RNA–Protein interactions for RNA: ENST00000581570.5

SS18-219, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 5

Gene SS18, Length 571 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-219ENST00000581570 TENM2Q9NT68 2774 aa10.15□□□□□ -0.78
SS18-219ENST00000581570 SLC22A2O15244 555 aa10.15□□□□□ -0.78
SS18-219ENST00000581570 RAMP3O60896 148 aa10.15□□□□□ -0.78
SS18-219ENST00000581570 TK1P04183 234 aa10.15□□□□□ -0.78
SS18-219ENST00000581570 H2BFMP0C1H6 154 aa10.15□□□□□ -0.78
SS18-219ENST00000581570 ZNF728P0DKX0 622 aa10.15□□□□□ -0.78
SS18-219ENST00000581570 IGHV1-8P0DP01 117 aa10.15□□□□□ -0.78
SS18-219ENST00000581570 CLUP10909 449 aa10.15□□□□□ -0.78
SS18-219ENST00000581570 SPI1P17947 270 aa10.15□□□□□ -0.78
SS18-219ENST00000581570 OPRL1P41146 370 aa10.15□□□□□ -0.78
SS18-219ENST00000581570 BLVRAP53004 296 aa10.15□□□□□ -0.78
SS18-219ENST00000581570 CRMP1Q14194 572 aa10.15□□□□□ -0.78
SS18-219ENST00000581570 CEACAM21Q3KPI0 293 aa10.15□□□□□ -0.78
SS18-219ENST00000581570 RPL13AP3Q6NVV1 102 aa10.15□□□□□ -0.78
SS18-219ENST00000581570 HIST2H2ABQ8IUE6 130 aaPredicted RBP10.15□□□□□ -0.78
SS18-219ENST00000581570 POC1AQ8NBT0 407 aa10.15□□□□□ -0.78
SS18-219ENST00000581570 OR5A2Q8NGI9 324 aa10.15□□□□□ -0.78
SS18-219ENST00000581570 OR6N2Q8NGY6 317 aa10.15□□□□□ -0.78
SS18-219ENST00000581570 ZNF488Q96MN9 340 aa10.15□□□□□ -0.78
SS18-219ENST00000581570 HOPXQ9BPY8 73 aaPredicted RBP10.15□□□□□ -0.78
SS18-219ENST00000581570 KCTD14Q9BQ13 255 aaPredicted RBP10.15□□□□□ -0.78
SS18-219ENST00000581570 LIN7BQ9HAP6 207 aa10.15□□□□□ -0.78
SS18-219ENST00000581570 GAR1Q9NY12 217 aaKnown RBP10.15□□□□□ -0.78
SS18-219ENST00000581570 SAMD4AQ9UPU9 718 aaKnown RBP10.15□□□□□ -0.78
SS18-219ENST00000581570 CDH10Q9Y6N8 788 aa10.15□□□□□ -0.78
SS18-219ENST00000581570 MEX3AA1L020 520 aaKnown RBP10.14□□□□□ -0.79
SS18-219ENST00000581570 RBP4P02753 201 aa10.14□□□□□ -0.79
SS18-219ENST00000581570 CD24P25063 80 aa10.14□□□□□ -0.79
SS18-219ENST00000581570 MYCNOSP40205 109 aa10.14□□□□□ -0.79
SS18-219ENST00000581570 NUDT2P50583 147 aa10.14□□□□□ -0.79
SS18-219ENST00000581570 ACTA2P62736 377 aa10.14□□□□□ -0.79
SS18-219ENST00000581570 ACTG2P63267 376 aa10.14□□□□□ -0.79
SS18-219ENST00000581570 ACTC1P68032 377 aa10.14□□□□□ -0.79
SS18-219ENST00000581570 ACTA1P68133 377 aa10.14□□□□□ -0.79
SS18-219ENST00000581570 SF3A3Q12874 501 aaKnown RBP eCLIP10.14□□□□□ -0.79
SS18-219ENST00000581570 GLYATQ6IB77 296 aa10.14□□□□□ -0.79
SS18-219ENST00000581570 MOB3CQ70IA8 216 aa10.14□□□□□ -0.79
SS18-219ENST00000581570 ERI1Q8IV48 349 aaKnown RBP10.14□□□□□ -0.79
SS18-219ENST00000581570 FAM81AQ8TBF8 368 aa10.14□□□□□ -0.79
SS18-219ENST00000581570 STMN2Q93045 179 aa10.14□□□□□ -0.79
SS18-219ENST00000581570 OR8B4Q96RC9 309 aa10.14□□□□□ -0.79
SS18-219ENST00000581570 INTS14Q96SY0 518 aa10.14□□□□□ -0.79
SS18-219ENST00000581570 AMELYQ99218 206 aa10.14□□□□□ -0.79
SS18-219ENST00000581570 NMNAT2Q9BZQ4 307 aa10.14□□□□□ -0.79
SS18-219ENST00000581570 VIPAS39Q9H9C1 493 aa10.14□□□□□ -0.79
SS18-219ENST00000581570 DCAF13Q9NV06 445 aaKnown RBP10.14□□□□□ -0.79
SS18-219ENST00000581570 OR14J1Q9UGF5 321 aa10.14□□□□□ -0.79
SS18-219ENST00000581570 LCE6AA0A183 80 aa10.13□□□□□ -0.79
SS18-219ENST00000581570 SH2D7A6NKC9 451 aaPredicted RBP10.13□□□□□ -0.79
SS18-219ENST00000581570 OR5B21A6NL26 309 aa10.13□□□□□ -0.79
SS18-219ENST00000581570 MAP2K3P46734 347 aa10.13□□□□□ -0.79
SS18-219ENST00000581570 IL18R1Q13478 541 aa10.13□□□□□ -0.79
SS18-219ENST00000581570 C9orf152Q5JTZ5 239 aa10.13□□□□□ -0.79
SS18-219ENST00000581570 LINC01590Q5TEZ4 76 aa10.13□□□□□ -0.79
SS18-219ENST00000581570 KCTD18Q6PI47 426 aaPredicted RBP10.13□□□□□ -0.79
SS18-219ENST00000581570 SHFQ7M4L6 423 aa10.13□□□□□ -0.79
SS18-219ENST00000581570 KRT74Q7RTS7 529 aa10.13□□□□□ -0.79
SS18-219ENST00000581570 OSR2Q8N2R0 312 aa10.13□□□□□ -0.79
SS18-219ENST00000581570 OR8D4Q8NGM9 314 aa10.13□□□□□ -0.79
SS18-219ENST00000581570 PRR25Q96S07 402 aa10.13□□□□□ -0.79
SS18-219ENST00000581570 SLC25A33Q9BSK2 321 aa10.13□□□□□ -0.79
SS18-219ENST00000581570 TBC1D23Q9NUY8 699 aa10.13□□□□□ -0.79
SS18-219ENST00000581570 VNN3Q9NY84 501 aa10.13□□□□□ -0.79
SS18-219ENST00000581570 IL20Q9NYY1 176 aa10.13□□□□□ -0.79
SS18-219ENST00000581570 V9GYQ6 96 aa10.13□□□□□ -0.79
SS18-219ENST00000581570 PSMB11A5LHX3 300 aa10.12□□□□□ -0.79
SS18-219ENST00000581570 K7N7A8 449 aa10.12□□□□□ -0.79
SS18-219ENST00000581570 NDUFAB1O14561 156 aa10.12□□□□□ -0.79
SS18-219ENST00000581570 NXPH2O95156 264 aa10.12□□□□□ -0.79
SS18-219ENST00000581570 PGA5P0DJD9 388 aa10.12□□□□□ -0.79
SS18-219ENST00000581570 GSTT1P30711 240 aa10.12□□□□□ -0.79
SS18-219ENST00000581570 RRM2P31350 389 aa10.12□□□□□ -0.79
SS18-219ENST00000581570 BRS3P32247 399 aa10.12□□□□□ -0.79
SS18-219ENST00000581570 EDDM3BP56851 147 aa10.12□□□□□ -0.79
SS18-219ENST00000581570 RPL23AP62750 156 aaKnown RBP10.12□□□□□ -0.79
SS18-219ENST00000581570 C18orf65Q6ZTR6 163 aa10.12□□□□□ -0.79
SS18-219ENST00000581570 C8orf86Q6ZUL3 223 aa10.12□□□□□ -0.79
SS18-219ENST00000581570 Q8NFD4 153 aa10.12□□□□□ -0.79
SS18-219ENST00000581570 OR8B12Q8NGG6 310 aa10.12□□□□□ -0.79
SS18-219ENST00000581570 RP9Q8TA86 221 aaKnown RBP10.12□□□□□ -0.79
SS18-219ENST00000581570 BCAS4Q8TDM0 211 aa10.12□□□□□ -0.79
SS18-219ENST00000581570 PYURFQ96I23 114 aa10.12□□□□□ -0.79
SS18-219ENST00000581570 ZNF714Q96N38 554 aa10.12□□□□□ -0.79
SS18-219ENST00000581570 TSSK6Q9BXA6 273 aa10.12□□□□□ -0.79
SS18-219ENST00000581570 IGHV2-26A0A0B4J1V2 119 aa10.11□□□□□ -0.79
SS18-219ENST00000581570 NUDT19A8MXV4 375 aa10.11□□□□□ -0.79
SS18-219ENST00000581570 NOS1APO75052 506 aaPredicted RBP10.11□□□□□ -0.79
SS18-219ENST00000581570 GMNNO75496 209 aa10.11□□□□□ -0.79
SS18-219ENST00000581570 OR2F2O95006 317 aa10.11□□□□□ -0.79
SS18-219ENST00000581570 LYL1P12980 280 aa10.11□□□□□ -0.79
SS18-219ENST00000581570 HTR1DP28221 377 aa10.11□□□□□ -0.79
SS18-219ENST00000581570 HAAOP46952 286 aa10.11□□□□□ -0.79
SS18-219ENST00000581570 PLCXD3Q63HM9 321 aa10.11□□□□□ -0.79
SS18-219ENST00000581570 C8orf82Q6P1X6 216 aaPredicted RBP10.11□□□□□ -0.79
SS18-219ENST00000581570 RASSF6Q6ZTQ3 369 aa10.11□□□□□ -0.79
SS18-219ENST00000581570 OR2W3Q7Z3T1 314 aa10.11□□□□□ -0.79
SS18-219ENST00000581570 ZNF329Q86UD4 541 aa10.11□□□□□ -0.79
SS18-219ENST00000581570 BATF2Q8N1L9 274 aa10.11□□□□□ -0.79
SS18-219ENST00000581570 ZNF676Q8N7Q3 588 aa10.11□□□□□ -0.79
SS18-219ENST00000581570 ASCC1Q8N9N2 400 aaKnown RBP10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms