RNA–Protein interactions for RNA: ENST00000582252.1

CCDC47-204, Transcript of coiled-coil domain containing 47, humanhuman

TSL 2 BASIC

Gene CCDC47, Length 1,719 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-204ENST00000582252 REPIN1Q9BWE0 567 aaKnown RBP19.6■□□□□ 0.73
CCDC47-204ENST00000582252 IL36GQ9NZH8 169 aa19.6■□□□□ 0.73
CCDC47-204ENST00000582252 CLCF1Q9UBD9 225 aa19.6■□□□□ 0.73
CCDC47-204ENST00000582252 DSPP15924 2871 aaKnown RBP19.6■□□□□ 0.73
CCDC47-204ENST00000582252 H3BUI4 141 aa19.59■□□□□ 0.73
CCDC47-204ENST00000582252 OR2A4O95047 310 aa19.59■□□□□ 0.73
CCDC47-204ENST00000582252 TAS2R46P59540 309 aa19.59■□□□□ 0.73
CCDC47-204ENST00000582252 LAMTOR1Q6IAA8 161 aa19.59■□□□□ 0.73
CCDC47-204ENST00000582252 RPUSD3Q6P087 351 aaKnown RBP19.59■□□□□ 0.73
CCDC47-204ENST00000582252 TMEM17Q86X19 198 aa19.59■□□□□ 0.73
CCDC47-204ENST00000582252 MUC20Q8N307 709 aaPredicted RBP19.59■□□□□ 0.73
CCDC47-204ENST00000582252 ST8SIA4Q92187 359 aa19.59■□□□□ 0.73
CCDC47-204ENST00000582252 POM121L2Q96KW2 1035 aa19.59■□□□□ 0.73
CCDC47-204ENST00000582252 OR2A7Q96R45 310 aa19.59■□□□□ 0.73
CCDC47-204ENST00000582252 K7EM74 188 aa19.59■□□□□ 0.73
CCDC47-204ENST00000582252 AMY2BP19961 511 aa19.59■□□□□ 0.73
CCDC47-204ENST00000582252 TGFBR3Q03167 851 aa19.59■□□□□ 0.73
CCDC47-204ENST00000582252 Q5BKY6 102 aa19.59■□□□□ 0.73
CCDC47-204ENST00000582252 HOGA1Q86XE5 327 aa19.59■□□□□ 0.73
CCDC47-204ENST00000582252 OR5H2Q8NGV7 314 aa19.59■□□□□ 0.73
CCDC47-204ENST00000582252 BCL2L2Q92843 193 aaPredicted RBP19.59■□□□□ 0.73
CCDC47-204ENST00000582252 CHIAQ9BZP6 476 aa19.59■□□□□ 0.73
CCDC47-204ENST00000582252 TP53TG5Q9Y2B4 290 aa19.59■□□□□ 0.73
CCDC47-204ENST00000582252 RAD51DO75771 328 aa19.58■□□□□ 0.72
CCDC47-204ENST00000582252 PMP2P02689 132 aa19.58■□□□□ 0.72
CCDC47-204ENST00000582252 FAHD2BQ6P2I3 314 aaPredicted RBP19.58■□□□□ 0.72
CCDC47-204ENST00000582252 CCDC36Q8IYA8 594 aa19.58■□□□□ 0.72
CCDC47-204ENST00000582252 ZSCAN4Q8NAM6 433 aaPredicted RBP19.58■□□□□ 0.72
CCDC47-204ENST00000582252 OR5L1Q8NGL2 311 aa19.58■□□□□ 0.72
CCDC47-204ENST00000582252 FAHD2AQ96GK7 314 aa19.58■□□□□ 0.72
CCDC47-204ENST00000582252 POM121Q96HA1 1249 aa19.58■□□□□ 0.72
CCDC47-204ENST00000582252 SCGB3A2Q96PL1 93 aa19.58■□□□□ 0.72
CCDC47-204ENST00000582252 CHST6Q9GZX3 395 aa19.58■□□□□ 0.72
CCDC47-204ENST00000582252 PLEKHJ1Q9NW61 149 aa19.58■□□□□ 0.72
CCDC47-204ENST00000582252 HSF4Q9ULV5 492 aa19.58■□□□□ 0.72
CCDC47-204ENST00000582252 ACACBO00763 2458 aa19.58■□□□□ 0.72
CCDC47-204ENST00000582252 MYO7BQ6PIF6 2116 aa19.58■□□□□ 0.72
CCDC47-204ENST00000582252 IGKV1-27A0A075B6S5 117 aa19.57■□□□□ 0.72
CCDC47-204ENST00000582252 AKR7A2O43488 359 aa19.57■□□□□ 0.72
CCDC47-204ENST00000582252 SPRY1O43609 319 aaPredicted RBP19.57■□□□□ 0.72
CCDC47-204ENST00000582252 IL18BPO95998 194 aa19.57■□□□□ 0.72
CCDC47-204ENST00000582252 C4BPBP20851 252 aa19.57■□□□□ 0.72
CCDC47-204ENST00000582252 GABRR1P24046 479 aa19.57■□□□□ 0.72
CCDC47-204ENST00000582252 TAS2R31P59538 309 aa19.57■□□□□ 0.72
CCDC47-204ENST00000582252 PDZK1IP1Q13113 114 aa19.57■□□□□ 0.72
CCDC47-204ENST00000582252 C11orf88Q6PI97 169 aa19.57■□□□□ 0.72
CCDC47-204ENST00000582252 SLC25A42Q86VD7 318 aa19.57■□□□□ 0.72
CCDC47-204ENST00000582252 C12orf45Q8N5I9 185 aaPredicted RBP19.57■□□□□ 0.72
CCDC47-204ENST00000582252 UXS1Q8NBZ7 420 aa19.57■□□□□ 0.72
CCDC47-204ENST00000582252 TRIB1Q96RU8 372 aa19.57■□□□□ 0.72
CCDC47-204ENST00000582252 CA10Q9NS85 328 aa19.57■□□□□ 0.72
CCDC47-204ENST00000582252 TUBD1Q9UJT1 453 aa19.57■□□□□ 0.72
CCDC47-204ENST00000582252 FREM1Q5H8C1 2179 aa19.57■□□□□ 0.72
CCDC47-204ENST00000582252 ZNF503-AS2A6NEH8 195 aa19.56■□□□□ 0.72
CCDC47-204ENST00000582252 RGS11O94810 467 aa19.56■□□□□ 0.72
CCDC47-204ENST00000582252 OR3A3P47888 321 aa19.56■□□□□ 0.72
CCDC47-204ENST00000582252 MICBQ29980 383 aa19.56■□□□□ 0.72
CCDC47-204ENST00000582252 RTN4RL2Q86UN3 420 aa19.56■□□□□ 0.72
CCDC47-204ENST00000582252 OR56B2PQ8NGI1 322 aa19.56■□□□□ 0.72
CCDC47-204ENST00000582252 FBXW5Q969U6 566 aa19.56■□□□□ 0.72
CCDC47-204ENST00000582252 PAPOLGQ9BWT3 736 aaKnown RBP19.56■□□□□ 0.72
CCDC47-204ENST00000582252 VSIG4Q9Y279 399 aa19.56■□□□□ 0.72
CCDC47-204ENST00000582252 BSNQ9UPA5 3926 aa19.56■□□□□ 0.72
CCDC47-204ENST00000582252 SPTA1P02549 2419 aa19.56■□□□□ 0.72
CCDC47-204ENST00000582252 ZZEF1O43149 2961 aa19.56■□□□□ 0.72
CCDC47-204ENST00000582252 ZNF850A8MQ14 1090 aa19.56■□□□□ 0.72
CCDC47-204ENST00000582252 F5H5P2 479 aa19.56■□□□□ 0.72
CCDC47-204ENST00000582252 GOSR2O14653 212 aa19.56■□□□□ 0.72
CCDC47-204ENST00000582252 ANGPTL7O43827 346 aa19.56■□□□□ 0.72
CCDC47-204ENST00000582252 PLATP00750 562 aa19.56■□□□□ 0.72
CCDC47-204ENST00000582252 CST4P01036 141 aa19.56■□□□□ 0.72
CCDC47-204ENST00000582252 PRSS12P56730 875 aa19.56■□□□□ 0.72
CCDC47-204ENST00000582252 SNRPD2P62316 118 aaKnown RBP19.56■□□□□ 0.72
CCDC47-204ENST00000582252 GTF3C1Q12789 2109 aa19.56■□□□□ 0.72
CCDC47-204ENST00000582252 ZNF767PQ75MW2 155 aa19.56■□□□□ 0.72
CCDC47-204ENST00000582252 FAM214BQ7L5A3 538 aa19.56■□□□□ 0.72
CCDC47-204ENST00000582252 OSR2Q8N2R0 312 aa19.56■□□□□ 0.72
CCDC47-204ENST00000582252 OR11H4Q8NGC9 324 aa19.56■□□□□ 0.72
CCDC47-204ENST00000582252 GPR137Q96N19 417 aa19.56■□□□□ 0.72
CCDC47-204ENST00000582252 PIPOXQ9P0Z9 390 aa19.56■□□□□ 0.72
CCDC47-204ENST00000582252 LHX6Q9UPM6 363 aa19.56■□□□□ 0.72
CCDC47-204ENST00000582252 J3QW42 95 aa19.55■□□□□ 0.72
CCDC47-204ENST00000582252 CNOT4O95628 575 aaKnown RBP19.55■□□□□ 0.72
CCDC47-204ENST00000582252 TSPAN5P62079 268 aa19.55■□□□□ 0.72
CCDC47-204ENST00000582252 HIKESHIQ53FT3 197 aa19.55■□□□□ 0.72
CCDC47-204ENST00000582252 ZDHHC23Q8IYP9 409 aa19.55■□□□□ 0.72
CCDC47-204ENST00000582252 TERB2Q8NHR7 220 aa19.55■□□□□ 0.72
CCDC47-204ENST00000582252 TAAR6Q96RI8 345 aa19.55■□□□□ 0.72
CCDC47-204ENST00000582252 EDARQ9UNE0 448 aa19.55■□□□□ 0.72
CCDC47-204ENST00000582252 SLC22A5O76082 557 aa19.54■□□□□ 0.72
CCDC47-204ENST00000582252 CCL2P13500 99 aa19.54■□□□□ 0.72
CCDC47-204ENST00000582252 SNU13P55769 128 aaKnown RBP19.54■□□□□ 0.72
CCDC47-204ENST00000582252 PRDX4Q13162 271 aa19.54■□□□□ 0.72
CCDC47-204ENST00000582252 MRPL49Q13405 166 aaKnown RBP19.54■□□□□ 0.72
CCDC47-204ENST00000582252 TBC1D28Q2M2D7 210 aa19.54■□□□□ 0.72
CCDC47-204ENST00000582252 NKAPLQ5M9Q1 402 aa19.54■□□□□ 0.72
CCDC47-204ENST00000582252 OR2A2Q6IF42 318 aa19.54■□□□□ 0.72
CCDC47-204ENST00000582252 LPCAT3Q6P1A2 487 aa19.54■□□□□ 0.72
CCDC47-204ENST00000582252 TFAP2EQ6VUC0 442 aa19.54■□□□□ 0.72
CCDC47-204ENST00000582252 KDF1Q8NAX2 398 aaPredicted RBP19.54■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms