENST00000590696 hCG_1809904A0A1W2PP81 198 aa17.65■□□□□ 0.42
DDX39A-215ENST00000590696 A0A1W2PPE2 198 aa17.65■□□□□ 0.42
DDX39A-215ENST00000590696 A0A1W2PR64 198 aa17.65■□□□□ 0.42
DDX39A-215ENST00000590696 A0A1W2PRV1 198 aa17.65■□□□□ 0.42
DDX39A-215ENST00000590696 PQLC2LA1A4F0 135 aa17.65■□□□□ 0.42
DDX39A-215ENST00000590696 G3V4G9 280 aa17.65■□□□□ 0.42
DDX39A-215ENST00000590696 DLGAP1O14490 977 aa17.65■□□□□ 0.42
DDX39A-215ENST00000590696 MAGEB4O15481 346 aaPredicted RBP17.65■□□□□ 0.42
DDX39A-215ENST00000590696 PRKYO43930 277 aa17.65■□□□□ 0.42
DDX39A-215ENST00000590696 CXCR4P61073 352 aa17.65■□□□□ 0.42
DDX39A-215ENST00000590696 FLOT2Q14254 428 aa17.65■□□□□ 0.42
DDX39A-215ENST00000590696 ZNF273Q14593 569 aa17.65■□□□□ 0.42
DDX39A-215ENST00000590696 TMEM42Q69YG0 159 aa17.65■□□□□ 0.42
DDX39A-215ENST00000590696 ZNF322Q6U7Q0 402 aaPredicted RBP17.65■□□□□ 0.42
DDX39A-215ENST00000590696 ASRGL1Q7L266 308 aa17.65■□□□□ 0.42
DDX39A-215ENST00000590696 BCDIN3DQ7Z5W3 292 aaKnown RBP17.65■□□□□ 0.42
DDX39A-215ENST00000590696 PIFOQ8TCI5 191 aa17.65■□□□□ 0.42
DDX39A-215ENST00000590696 DNAJC9Q8WXX5 260 aa17.65■□□□□ 0.42
DDX39A-215ENST00000590696 CFHR4Q92496 578 aa17.65■□□□□ 0.42
DDX39A-215ENST00000590696 NRIP2Q9BQI9 281 aa17.65■□□□□ 0.42
DDX39A-215ENST00000590696 V9GYS6 101 aa17.65■□□□□ 0.42
DDX39A-215ENST00000590696 MEGF11A6BM72 1044 aa17.64■□□□□ 0.41
DDX39A-215ENST00000590696 A6NIN4 97 aa17.64■□□□□ 0.41
DDX39A-215ENST00000590696 CHST1O43916 411 aa17.64■□□□□ 0.41
DDX39A-215ENST00000590696 TK1P04183 234 aa17.64■□□□□ 0.41
DDX39A-215ENST00000590696 DAPP51397 102 aa17.64■□□□□ 0.41
DDX39A-215ENST00000590696 BCL2L15Q5TBC7 163 aa17.64■□□□□ 0.41
DDX39A-215ENST00000590696 ZNF782Q6ZMW2 699 aaPredicted RBP17.64■□□□□ 0.41
DDX39A-215ENST00000590696 LIAT1Q6ZQX7 453 aa17.64■□□□□ 0.41
DDX39A-215ENST00000590696 MEPCEQ7L2J0 689 aaKnown RBP17.64■□□□□ 0.41
DDX39A-215ENST00000590696 LHFPL4Q7Z7J7 247 aa17.64■□□□□ 0.41
DDX39A-215ENST00000590696 SLC35F2Q8IXU6 374 aa17.64■□□□□ 0.41
DDX39A-215ENST00000590696 ELMOD2Q8IZ81 293 aa17.64■□□□□ 0.41
DDX39A-215ENST00000590696 OR14K1Q8NGZ2 314 aa17.64■□□□□ 0.41
DDX39A-215ENST00000590696 NRBF2Q96F24 287 aa17.64■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms