RNA–Protein interactions for RNA: ENST00000585799.5

SMARCA4-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 2

Gene SMARCA4, Length 3,842 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-208ENST00000585799 RAG2P55895 527 aa10.87□□□□□ -0.67
SMARCA4-208ENST00000585799 ZNF260Q3ZCT1 412 aa10.87□□□□□ -0.67
SMARCA4-208ENST00000585799 FAM74A1Q5RGS3 127 aa10.87□□□□□ -0.67
SMARCA4-208ENST00000585799 SNIP1Q8TAD8 396 aaKnown RBP10.87□□□□□ -0.67
SMARCA4-208ENST00000585799 PPP1R1CQ8WVI7 109 aa10.87□□□□□ -0.67
SMARCA4-208ENST00000585799 PSMF1Q92530 271 aa10.87□□□□□ -0.67
SMARCA4-208ENST00000585799 ZNF286AQ9HBT8 521 aa10.87□□□□□ -0.67
SMARCA4-208ENST00000585799 SHPKQ9UHJ6 478 aa10.87□□□□□ -0.67
SMARCA4-208ENST00000585799 FBXO9Q9UK97 447 aaPredicted RBP10.87□□□□□ -0.67
SMARCA4-208ENST00000585799 LIPGQ9Y5X9 500 aa10.87□□□□□ -0.67
SMARCA4-208ENST00000585799 AKAP6Q13023 2319 aa10.86□□□□□ -0.67
SMARCA4-208ENST00000585799 ADAP1O75689 374 aa10.86□□□□□ -0.67
SMARCA4-208ENST00000585799 CA6P23280 308 aa10.86□□□□□ -0.67
SMARCA4-208ENST00000585799 AGTR1P30556 359 aa10.86□□□□□ -0.67
SMARCA4-208ENST00000585799 LUMP51884 338 aaPredicted RBP10.86□□□□□ -0.67
SMARCA4-208ENST00000585799 ASPHD2Q6ICH7 369 aa10.86□□□□□ -0.67
SMARCA4-208ENST00000585799 OSR2Q8N2R0 312 aa10.86□□□□□ -0.67
SMARCA4-208ENST00000585799 VRK1Q99986 396 aaPredicted RBP10.86□□□□□ -0.67
SMARCA4-208ENST00000585799 CSAG2Q9Y5P2 127 aa10.86□□□□□ -0.67
SMARCA4-208ENST00000585799 XRCC2O43543 280 aa10.86□□□□□ -0.67
SMARCA4-208ENST00000585799 NGFP01138 241 aa10.86□□□□□ -0.67
SMARCA4-208ENST00000585799 TAS2R31P59538 309 aa10.86□□□□□ -0.67
SMARCA4-208ENST00000585799 LTC4SQ16873 150 aa10.86□□□□□ -0.67
SMARCA4-208ENST00000585799 C2orf68Q2NKX9 166 aa10.86□□□□□ -0.67
SMARCA4-208ENST00000585799 TMEM123Q8N131 208 aa10.86□□□□□ -0.67
SMARCA4-208ENST00000585799 CHST5Q9GZS9 411 aa10.86□□□□□ -0.67
SMARCA4-208ENST00000585799 VSIG4Q9Y279 399 aa10.86□□□□□ -0.67
SMARCA4-208ENST00000585799 STARD10Q9Y365 291 aa10.86□□□□□ -0.67
SMARCA4-208ENST00000585799 KIAA2026Q5HYC2 2103 aa10.86□□□□□ -0.67
SMARCA4-208ENST00000585799 E9PLN8 166 aa10.86□□□□□ -0.67
SMARCA4-208ENST00000585799 IGFBP3P17936 291 aaPredicted RBP10.86□□□□□ -0.67
SMARCA4-208ENST00000585799 EPHA1P21709 976 aa10.86□□□□□ -0.67
SMARCA4-208ENST00000585799 S100GP29377 79 aa10.86□□□□□ -0.67
SMARCA4-208ENST00000585799 FGL1Q08830 312 aa10.86□□□□□ -0.67
SMARCA4-208ENST00000585799 PRDX4Q13162 271 aa10.86□□□□□ -0.67
SMARCA4-208ENST00000585799 SUMF1Q8NBK3 374 aa10.86□□□□□ -0.67
SMARCA4-208ENST00000585799 ZNF488Q96MN9 340 aa10.86□□□□□ -0.67
SMARCA4-208ENST00000585799 PECRQ9BY49 303 aa10.86□□□□□ -0.67
SMARCA4-208ENST00000585799 WNT5BQ9H1J7 359 aa10.86□□□□□ -0.67
SMARCA4-208ENST00000585799 ZNF703Q9H7S9 590 aaPredicted RBP10.86□□□□□ -0.67
SMARCA4-208ENST00000585799 MBD2Q9UBB5 411 aa10.86□□□□□ -0.67
SMARCA4-208ENST00000585799 DIDO1Q9BTC0 2240 aaKnown RBP10.86□□□□□ -0.67
SMARCA4-208ENST00000585799 MCRIP1C9JLW8 97 aa10.85□□□□□ -0.67
SMARCA4-208ENST00000585799 ZNF728P0DKX0 622 aa10.85□□□□□ -0.67
SMARCA4-208ENST00000585799 FCGR2CP31995 323 aa10.85□□□□□ -0.67
SMARCA4-208ENST00000585799 P2RY4P51582 365 aa10.85□□□□□ -0.67
SMARCA4-208ENST00000585799 DEFA5Q01523 94 aa10.85□□□□□ -0.67
SMARCA4-208ENST00000585799 CAMK2BQ13554 666 aa10.85□□□□□ -0.67
SMARCA4-208ENST00000585799 ALKBH6Q3KRA9 238 aa10.85□□□□□ -0.67
SMARCA4-208ENST00000585799 LYG2Q86SG7 212 aa10.85□□□□□ -0.67
SMARCA4-208ENST00000585799 ZADH2Q8N4Q0 377 aa10.85□□□□□ -0.67
SMARCA4-208ENST00000585799 FDCSPQ8NFU4 85 aa10.85□□□□□ -0.67
SMARCA4-208ENST00000585799 HAS2Q92819 552 aa10.85□□□□□ -0.67
SMARCA4-208ENST00000585799 TMEM54Q969K7 222 aa10.85□□□□□ -0.67
SMARCA4-208ENST00000585799 IGKV1-9A0A0C4DH69 117 aa10.85□□□□□ -0.67
SMARCA4-208ENST00000585799 ZP1P60852 638 aa10.85□□□□□ -0.67
SMARCA4-208ENST00000585799 GK2Q14410 553 aaPredicted RBP10.85□□□□□ -0.67
SMARCA4-208ENST00000585799 IAH1Q2TAA2 248 aaPredicted RBP10.85□□□□□ -0.67
SMARCA4-208ENST00000585799 THOC7Q6I9Y2 204 aaKnown RBP10.85□□□□□ -0.67
SMARCA4-208ENST00000585799 LHFPL2Q6ZUX7 228 aa10.85□□□□□ -0.67
SMARCA4-208ENST00000585799 EMG1Q92979 244 aaKnown RBP10.85□□□□□ -0.67
SMARCA4-208ENST00000585799 SLC25A28Q96A46 364 aa10.85□□□□□ -0.67
SMARCA4-208ENST00000585799 ABCA4P78363 2273 aa10.85□□□□□ -0.67
SMARCA4-208ENST00000585799 TRAV39A0A0B4J263 110 aa10.85□□□□□ -0.67
SMARCA4-208ENST00000585799 BIVMQ86UB2 503 aa10.85□□□□□ -0.67
SMARCA4-208ENST00000585799 ZDHHC23Q8IYP9 409 aa10.85□□□□□ -0.67
SMARCA4-208ENST00000585799 FBXW5Q969U6 566 aa10.85□□□□□ -0.67
SMARCA4-208ENST00000585799 SPSB1Q96BD6 273 aa10.85□□□□□ -0.67
SMARCA4-208ENST00000585799 TAS2R3Q9NYW6 316 aa10.85□□□□□ -0.67
SMARCA4-208ENST00000585799 EFSO43281 561 aa10.84□□□□□ -0.67
SMARCA4-208ENST00000585799 AGFG2O95081 481 aa10.84□□□□□ -0.67
SMARCA4-208ENST00000585799 SLC34A2O95436 690 aa10.84□□□□□ -0.67
SMARCA4-208ENST00000585799 PRH1P02810 166 aa10.84□□□□□ -0.67
SMARCA4-208ENST00000585799 FUT6P51993 359 aa10.84□□□□□ -0.67
SMARCA4-208ENST00000585799 RPS27AP62979 156 aaKnown RBP10.84□□□□□ -0.67
SMARCA4-208ENST00000585799 H3F3AP84243 136 aa10.84□□□□□ -0.67
SMARCA4-208ENST00000585799 PPA1Q15181 289 aa10.84□□□□□ -0.67
SMARCA4-208ENST00000585799 IGFBP7Q16270 282 aa10.84□□□□□ -0.67
SMARCA4-208ENST00000585799 ACTBL2Q562R1 376 aa10.84□□□□□ -0.67
SMARCA4-208ENST00000585799 C10orf128Q5T292 105 aa10.84□□□□□ -0.67
SMARCA4-208ENST00000585799 OR2W3Q7Z3T1 314 aa10.84□□□□□ -0.67
SMARCA4-208ENST00000585799 GGNQ86UU5 652 aa10.84□□□□□ -0.67
SMARCA4-208ENST00000585799 FAM109AQ8N4B1 249 aa10.84□□□□□ -0.67
SMARCA4-208ENST00000585799 LYZL4Q96KX0 146 aa10.84□□□□□ -0.67
SMARCA4-208ENST00000585799 SIRPB1O00241 398 aa10.84□□□□□ -0.67
SMARCA4-208ENST00000585799 AGPAT2O15120 278 aa10.84□□□□□ -0.67
SMARCA4-208ENST00000585799 FBXO24O75426 580 aa10.84□□□□□ -0.67
SMARCA4-208ENST00000585799 NXPH2O95156 264 aa10.84□□□□□ -0.67
SMARCA4-208ENST00000585799 ANOS1P23352 680 aa10.84□□□□□ -0.67
SMARCA4-208ENST00000585799 FOXC1Q12948 553 aa10.84□□□□□ -0.67
SMARCA4-208ENST00000585799 SWI5Q1ZZU3 235 aa10.84□□□□□ -0.67
SMARCA4-208ENST00000585799 TBC1D28Q2M2D7 210 aa10.84□□□□□ -0.67
SMARCA4-208ENST00000585799 TEX261Q6UWH6 196 aa10.84□□□□□ -0.67
SMARCA4-208ENST00000585799 C17orf78Q8N4C9 275 aa10.84□□□□□ -0.67
SMARCA4-208ENST00000585799 PAQR4Q8N4S7 273 aaPredicted RBP10.84□□□□□ -0.67
SMARCA4-208ENST00000585799 APOBEC3DQ96AK3 386 aaPredicted RBP10.84□□□□□ -0.67
SMARCA4-208ENST00000585799 U3KQ87 197 aa10.84□□□□□ -0.67
SMARCA4-208ENST00000585799 ZNF716A6NP11 495 aa10.84□□□□□ -0.67
SMARCA4-208ENST00000585799 LINC01387J3KSC0 135 aa10.84□□□□□ -0.67
SMARCA4-208ENST00000585799 DNPH1O43598 174 aa10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms