RNA–Protein interactions for RNA: ENST00000586813.5

TRAF4-216, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 789 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-216ENST00000586813 TMEM200BQ69YZ2 307 aa15.71■□□□□ 0.11
TRAF4-216ENST00000586813 LIAT1Q6ZQX7 453 aa15.71■□□□□ 0.11
TRAF4-216ENST00000586813 C11orf42Q8N5U0 333 aa15.71■□□□□ 0.11
TRAF4-216ENST00000586813 TEAD3Q99594 435 aa15.71■□□□□ 0.11
TRAF4-216ENST00000586813 NPFFR1Q9GZQ6 430 aa15.71■□□□□ 0.11
TRAF4-216ENST00000586813 HEXA-AS1Q9H8Q6 139 aa15.71■□□□□ 0.11
TRAF4-216ENST00000586813 SLC25A19Q9HC21 320 aa15.71■□□□□ 0.11
TRAF4-216ENST00000586813 NUFIP1Q9UHK0 495 aaKnown RBP15.71■□□□□ 0.11
TRAF4-216ENST00000586813 ENPP5Q9UJA9 477 aa15.71■□□□□ 0.11
TRAF4-216ENST00000586813 MEGF11A6BM72 1044 aa15.7■□□□□ 0.1
TRAF4-216ENST00000586813 CCDC182A6NF36 153 aa15.7■□□□□ 0.1
TRAF4-216ENST00000586813 GSC2O15499 205 aa15.7■□□□□ 0.1
TRAF4-216ENST00000586813 SYNGR1O43759 233 aa15.7■□□□□ 0.1
TRAF4-216ENST00000586813 ZNF254O75437 659 aa15.7■□□□□ 0.1
TRAF4-216ENST00000586813 DHRS3O75911 302 aa15.7■□□□□ 0.1
TRAF4-216ENST00000586813 PGA5P0DJD9 388 aa15.7■□□□□ 0.1
TRAF4-216ENST00000586813 COX7A1P24310 79 aa15.7■□□□□ 0.1
TRAF4-216ENST00000586813 BMXP51813 675 aa15.7■□□□□ 0.1
TRAF4-216ENST00000586813 MFGE8Q08431 387 aaPredicted RBP15.7■□□□□ 0.1
TRAF4-216ENST00000586813 ZNF829Q3KNS6 432 aaPredicted RBP15.7■□□□□ 0.1
TRAF4-216ENST00000586813 ZNF684Q5T5D7 378 aa15.7■□□□□ 0.1
TRAF4-216ENST00000586813 KPRPQ5T749 579 aaPredicted RBP15.7■□□□□ 0.1
TRAF4-216ENST00000586813 SAMD5Q5TGI4 173 aa15.7■□□□□ 0.1
TRAF4-216ENST00000586813 ZNF679Q8IYX0 411 aa15.7■□□□□ 0.1
TRAF4-216ENST00000586813 CANT1Q8WVQ1 401 aa15.7■□□□□ 0.1
TRAF4-216ENST00000586813 OR8B4Q96RC9 309 aa15.7■□□□□ 0.1
TRAF4-216ENST00000586813 TEX12Q9BXU0 123 aa15.7■□□□□ 0.1
TRAF4-216ENST00000586813 TTTY10Q9BZA0 68 aa15.7■□□□□ 0.1
TRAF4-216ENST00000586813 USE1Q9NZ43 259 aa15.7■□□□□ 0.1
TRAF4-216ENST00000586813 COPS3Q9UNS2 423 aa15.7■□□□□ 0.1
TRAF4-216ENST00000586813 hCG_1809904A0A1W2PP81 198 aa15.69■□□□□ 0.1
TRAF4-216ENST00000586813 A0A1W2PPE2 198 aa15.69■□□□□ 0.1
TRAF4-216ENST00000586813 A0A1W2PR64 198 aa15.69■□□□□ 0.1
TRAF4-216ENST00000586813 A0A1W2PRV1 198 aa15.69■□□□□ 0.1
TRAF4-216ENST00000586813 J3QT63 122 aa15.69■□□□□ 0.1
TRAF4-216ENST00000586813 NRASP01111 189 aa15.69■□□□□ 0.1
TRAF4-216ENST00000586813 TTRP02766 147 aa15.69■□□□□ 0.1
TRAF4-216ENST00000586813 T-ENOLP0DO92 83 aa15.69■□□□□ 0.1
TRAF4-216ENST00000586813 VSIG10L2P0DP72 767 aa15.69■□□□□ 0.1
TRAF4-216ENST00000586813 CCL3L1P16619 93 aa15.69■□□□□ 0.1
TRAF4-216ENST00000586813 PRKACGP22612 351 aa15.69■□□□□ 0.1
TRAF4-216ENST00000586813 PRDX2P32119 198 aa15.69■□□□□ 0.1
TRAF4-216ENST00000586813 HAAOP46952 286 aa15.69■□□□□ 0.1
TRAF4-216ENST00000586813 RIDAP52758 137 aaKnown RBP15.69■□□□□ 0.1
TRAF4-216ENST00000586813 ZNF273Q14593 569 aa15.69■□□□□ 0.1
TRAF4-216ENST00000586813 LCN1P1Q5VSP4 162 aa15.69■□□□□ 0.1
TRAF4-216ENST00000586813 OR4M1Q8NGD0 313 aa15.69■□□□□ 0.1
TRAF4-216ENST00000586813 PIFOQ8TCI5 191 aa15.69■□□□□ 0.1
TRAF4-216ENST00000586813 ASB17Q8WXJ9 295 aa15.69■□□□□ 0.1
TRAF4-216ENST00000586813 PPP1R14AQ96A00 147 aa15.69■□□□□ 0.1
TRAF4-216ENST00000586813 POLDIP2Q9Y2S7 368 aa15.69■□□□□ 0.1
TRAF4-216ENST00000586813 TMEM14AQ9Y6G1 99 aa15.69■□□□□ 0.1
TRAF4-216ENST00000586813 AQP12BA6NM10 295 aa15.68■□□□□ 0.1
TRAF4-216ENST00000586813 ANXA8P13928 327 aa15.68■□□□□ 0.1
TRAF4-216ENST00000586813 LGALS4P56470 323 aa15.68■□□□□ 0.1
TRAF4-216ENST00000586813 ERVFRD-1P60508 538 aa15.68■□□□□ 0.1
TRAF4-216ENST00000586813 SNAPC1Q16533 368 aa15.68■□□□□ 0.1
TRAF4-216ENST00000586813 TMEM42Q69YG0 159 aa15.68■□□□□ 0.1
TRAF4-216ENST00000586813 ZNF782Q6ZMW2 699 aaPredicted RBP15.68■□□□□ 0.1
TRAF4-216ENST00000586813 ZNF573Q86YE8 665 aa15.68■□□□□ 0.1
TRAF4-216ENST00000586813 AQP12AQ8IXF9 295 aa15.68■□□□□ 0.1
TRAF4-216ENST00000586813 DTX3Q8N9I9 347 aa15.68■□□□□ 0.1
TRAF4-216ENST00000586813 NKX3-1Q99801 234 aaPredicted RBP15.68■□□□□ 0.1
TRAF4-216ENST00000586813 NRIP2Q9BQI9 281 aa15.68■□□□□ 0.1
TRAF4-216ENST00000586813 C1orf21Q9H246 121 aa15.68■□□□□ 0.1
TRAF4-216ENST00000586813 TVP23BQ9NYZ1 205 aa15.68■□□□□ 0.1
TRAF4-216ENST00000586813 IKZF2Q9UKS7 526 aa15.68■□□□□ 0.1
TRAF4-216ENST00000586813 PQLC2LA1A4F0 135 aa15.67■□□□□ 0.1
TRAF4-216ENST00000586813 NOS1APO75052 506 aaPredicted RBP15.67■□□□□ 0.1
TRAF4-216ENST00000586813 SRSF10O75494 262 aaKnown RBP15.67■□□□□ 0.1
TRAF4-216ENST00000586813 NXPH2O95156 264 aa15.67■□□□□ 0.1
TRAF4-216ENST00000586813 TK1P04183 234 aa15.67■□□□□ 0.1
TRAF4-216ENST00000586813 HOXB6P17509 224 aaKnown RBP15.67■□□□□ 0.1
TRAF4-216ENST00000586813 FBLN7Q53RD9 439 aa15.67■□□□□ 0.1
TRAF4-216ENST00000586813 CLVS2Q5SYC1 327 aa15.67■□□□□ 0.1
TRAF4-216ENST00000586813 LHFPL4Q7Z7J7 247 aa15.67■□□□□ 0.1
TRAF4-216ENST00000586813 BATF2Q8N1L9 274 aa15.67■□□□□ 0.1
TRAF4-216ENST00000586813 OR2T27Q8NH04 317 aa15.67■□□□□ 0.1
TRAF4-216ENST00000586813 CNN2Q99439 309 aaKnown RBP15.67■□□□□ 0.1
TRAF4-216ENST00000586813 MOB1AQ9H8S9 216 aa15.67■□□□□ 0.1
TRAF4-216ENST00000586813 ZNF702PQ9H963 129 aa15.67■□□□□ 0.1
TRAF4-216ENST00000586813 HES4Q9HCC6 221 aa15.67■□□□□ 0.1
TRAF4-216ENST00000586813 GPR173Q9NS66 373 aa15.67■□□□□ 0.1
TRAF4-216ENST00000586813 FAM90A8PA6NJQ4 464 aa15.66■□□□□ 0.1
TRAF4-216ENST00000586813 VGLL3A8MV65 326 aa15.66■□□□□ 0.1
TRAF4-216ENST00000586813 LOC110117498-PIK3R3F6TDL0 507 aa15.66■□□□□ 0.1
TRAF4-216ENST00000586813 DLGAP1O14490 977 aa15.66■□□□□ 0.1
TRAF4-216ENST00000586813 PIPP12273 146 aaPredicted RBP15.66■□□□□ 0.1
TRAF4-216ENST00000586813 CALHM1Q8IU99 346 aa15.66■□□□□ 0.1
TRAF4-216ENST00000586813 DYNAPQ8N1N2 210 aa15.66■□□□□ 0.1
TRAF4-216ENST00000586813 THTPAQ9BU02 230 aa15.66■□□□□ 0.1
TRAF4-216ENST00000586813 OR14J1Q9UGF5 321 aa15.66■□□□□ 0.1
TRAF4-216ENST00000586813 GTF2A1LQ9UNN4 478 aa15.66■□□□□ 0.1
TRAF4-216ENST00000586813 TCF19Q9Y242 345 aa15.66■□□□□ 0.1
TRAF4-216ENST00000586813 FBXO24O75426 580 aa15.65■□□□□ 0.1
TRAF4-216ENST00000586813 PRB2P02812 416 aaPredicted RBP15.65■□□□□ 0.1
TRAF4-216ENST00000586813 MPZP25189 248 aa15.65■□□□□ 0.1
TRAF4-216ENST00000586813 DLX6P56179 175 aa15.65■□□□□ 0.1
TRAF4-216ENST00000586813 ESRRGP62508 458 aa15.65■□□□□ 0.1
TRAF4-216ENST00000586813 HABP2Q14520 560 aaPredicted RBP15.65■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 63.5 ms