RNA–Protein interactions for RNA: ENST00000586058.1

LIG3-206, Transcript of DNA ligase 3, humanhuman

TSL 2

Gene LIG3, Length 581 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-206ENST00000586058 ATP6V1G2-DDX39BF2Z307 99 aa5.31□□□□□ -1.56
LIG3-206ENST00000586058 J3QT63 122 aa5.31□□□□□ -1.56
LIG3-206ENST00000586058 LYRM1O43325 122 aa5.31□□□□□ -1.56
LIG3-206ENST00000586058 SPRY1O43609 319 aaPredicted RBP5.31□□□□□ -1.56
LIG3-206ENST00000586058 GSTZ1O43708 216 aaPredicted RBP5.31□□□□□ -1.56
LIG3-206ENST00000586058 CLDN14O95500 239 aa5.31□□□□□ -1.56
LIG3-206ENST00000586058 HLA-DQB1P01920 261 aa5.31□□□□□ -1.56
LIG3-206ENST00000586058 CD3GP09693 182 aa5.31□□□□□ -1.56
LIG3-206ENST00000586058 CSF3P09919 207 aa5.31□□□□□ -1.56
LIG3-206ENST00000586058 IRF2P14316 349 aa5.31□□□□□ -1.56
LIG3-206ENST00000586058 AGAP20933 346 aa5.31□□□□□ -1.56
LIG3-206ENST00000586058 KITLGP21583 273 aa5.31□□□□□ -1.56
LIG3-206ENST00000586058 CD40P25942 277 aa5.31□□□□□ -1.56
LIG3-206ENST00000586058 CCKARP32238 428 aa5.31□□□□□ -1.56
LIG3-206ENST00000586058 SRP9P49458 86 aaKnown RBP5.31□□□□□ -1.56
LIG3-206ENST00000586058 FABP6P51161 128 aa5.31□□□□□ -1.56
LIG3-206ENST00000586058 TAS2R19P59542 299 aa5.31□□□□□ -1.56
LIG3-206ENST00000586058 RPS27AP62979 156 aaKnown RBP5.31□□□□□ -1.56
LIG3-206ENST00000586058 TLE1Q04724 770 aa5.31□□□□□ -1.56
LIG3-206ENST00000586058 IL24Q13007 206 aa5.31□□□□□ -1.56
LIG3-206ENST00000586058 ASAH1Q13510 395 aa5.31□□□□□ -1.56
LIG3-206ENST00000586058 PNLIPRP3Q17RR3 467 aa5.31□□□□□ -1.56
LIG3-206ENST00000586058 FBXL19-AS1Q494R0 122 aa5.31□□□□□ -1.56
LIG3-206ENST00000586058 ACTBL2Q562R1 376 aa5.31□□□□□ -1.56
LIG3-206ENST00000586058 BEX5Q5H9J7 111 aa5.31□□□□□ -1.56
LIG3-206ENST00000586058 NKAPLQ5M9Q1 402 aa5.31□□□□□ -1.56
LIG3-206ENST00000586058 ASPHD2Q6ICH7 369 aa5.31□□□□□ -1.56
LIG3-206ENST00000586058 HAGHLQ6PII5 290 aaPredicted RBP5.31□□□□□ -1.56
LIG3-206ENST00000586058 PLET1Q6UQ28 207 aa5.31□□□□□ -1.56
LIG3-206ENST00000586058 Q6ZTK2 550 aa5.31□□□□□ -1.56
LIG3-206ENST00000586058 NCCRP1Q6ZVX7 275 aaPredicted RBP5.31□□□□□ -1.56
LIG3-206ENST00000586058 SLC25A26Q70HW3 274 aa5.31□□□□□ -1.56
LIG3-206ENST00000586058 MYPOPQ86VE0 399 aaPredicted RBP5.31□□□□□ -1.56
LIG3-206ENST00000586058 NUP37Q8NFH4 326 aa5.31□□□□□ -1.56
LIG3-206ENST00000586058 OR10R2Q8NGX6 335 aa5.31□□□□□ -1.56
LIG3-206ENST00000586058 LILRB4Q8NHJ6 448 aa5.31□□□□□ -1.56
LIG3-206ENST00000586058 NEK7Q8TDX7 302 aa5.31□□□□□ -1.56
LIG3-206ENST00000586058 OR5P3Q8WZ94 311 aa5.31□□□□□ -1.56
LIG3-206ENST00000586058 EMG1Q92979 244 aaKnown RBP5.31□□□□□ -1.56
LIG3-206ENST00000586058 SLC25A28Q96A46 364 aa5.31□□□□□ -1.56
LIG3-206ENST00000586058 MARS2Q96GW9 593 aaKnown RBP5.31□□□□□ -1.56
LIG3-206ENST00000586058 DIRC2Q96SL1 478 aa5.31□□□□□ -1.56
LIG3-206ENST00000586058 CXXC4Q9H2H0 198 aa5.31□□□□□ -1.56
LIG3-206ENST00000586058 DPAGT1Q9H3H5 408 aa5.31□□□□□ -1.56
LIG3-206ENST00000586058 KCNK15Q9H427 330 aa5.31□□□□□ -1.56
LIG3-206ENST00000586058 BANF2Q9H503 90 aa5.31□□□□□ -1.56
LIG3-206ENST00000586058 SPACA1Q9HBV2 294 aa5.31□□□□□ -1.56
LIG3-206ENST00000586058 DYNLRB1Q9NP97 96 aa5.31□□□□□ -1.56
LIG3-206ENST00000586058 PLEKHJ1Q9NW61 149 aa5.31□□□□□ -1.56
LIG3-206ENST00000586058 MYEF2Q9P2K5 600 aaKnown RBP5.31□□□□□ -1.56
LIG3-206ENST00000586058 PLEKHA6Q9Y2H5 1048 aa5.31□□□□□ -1.56
LIG3-206ENST00000586058 CACNG2Q9Y698 323 aa5.31□□□□□ -1.56
LIG3-206ENST00000586058 SPTBN4Q9H254 2564 aa5.31□□□□□ -1.56
LIG3-206ENST00000586058 DYSFO75923 2080 aa5.3□□□□□ -1.56
LIG3-206ENST00000586058 NKX2-6A6NCS4 301 aa5.3□□□□□ -1.56
LIG3-206ENST00000586058 FAM90A10PA6NDY2 464 aa5.3□□□□□ -1.56
LIG3-206ENST00000586058 FAM90A18PA6NE21 464 aa5.3□□□□□ -1.56
LIG3-206ENST00000586058 FAM90A16PA6NEW6 464 aa5.3□□□□□ -1.56
LIG3-206ENST00000586058 FAM90A20PA6NIJ5 464 aa5.3□□□□□ -1.56
LIG3-206ENST00000586058 FAM90A8PA6NJQ4 464 aa5.3□□□□□ -1.56
LIG3-206ENST00000586058 FAM90A7PA6NKC0 464 aa5.3□□□□□ -1.56
LIG3-206ENST00000586058 FAM90A22PA8MWA6 464 aa5.3□□□□□ -1.56
LIG3-206ENST00000586058 FAM90A12PA8MX19 464 aa5.3□□□□□ -1.56
LIG3-206ENST00000586058 FAM90A5PA8MXJ8 464 aa5.3□□□□□ -1.56
LIG3-206ENST00000586058 FAM90A23PA8MXZ1 464 aa5.3□□□□□ -1.56
LIG3-206ENST00000586058 AKR7A2O43488 359 aa5.3□□□□□ -1.56
LIG3-206ENST00000586058 FAM90A15PP0C7V4 464 aa5.3□□□□□ -1.56
LIG3-206ENST00000586058 FAM90A13PP0C7W8 464 aa5.3□□□□□ -1.56
LIG3-206ENST00000586058 FAM90A14PP0C7W9 464 aa5.3□□□□□ -1.56
LIG3-206ENST00000586058 FAM90A24PP0C7X0 464 aa5.3□□□□□ -1.56
LIG3-206ENST00000586058 AKAIN1P0CW23 69 aa5.3□□□□□ -1.56
LIG3-206ENST00000586058 CD37P11049 281 aa5.3□□□□□ -1.56
LIG3-206ENST00000586058 NAT2P11245 290 aa5.3□□□□□ -1.56
LIG3-206ENST00000586058 HIST1H1DP16402 221 aaKnown RBP5.3□□□□□ -1.56
LIG3-206ENST00000586058 PRKACAP17612 351 aa5.3□□□□□ -1.56
LIG3-206ENST00000586058 TNFRSF1AP19438 455 aa5.3□□□□□ -1.56
LIG3-206ENST00000586058 BLVRBP30043 206 aaPredicted RBP5.3□□□□□ -1.56
LIG3-206ENST00000586058 CALCRP30988 508 aa5.3□□□□□ -1.56
LIG3-206ENST00000586058 MPV17P39210 176 aa5.3□□□□□ -1.56
LIG3-206ENST00000586058 GDNFP39905 211 aa5.3□□□□□ -1.56
LIG3-206ENST00000586058 EFNB2P52799 333 aa5.3□□□□□ -1.56
LIG3-206ENST00000586058 RBM11P57052 281 aaKnown RBP5.3□□□□□ -1.56
LIG3-206ENST00000586058 ARPC4P59998 168 aa5.3□□□□□ -1.56
LIG3-206ENST00000586058 ZP1P60852 638 aa5.3□□□□□ -1.56
LIG3-206ENST00000586058 ERVS71-1P61550 626 aa5.3□□□□□ -1.56
LIG3-206ENST00000586058 DGCR2P98153 550 aa5.3□□□□□ -1.56
LIG3-206ENST00000586058 BSPH1Q075Z2 132 aa5.3□□□□□ -1.56
LIG3-206ENST00000586058 PSG7Q13046 419 aa5.3□□□□□ -1.56
LIG3-206ENST00000586058 PDZK1IP1Q13113 114 aa5.3□□□□□ -1.56
LIG3-206ENST00000586058 UNC119Q13432 240 aa5.3□□□□□ -1.56
LIG3-206ENST00000586058 TNK1Q13470 666 aa5.3□□□□□ -1.56
LIG3-206ENST00000586058 DYRK1AQ13627 763 aa5.3□□□□□ -1.56
LIG3-206ENST00000586058 RBM39Q14498 530 aaKnown RBP5.3□□□□□ -1.56
LIG3-206ENST00000586058 MEF2DQ14814 521 aa5.3□□□□□ -1.56
LIG3-206ENST00000586058 BAK1Q16611 211 aa5.3□□□□□ -1.56
LIG3-206ENST00000586058 MPV17LQ2QL34 196 aa5.3□□□□□ -1.56
LIG3-206ENST00000586058 PCGF3Q3KNV8 242 aa5.3□□□□□ -1.56
LIG3-206ENST00000586058 ATAD3CQ5T2N8 411 aa5.3□□□□□ -1.56
LIG3-206ENST00000586058 RSBN1Q5VWQ0 802 aaPredicted RBP5.3□□□□□ -1.56
LIG3-206ENST00000586058 OR10K2Q6IF99 312 aa5.3□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms