RNA–Protein interactions for RNA: ENST00000581598.1

CCDC42-203, Transcript of coiled-coil domain containing 42, humanhuman

TSL 4

Gene CCDC42, Length 538 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC42-203ENST00000581598 ACOXLQ9NUZ1 547 aa17.27■□□□□ 0.36
CCDC42-203ENST00000581598 ERVK13-1Q9NX77 482 aa17.27■□□□□ 0.36
CCDC42-203ENST00000581598 A0A1B0GUS0 222 aa17.26■□□□□ 0.35
CCDC42-203ENST00000581598 TRIM64CA6NLI5 447 aa17.26■□□□□ 0.35
CCDC42-203ENST00000581598 ZNF670-ZNF695F2Z2N8 137 aa17.26■□□□□ 0.35
CCDC42-203ENST00000581598 MELTFP08582 738 aa17.26■□□□□ 0.35
CCDC42-203ENST00000581598 TGM4P49221 684 aa17.26■□□□□ 0.35
CCDC42-203ENST00000581598 RPL15P61313 204 aaKnown RBP17.26■□□□□ 0.35
CCDC42-203ENST00000581598 ARF6P62330 175 aa17.26■□□□□ 0.35
CCDC42-203ENST00000581598 GALEQ14376 348 aa17.26■□□□□ 0.35
CCDC42-203ENST00000581598 CDONQ4KMG0 1287 aa17.26■□□□□ 0.35
CCDC42-203ENST00000581598 STUMQ69YW2 141 aa17.26■□□□□ 0.35
CCDC42-203ENST00000581598 SSX6Q7RTT6 188 aa17.26■□□□□ 0.35
CCDC42-203ENST00000581598 OR8B12Q8NGG6 310 aa17.26■□□□□ 0.35
CCDC42-203ENST00000581598 ASB17Q8WXJ9 295 aa17.26■□□□□ 0.35
CCDC42-203ENST00000581598 ST8SIA4Q92187 359 aa17.26■□□□□ 0.35
CCDC42-203ENST00000581598 TBX5Q99593 518 aa17.26■□□□□ 0.35
CCDC42-203ENST00000581598 CCL13Q99616 98 aa17.26■□□□□ 0.35
CCDC42-203ENST00000581598 LAMP5Q9UJQ1 280 aa17.26■□□□□ 0.35
CCDC42-203ENST00000581598 LRP12Q9Y561 859 aa17.26■□□□□ 0.35
CCDC42-203ENST00000581598 A0A0U1RQV5 110 aa17.25■□□□□ 0.35
CCDC42-203ENST00000581598 A0A1B0GW55 424 aa17.25■□□□□ 0.35
CCDC42-203ENST00000581598 DAPL1A0PJW8 107 aa17.25■□□□□ 0.35
CCDC42-203ENST00000581598 MAGEA13PA6NCF6 341 aa17.25■□□□□ 0.35
CCDC42-203ENST00000581598 ZNF850A8MQ14 1090 aa17.25■□□□□ 0.35
CCDC42-203ENST00000581598 PRR32B1ATL7 298 aa17.25■□□□□ 0.35
CCDC42-203ENST00000581598 DUX4L2P0CJ85 424 aa17.25■□□□□ 0.35
CCDC42-203ENST00000581598 DUX4L3P0CJ86 424 aa17.25■□□□□ 0.35
CCDC42-203ENST00000581598 DUX4L4P0CJ87 422 aa17.25■□□□□ 0.35
CCDC42-203ENST00000581598 DUX4L5P0CJ88 424 aa17.25■□□□□ 0.35
CCDC42-203ENST00000581598 DUX4L6P0CJ89 424 aa17.25■□□□□ 0.35
CCDC42-203ENST00000581598 DUX4L7P0CJ90 424 aa17.25■□□□□ 0.35
CCDC42-203ENST00000581598 MYL12AP19105 171 aa17.25■□□□□ 0.35
CCDC42-203ENST00000581598 AMY2BP19961 511 aa17.25■□□□□ 0.35
CCDC42-203ENST00000581598 DCTDP32321 178 aa17.25■□□□□ 0.35
CCDC42-203ENST00000581598 ETV1P50549 477 aa17.25■□□□□ 0.35
CCDC42-203ENST00000581598 ZNF684Q5T5D7 378 aa17.25■□□□□ 0.35
CCDC42-203ENST00000581598 KCTD18Q6PI47 426 aaPredicted RBP17.25■□□□□ 0.35
CCDC42-203ENST00000581598 DUX4L9Q6RFH8 374 aaPredicted RBP17.25■□□□□ 0.35
CCDC42-203ENST00000581598 METAP1DQ6UB28 335 aaPredicted RBP17.25■□□□□ 0.35
CCDC42-203ENST00000581598 KRT77Q7Z794 578 aa17.25■□□□□ 0.35
CCDC42-203ENST00000581598 TSPAN14Q8NG11 270 aa17.25■□□□□ 0.35
CCDC42-203ENST00000581598 C8orf46Q8TAG6 207 aa17.25■□□□□ 0.35
CCDC42-203ENST00000581598 DUX4Q9UBX2 424 aa17.25■□□□□ 0.35
CCDC42-203ENST00000581598 A0A1B0GVI7 797 aa17.24■□□□□ 0.35
CCDC42-203ENST00000581598 FAM181BA6NEQ2 426 aa17.24■□□□□ 0.35
CCDC42-203ENST00000581598 NDUFB3O43676 98 aa17.24■□□□□ 0.35
CCDC42-203ENST00000581598 SMIM18P0DKX4 95 aa17.24■□□□□ 0.35
CCDC42-203ENST00000581598 ATP6V1B1P15313 513 aa17.24■□□□□ 0.35
CCDC42-203ENST00000581598 MDKP21741 143 aaPredicted RBP17.24■□□□□ 0.35
CCDC42-203ENST00000581598 ROM1Q03395 351 aa17.24■□□□□ 0.35
CCDC42-203ENST00000581598 EGR3Q06889 387 aa17.24■□□□□ 0.35
CCDC42-203ENST00000581598 TBCEQ15813 527 aaPredicted RBP17.24■□□□□ 0.35
CCDC42-203ENST00000581598 ZNF322Q6U7Q0 402 aaPredicted RBP17.24■□□□□ 0.35
CCDC42-203ENST00000581598 LHFPL3Q86UP9 236 aa17.24■□□□□ 0.35
CCDC42-203ENST00000581598 EGFL6Q8IUX8 553 aa17.24■□□□□ 0.35
CCDC42-203ENST00000581598 ZDHHC23Q8IYP9 409 aa17.24■□□□□ 0.35
CCDC42-203ENST00000581598 SPARTQ8N0X7 666 aa17.24■□□□□ 0.35
CCDC42-203ENST00000581598 KIR3DL3Q8N743 410 aa17.24■□□□□ 0.35
CCDC42-203ENST00000581598 FAM216BQ8N7L0 139 aa17.24■□□□□ 0.35
CCDC42-203ENST00000581598 SCCPDHQ8NBX0 429 aa17.24■□□□□ 0.35
CCDC42-203ENST00000581598 SSMEM1Q8WWF3 244 aa17.24■□□□□ 0.35
CCDC42-203ENST00000581598 HPSE2Q8WWQ2 592 aa17.24■□□□□ 0.35
CCDC42-203ENST00000581598 PIGCQ92535 297 aa17.24■□□□□ 0.35
CCDC42-203ENST00000581598 LHX4Q969G2 390 aa17.24■□□□□ 0.35
CCDC42-203ENST00000581598 SEH1LQ96EE3 360 aa17.24■□□□□ 0.35
CCDC42-203ENST00000581598 OR8B4Q96RC9 309 aa17.24■□□□□ 0.35
CCDC42-203ENST00000581598 ALG8Q9BVK2 526 aa17.24■□□□□ 0.35
CCDC42-203ENST00000581598 FGF23Q9GZV9 251 aaPredicted RBP17.24■□□□□ 0.35
CCDC42-203ENST00000581598 CLEC2DQ9UHP7 191 aa17.24■□□□□ 0.35
CCDC42-203ENST00000581598 A0A087WXM4 84 aa17.23■□□□□ 0.35
CCDC42-203ENST00000581598 NDUFA7O95182 113 aa17.23■□□□□ 0.35
CCDC42-203ENST00000581598 RPSAP08865 295 aaKnown RBP17.23■□□□□ 0.35
CCDC42-203ENST00000581598 MAP2K3P46734 347 aa17.23■□□□□ 0.35
CCDC42-203ENST00000581598 LRRC10Q5BKY1 277 aa17.23■□□□□ 0.35
CCDC42-203ENST00000581598 ZNF788Q6ZQV5 615 aa17.23■□□□□ 0.35
CCDC42-203ENST00000581598 LDLRAD3Q86YD5 345 aa17.23■□□□□ 0.35
CCDC42-203ENST00000581598 FGFRL1Q8N441 504 aa17.23■□□□□ 0.35
CCDC42-203ENST00000581598 ZNF485Q8NCK3 441 aa17.23■□□□□ 0.35
CCDC42-203ENST00000581598 OR52N1Q8NH53 320 aa17.23■□□□□ 0.35
CCDC42-203ENST00000581598 RPL3LQ92901 407 aaKnown RBP17.23■□□□□ 0.35
CCDC42-203ENST00000581598 RNF170Q96K19 258 aa17.23■□□□□ 0.35
CCDC42-203ENST00000581598 MYCBPQ99417 103 aaPredicted RBP17.23■□□□□ 0.35
CCDC42-203ENST00000581598 DCTN5Q9BTE1 182 aa17.23■□□□□ 0.35
CCDC42-203ENST00000581598 CHIAQ9BZP6 476 aa17.23■□□□□ 0.35
CCDC42-203ENST00000581598 CCDC90BQ9GZT6 254 aa17.23■□□□□ 0.35
CCDC42-203ENST00000581598 FAM206AQ9NX38 181 aa17.23■□□□□ 0.35
CCDC42-203ENST00000581598 CAB39Q9Y376 341 aaPredicted RBP17.23■□□□□ 0.35
CCDC42-203ENST00000581598 ZNF816-ZNF321PA0A0X1KG74 233 aa17.22■□□□□ 0.35
CCDC42-203ENST00000581598 ZNF254O75437 659 aa17.22■□□□□ 0.35
CCDC42-203ENST00000581598 SULT1C4O75897 302 aa17.22■□□□□ 0.35
CCDC42-203ENST00000581598 IGLV3-1P01715 115 aa17.22■□□□□ 0.35
CCDC42-203ENST00000581598 CRYBA1P05813 215 aa17.22■□□□□ 0.35
CCDC42-203ENST00000581598 ACTA2P62736 377 aa17.22■□□□□ 0.35
CCDC42-203ENST00000581598 ACTG2P63267 376 aa17.22■□□□□ 0.35
CCDC42-203ENST00000581598 FIP1L1Q6UN15 594 aaKnown RBP17.22■□□□□ 0.35
CCDC42-203ENST00000581598 VMO1Q7Z5L0 202 aa17.22■□□□□ 0.35
CCDC42-203ENST00000581598 CMTM4Q8IZR5 234 aa17.22■□□□□ 0.35
CCDC42-203ENST00000581598 SYS1Q8N2H4 156 aa17.22■□□□□ 0.35
CCDC42-203ENST00000581598 SVOPQ8N4V2 548 aa17.22■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms