RNA–Protein interactions for RNA: ENST00000581631.1

SMCHD1-206, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 3

Gene SMCHD1, Length 729 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-206ENST00000581631 CPNE9Q8IYJ1 553 aa0.95□□□□□ -2.26
SMCHD1-206ENST00000581631 ZCCHC24Q8N2G6 241 aaKnown RBP0.95□□□□□ -2.26
SMCHD1-206ENST00000581631 KIF2BQ8N4N8 673 aa0.95□□□□□ -2.26
SMCHD1-206ENST00000581631 ZDHHC22Q8N966 263 aa0.95□□□□□ -2.26
SMCHD1-206ENST00000581631 APH1AQ96BI3 265 aa0.95□□□□□ -2.26
SMCHD1-206ENST00000581631 RCN3Q96D15 328 aa0.95□□□□□ -2.26
SMCHD1-206ENST00000581631 SMARCD1Q96GM5 515 aa0.95□□□□□ -2.26
SMCHD1-206ENST00000581631 PPP1R36Q96LQ0 422 aa0.95□□□□□ -2.26
SMCHD1-206ENST00000581631 Q96MT0 163 aa0.95□□□□□ -2.26
SMCHD1-206ENST00000581631 MYCBPQ99417 103 aaPredicted RBP0.95□□□□□ -2.26
SMCHD1-206ENST00000581631 PLIN2Q99541 437 aa0.95□□□□□ -2.26
SMCHD1-206ENST00000581631 C11orf70Q9BRQ4 267 aa0.95□□□□□ -2.26
SMCHD1-206ENST00000581631 OR2AG1Q9H205 316 aa0.95□□□□□ -2.26
SMCHD1-206ENST00000581631 ELOVL6Q9H5J4 265 aa0.95□□□□□ -2.26
SMCHD1-206ENST00000581631 REEP1Q9H902 201 aa0.95□□□□□ -2.26
SMCHD1-206ENST00000581631 TRAPPC1Q9Y5R8 145 aa0.95□□□□□ -2.26
SMCHD1-206ENST00000581631 VWA8A3KMH1 1905 aa0.95□□□□□ -2.26
SMCHD1-206ENST00000581631 MROH5Q6ZUA9 1318 aa0.94□□□□□ -2.26
SMCHD1-206ENST00000581631 A0A0B4J2C4 111 aa0.94□□□□□ -2.26
SMCHD1-206ENST00000581631 ZNF99A8MXY4 864 aaPredicted RBP0.94□□□□□ -2.26
SMCHD1-206ENST00000581631 PTTG1O95997 202 aa0.94□□□□□ -2.26
SMCHD1-206ENST00000581631 CATP04040 527 aaKnown RBP0.94□□□□□ -2.26
SMCHD1-206ENST00000581631 CDK1P06493 297 aa0.94□□□□□ -2.26
SMCHD1-206ENST00000581631 ZNF83P51522 516 aa0.94□□□□□ -2.26
SMCHD1-206ENST00000581631 TRDNQ13061 729 aa0.94□□□□□ -2.26
SMCHD1-206ENST00000581631 KCTD16Q68DU8 428 aa0.94□□□□□ -2.26
SMCHD1-206ENST00000581631 BZW1Q7L1Q6 419 aaKnown RBP0.94□□□□□ -2.26
SMCHD1-206ENST00000581631 TRAM1L1Q8N609 369 aa0.94□□□□□ -2.26
SMCHD1-206ENST00000581631 C8orf31Q8N9H6 132 aa0.94□□□□□ -2.26
SMCHD1-206ENST00000581631 ORAOV1Q8WV07 137 aa0.94□□□□□ -2.26
SMCHD1-206ENST00000581631 MCUR1Q96AQ8 359 aa0.94□□□□□ -2.26
SMCHD1-206ENST00000581631 ZNF707Q96C28 371 aaPredicted RBP0.94□□□□□ -2.26
SMCHD1-206ENST00000581631 RNF170Q96K19 258 aa0.94□□□□□ -2.26
SMCHD1-206ENST00000581631 AGMATQ9BSE5 352 aa0.94□□□□□ -2.26
SMCHD1-206ENST00000581631 ABCB9Q9NP78 766 aa0.94□□□□□ -2.26
SMCHD1-206ENST00000581631 C20orf96Q9NUD7 363 aaPredicted RBP0.94□□□□□ -2.26
SMCHD1-206ENST00000581631 RAB20Q9NX57 234 aa0.94□□□□□ -2.26
SMCHD1-206ENST00000581631 ZMAT5Q9UDW3 170 aaKnown RBP0.94□□□□□ -2.26
SMCHD1-206ENST00000581631 ZNF443Q9Y2A4 671 aaPredicted RBP0.94□□□□□ -2.26
SMCHD1-206ENST00000581631 GPR98Q8WXG9 6306 aa0.94□□□□□ -2.26
SMCHD1-206ENST00000581631 JCADQ9P266 1359 aa0.94□□□□□ -2.26
SMCHD1-206ENST00000581631 SIGLEC1Q9BZZ2 1709 aa0.93□□□□□ -2.26
SMCHD1-206ENST00000581631 TRAV8-6A0A0B4J262 113 aa0.93□□□□□ -2.26
SMCHD1-206ENST00000581631 TRAV25A0A0B4J276 109 aa0.93□□□□□ -2.26
SMCHD1-206ENST00000581631 ZNF729A6NN14 1252 aaPredicted RBP0.93□□□□□ -2.26
SMCHD1-206ENST00000581631 XRCC2O43543 280 aa0.93□□□□□ -2.26
SMCHD1-206ENST00000581631 CACNG3O60359 315 aa0.93□□□□□ -2.26
SMCHD1-206ENST00000581631 UPK1BO75841 260 aa0.93□□□□□ -2.26
SMCHD1-206ENST00000581631 FGF4P08620 206 aa0.93□□□□□ -2.26
SMCHD1-206ENST00000581631 HLA-GP17693 338 aa0.93□□□□□ -2.26
SMCHD1-206ENST00000581631 GZMHP20718 246 aa0.93□□□□□ -2.26
SMCHD1-206ENST00000581631 NUDT2P50583 147 aa0.93□□□□□ -2.26
SMCHD1-206ENST00000581631 PAFAH1B2P68402 229 aa0.93□□□□□ -2.26
SMCHD1-206ENST00000581631 ENDOGQ14249 297 aaKnown RBP0.93□□□□□ -2.26
SMCHD1-206ENST00000581631 KATNAL2Q8IYT4 538 aa0.93□□□□□ -2.26
SMCHD1-206ENST00000581631 OR8S1Q8NH09 359 aa0.93□□□□□ -2.26
SMCHD1-206ENST00000581631 ITFG1Q8TB96 612 aa0.93□□□□□ -2.26
SMCHD1-206ENST00000581631 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP0.93□□□□□ -2.26
SMCHD1-206ENST00000581631 TRIB3Q96RU7 358 aa0.93□□□□□ -2.26
SMCHD1-206ENST00000581631 GABRG3Q99928 467 aa0.93□□□□□ -2.26
SMCHD1-206ENST00000581631 CHRNA10Q9GZZ6 450 aa0.93□□□□□ -2.26
SMCHD1-206ENST00000581631 STMN4Q9H169 189 aaPredicted RBP0.93□□□□□ -2.26
SMCHD1-206ENST00000581631 MRPS30Q9NP92 439 aaKnown RBP0.93□□□□□ -2.26
SMCHD1-206ENST00000581631 PXMP2Q9NR77 195 aa0.93□□□□□ -2.26
SMCHD1-206ENST00000581631 OR51B2Q9Y5P1 312 aa0.93□□□□□ -2.26
SMCHD1-206ENST00000581631 A0A0B4J2E0 115 aa0.92□□□□□ -2.26
SMCHD1-206ENST00000581631 TRGV4A0A0C4DH28 118 aa0.92□□□□□ -2.26
SMCHD1-206ENST00000581631 WRBO00258 174 aa0.92□□□□□ -2.26
SMCHD1-206ENST00000581631 SLC31A1O15431 190 aa0.92□□□□□ -2.26
SMCHD1-206ENST00000581631 AKR7A2O43488 359 aa0.92□□□□□ -2.26
SMCHD1-206ENST00000581631 MPDU1O75352 247 aa0.92□□□□□ -2.26
SMCHD1-206ENST00000581631 TACSTD2P09758 323 aa0.92□□□□□ -2.26
SMCHD1-206ENST00000581631 NDUFAF7Q7L592 441 aa0.92□□□□□ -2.26
SMCHD1-206ENST00000581631 SSX9Q7RTT3 188 aa0.92□□□□□ -2.26
SMCHD1-206ENST00000581631 PRNTQ86SH4 94 aa0.92□□□□□ -2.26
SMCHD1-206ENST00000581631 AMN1Q8IY45 258 aa0.92□□□□□ -2.26
SMCHD1-206ENST00000581631 RPRMLQ8N4K4 120 aa0.92□□□□□ -2.26
SMCHD1-206ENST00000581631 CYB561A3Q8NBI2 242 aa0.92□□□□□ -2.26
SMCHD1-206ENST00000581631 OR5H2Q8NGV7 314 aa0.92□□□□□ -2.26
SMCHD1-206ENST00000581631 TSEN15Q8WW01 171 aaKnown RBP0.92□□□□□ -2.26
SMCHD1-206ENST00000581631 TNFRSF14Q92956 283 aa0.92□□□□□ -2.26
SMCHD1-206ENST00000581631 PORCNQ9H237 461 aa0.92□□□□□ -2.26
SMCHD1-206ENST00000581631 ARV1Q9H2C2 271 aa0.92□□□□□ -2.26
SMCHD1-206ENST00000581631 C8orf33Q9H7E9 229 aaPredicted RBP0.92□□□□□ -2.26
SMCHD1-206ENST00000581631 AUNIPQ9H7T9 357 aa0.92□□□□□ -2.26
SMCHD1-206ENST00000581631 VAX2Q9UIW0 290 aa0.92□□□□□ -2.26
SMCHD1-206ENST00000581631 RHBDD3Q9Y3P4 386 aa0.92□□□□□ -2.26
SMCHD1-206ENST00000581631 NPHP4O75161 1426 aaPredicted RBP0.91□□□□□ -2.26
SMCHD1-206ENST00000581631 BRCA1P38398 1863 aaKnown RBP0.91□□□□□ -2.26
SMCHD1-206ENST00000581631 LRRIQ4A6NIV6 560 aa0.91□□□□□ -2.26
SMCHD1-206ENST00000581631 SUPT3HB4E1H0 165 aa0.91□□□□□ -2.26
SMCHD1-206ENST00000581631 C9JQL5 133 aa0.91□□□□□ -2.26
SMCHD1-206ENST00000581631 G3V3Q6 166 aa0.91□□□□□ -2.26
SMCHD1-206ENST00000581631 GOLGA8TH3BQL2 631 aa0.91□□□□□ -2.26
SMCHD1-206ENST00000581631 FFAR1O14842 300 aa0.91□□□□□ -2.26
SMCHD1-206ENST00000581631 OR4Q2P0C623 313 aa0.91□□□□□ -2.26
SMCHD1-206ENST00000581631 ARL14EPLP0DKL9 152 aa0.91□□□□□ -2.26
SMCHD1-206ENST00000581631 ANXA8P13928 327 aa0.91□□□□□ -2.26
SMCHD1-206ENST00000581631 GALP22466 123 aa0.91□□□□□ -2.26
SMCHD1-206ENST00000581631 PAX6P26367 422 aa0.91□□□□□ -2.26
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms