RNA–Protein interactions for RNA: ENST00000583438.1

PPP4R1-225, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 4

Gene PPP4R1, Length 564 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-225ENST00000583438 DYDC1Q8WWB3 177 aa6.33□□□□□ -1.4
PPP4R1-225ENST00000583438 SLAMF6Q96DU3 332 aa6.33□□□□□ -1.4
PPP4R1-225ENST00000583438 RAB3IPQ96QF0 476 aaPredicted RBP6.33□□□□□ -1.4
PPP4R1-225ENST00000583438 SSX3Q99909 188 aa6.33□□□□□ -1.4
PPP4R1-225ENST00000583438 CITED2Q99967 270 aaPredicted RBP6.33□□□□□ -1.4
PPP4R1-225ENST00000583438 NMNAT2Q9BZQ4 307 aa6.33□□□□□ -1.4
PPP4R1-225ENST00000583438 DPAGT1Q9H3H5 408 aa6.33□□□□□ -1.4
PPP4R1-225ENST00000583438 SP140LQ9H930 580 aa6.33□□□□□ -1.4
PPP4R1-225ENST00000583438 MED20Q9H944 212 aa6.33□□□□□ -1.4
PPP4R1-225ENST00000583438 ABCD2Q9UBJ2 740 aa6.33□□□□□ -1.4
PPP4R1-225ENST00000583438 KCNG2Q9UJ96 466 aa6.33□□□□□ -1.4
PPP4R1-225ENST00000583438 KLHDC2Q9Y2U9 406 aa6.33□□□□□ -1.4
PPP4R1-225ENST00000583438 N6AMT1Q9Y5N5 214 aa6.33□□□□□ -1.4
PPP4R1-225ENST00000583438 BIRC6Q9NR09 4857 aa6.33□□□□□ -1.4
PPP4R1-225ENST00000583438 STARD9Q9P2P6 4700 aa6.32□□□□□ -1.4
PPP4R1-225ENST00000583438 LOC102723971A0A1B0GUV8 181 aa6.32□□□□□ -1.4
PPP4R1-225ENST00000583438 DHRS12A0PJE2 317 aa6.32□□□□□ -1.4
PPP4R1-225ENST00000583438 RAB27BO00194 218 aa6.32□□□□□ -1.4
PPP4R1-225ENST00000583438 NDUFA2O43678 99 aa6.32□□□□□ -1.4
PPP4R1-225ENST00000583438 ECDO95905 644 aaPredicted RBP6.32□□□□□ -1.4
PPP4R1-225ENST00000583438 NPPAP01160 153 aa6.32□□□□□ -1.4
PPP4R1-225ENST00000583438 TROVE2P10155 538 aaKnown RBP eCLIP6.32□□□□□ -1.4
PPP4R1-225ENST00000583438 CCL3L1P16619 93 aa6.32□□□□□ -1.4
PPP4R1-225ENST00000583438 CRABP1P29762 137 aa6.32□□□□□ -1.4
PPP4R1-225ENST00000583438 PPIFP30405 207 aaKnown RBP6.32□□□□□ -1.4
PPP4R1-225ENST00000583438 RPS6KA3P51812 740 aa6.32□□□□□ -1.4
PPP4R1-225ENST00000583438 UBE2E1P51965 193 aa6.32□□□□□ -1.4
PPP4R1-225ENST00000583438 DLX6P56179 175 aa6.32□□□□□ -1.4
PPP4R1-225ENST00000583438 TPTEP56180 551 aa6.32□□□□□ -1.4
PPP4R1-225ENST00000583438 PPP1R8Q12972 351 aaKnown RBP6.32□□□□□ -1.4
PPP4R1-225ENST00000583438 ECH1Q13011 328 aa6.32□□□□□ -1.4
PPP4R1-225ENST00000583438 CRMP1Q14194 572 aa6.32□□□□□ -1.4
PPP4R1-225ENST00000583438 ZNF273Q14593 569 aa6.32□□□□□ -1.4
PPP4R1-225ENST00000583438 LCE1DQ5T752 114 aa6.32□□□□□ -1.4
PPP4R1-225ENST00000583438 DRAM2Q6UX65 266 aa6.32□□□□□ -1.4
PPP4R1-225ENST00000583438 TCF23Q7RTU1 214 aa6.32□□□□□ -1.4
PPP4R1-225ENST00000583438 DPY19L4Q7Z388 723 aa6.32□□□□□ -1.4
PPP4R1-225ENST00000583438 TMEM219Q86XT9 240 aa6.32□□□□□ -1.4
PPP4R1-225ENST00000583438 Q8N2B8 174 aa6.32□□□□□ -1.4
PPP4R1-225ENST00000583438 LZICQ8WZA0 190 aa6.32□□□□□ -1.4
PPP4R1-225ENST00000583438 H1FXQ92522 213 aaKnown RBP6.32□□□□□ -1.4
PPP4R1-225ENST00000583438 DUS3LQ96G46 650 aaKnown RBP6.32□□□□□ -1.4
PPP4R1-225ENST00000583438 ZNF488Q96MN9 340 aa6.32□□□□□ -1.4
PPP4R1-225ENST00000583438 SH3GL1Q99961 368 aa6.32□□□□□ -1.4
PPP4R1-225ENST00000583438 IFT27Q9BW83 186 aa6.32□□□□□ -1.4
PPP4R1-225ENST00000583438 RNPEPL1Q9HAU8 725 aa6.32□□□□□ -1.4
PPP4R1-225ENST00000583438 DCAF13Q9NV06 445 aaKnown RBP6.32□□□□□ -1.4
PPP4R1-225ENST00000583438 NECAP2Q9NVZ3 263 aa6.32□□□□□ -1.4
PPP4R1-225ENST00000583438 HAO2Q9NYQ3 351 aa6.32□□□□□ -1.4
PPP4R1-225ENST00000583438 DNAJC27Q9NZQ0 273 aa6.32□□□□□ -1.4
PPP4R1-225ENST00000583438 ZNF391Q9UJN7 358 aa6.32□□□□□ -1.4
PPP4R1-225ENST00000583438 FAM96BQ9Y3D0 163 aa6.32□□□□□ -1.4
PPP4R1-225ENST00000583438 HYDINQ4G0P3 5121 aa6.31□□□□□ -1.4
PPP4R1-225ENST00000583438 SIGLEC5O15389 551 aa6.31□□□□□ -1.4
PPP4R1-225ENST00000583438 ANGPTL7O43827 346 aa6.31□□□□□ -1.4
PPP4R1-225ENST00000583438 RENP00797 406 aa6.31□□□□□ -1.4
PPP4R1-225ENST00000583438 HLA-DQA2P01906 255 aa6.31□□□□□ -1.4
PPP4R1-225ENST00000583438 SPARCP09486 303 aa6.31□□□□□ -1.4
PPP4R1-225ENST00000583438 PSG2P11465 335 aa6.31□□□□□ -1.4
PPP4R1-225ENST00000583438 COX4I1P13073 169 aa6.31□□□□□ -1.4
PPP4R1-225ENST00000583438 MUC1P15941 1255 aaPredicted RBP6.31□□□□□ -1.4
PPP4R1-225ENST00000583438 SPI1P17947 270 aa6.31□□□□□ -1.4
PPP4R1-225ENST00000583438 SLC6A6P31641 620 aa6.31□□□□□ -1.4
PPP4R1-225ENST00000583438 CX3CR1P49238 355 aa6.31□□□□□ -1.4
PPP4R1-225ENST00000583438 ZNF121P58317 390 aaPredicted RBP6.31□□□□□ -1.4
PPP4R1-225ENST00000583438 MICBQ29980 383 aa6.31□□□□□ -1.4
PPP4R1-225ENST00000583438 LRRC75BQ2VPJ9 315 aa6.31□□□□□ -1.4
PPP4R1-225ENST00000583438 UTF1Q5T230 341 aa6.31□□□□□ -1.4
PPP4R1-225ENST00000583438 DNM1P34Q6PK57 102 aa6.31□□□□□ -1.4
PPP4R1-225ENST00000583438 Q6ZTK2 550 aa6.31□□□□□ -1.4
PPP4R1-225ENST00000583438 FAM57BQ71RH2 274 aa6.31□□□□□ -1.4
PPP4R1-225ENST00000583438 BATF2Q8N1L9 274 aa6.31□□□□□ -1.4
PPP4R1-225ENST00000583438 CD177Q8N6Q3 437 aa6.31□□□□□ -1.4
PPP4R1-225ENST00000583438 OR4C15Q8NGM1 316 aa6.31□□□□□ -1.4
PPP4R1-225ENST00000583438 OR2AJ1Q8NGZ0 328 aa6.31□□□□□ -1.4
PPP4R1-225ENST00000583438 OR5R1Q8NH85 324 aa6.31□□□□□ -1.4
PPP4R1-225ENST00000583438 OR5P3Q8WZ94 311 aa6.31□□□□□ -1.4
PPP4R1-225ENST00000583438 FAM162AQ96A26 154 aa6.31□□□□□ -1.4
PPP4R1-225ENST00000583438 REEP6Q96HR9 211 aa6.31□□□□□ -1.4
PPP4R1-225ENST00000583438 OR5M11Q96RB7 305 aa6.31□□□□□ -1.4
PPP4R1-225ENST00000583438 AIFM2Q9BRQ8 373 aa6.31□□□□□ -1.4
PPP4R1-225ENST00000583438 COPS4Q9BT78 406 aa6.31□□□□□ -1.4
PPP4R1-225ENST00000583438 CDCA4Q9BXL8 241 aa6.31□□□□□ -1.4
PPP4R1-225ENST00000583438 KRTAP9-3Q9BYQ3 159 aa6.31□□□□□ -1.4
PPP4R1-225ENST00000583438 SLC22A4Q9H015 551 aa6.31□□□□□ -1.4
PPP4R1-225ENST00000583438 CENPMQ9NSP4 180 aa6.31□□□□□ -1.4
PPP4R1-225ENST00000583438 SLC25A10Q9UBX3 287 aaPredicted RBP6.31□□□□□ -1.4
PPP4R1-225ENST00000583438 DNAH1Q9P2D7 4330 aa6.31□□□□□ -1.4
PPP4R1-225ENST00000583438 A6NDX4 124 aa6.3□□□□□ -1.4
PPP4R1-225ENST00000583438 ANKRD61A6NGH8 418 aa6.3□□□□□ -1.4
PPP4R1-225ENST00000583438 NKX6-3A6NJ46 265 aa6.3□□□□□ -1.4
PPP4R1-225ENST00000583438 FAM90A8PA6NJQ4 464 aa6.3□□□□□ -1.4
PPP4R1-225ENST00000583438 FAM183AA6NL82 134 aa6.3□□□□□ -1.4
PPP4R1-225ENST00000583438 ZNF850A8MQ14 1090 aa6.3□□□□□ -1.4
PPP4R1-225ENST00000583438 M0R1W7 72 aa6.3□□□□□ -1.4
PPP4R1-225ENST00000583438 ZNF593O00488 134 aaPredicted RBP6.3□□□□□ -1.4
PPP4R1-225ENST00000583438 NDUFB3O43676 98 aa6.3□□□□□ -1.4
PPP4R1-225ENST00000583438 SOX14O95416 240 aa6.3□□□□□ -1.4
PPP4R1-225ENST00000583438 ACAA1P09110 424 aaPredicted RBP6.3□□□□□ -1.4
PPP4R1-225ENST00000583438 RRM2P31350 389 aa6.3□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms