RNA–Protein interactions for RNA: ENST00000581383.1

SMCHD1-205, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 3

Gene SMCHD1, Length 806 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-205ENST00000581383 RNASE2P10153 161 aaKnown RBP2.45□□□□□ -2.02
SMCHD1-205ENST00000581383 IDH2P48735 452 aaKnown RBP2.45□□□□□ -2.02
SMCHD1-205ENST00000581383 PSMB2P49721 201 aa2.45□□□□□ -2.02
SMCHD1-205ENST00000581383 LAMTOR4Q0VGL1 99 aa2.45□□□□□ -2.02
SMCHD1-205ENST00000581383 MAPRE2Q15555 327 aa2.45□□□□□ -2.02
SMCHD1-205ENST00000581383 TTC32Q5I0X7 151 aa2.45□□□□□ -2.02
SMCHD1-205ENST00000581383 MORN3Q6PF18 240 aaPredicted RBP2.45□□□□□ -2.02
SMCHD1-205ENST00000581383 TBPL2Q6SJ96 375 aa2.45□□□□□ -2.02
SMCHD1-205ENST00000581383 C16orf47Q6ZP98 133 aaPredicted RBP2.45□□□□□ -2.02
SMCHD1-205ENST00000581383 OR1P1Q8NH06 330 aa2.45□□□□□ -2.02
SMCHD1-205ENST00000581383 OR52N1Q8NH53 320 aa2.45□□□□□ -2.02
SMCHD1-205ENST00000581383 ZNF420Q8TAQ5 688 aaPredicted RBP2.45□□□□□ -2.02
SMCHD1-205ENST00000581383 ZFAND1Q8TCF1 268 aa2.45□□□□□ -2.02
SMCHD1-205ENST00000581383 MITD1Q8WV92 249 aa2.45□□□□□ -2.02
SMCHD1-205ENST00000581383 UTP23Q9BRU9 249 aaKnown RBP2.45□□□□□ -2.02
SMCHD1-205ENST00000581383 C1orf50Q9BV19 199 aa2.45□□□□□ -2.02
SMCHD1-205ENST00000581383 MS4A8Q9BY19 250 aa2.45□□□□□ -2.02
SMCHD1-205ENST00000581383 IL37Q9NZH6 218 aa2.45□□□□□ -2.02
SMCHD1-205ENST00000581383 RAB23Q9ULC3 237 aa2.45□□□□□ -2.02
SMCHD1-205ENST00000581383 ORC6Q9Y5N6 252 aa2.45□□□□□ -2.02
SMCHD1-205ENST00000581383 V9GYY9 64 aa2.45□□□□□ -2.02
SMCHD1-205ENST00000581383 TMEM131Q92545 1883 aa2.45□□□□□ -2.02
SMCHD1-205ENST00000581383 THADAQ6YHU6 1953 aa2.45□□□□□ -2.02
SMCHD1-205ENST00000581383 TRAV8-7A0A075B6U6 113 aa2.44□□□□□ -2.02
SMCHD1-205ENST00000581383 ANKRD20A5PA0PJZ0 165 aa2.44□□□□□ -2.02
SMCHD1-205ENST00000581383 TVP23AA6NH52 213 aa2.44□□□□□ -2.02
SMCHD1-205ENST00000581383 RFXANKO14593 260 aa2.44□□□□□ -2.02
SMCHD1-205ENST00000581383 OR5AL1P0C617 328 aa2.44□□□□□ -2.02
SMCHD1-205ENST00000581383 LIPCP11150 499 aa2.44□□□□□ -2.02
SMCHD1-205ENST00000581383 HTR2CP28335 458 aa2.44□□□□□ -2.02
SMCHD1-205ENST00000581383 FAM53BQ14153 422 aa2.44□□□□□ -2.02
SMCHD1-205ENST00000581383 TAL2Q16559 108 aa2.44□□□□□ -2.02
SMCHD1-205ENST00000581383 FBXL19-AS1Q494R0 122 aa2.44□□□□□ -2.02
SMCHD1-205ENST00000581383 ZNF678Q5SXM1 525 aa2.44□□□□□ -2.02
SMCHD1-205ENST00000581383 SLC25A25Q6KCM7 469 aa2.44□□□□□ -2.02
SMCHD1-205ENST00000581383 KRTAP5-7Q6L8G8 165 aa2.44□□□□□ -2.02
SMCHD1-205ENST00000581383 C16orf87Q6PH81 154 aa2.44□□□□□ -2.02
SMCHD1-205ENST00000581383 SGPP2Q8IWX5 399 aa2.44□□□□□ -2.02
SMCHD1-205ENST00000581383 CACNG8Q8WXS5 425 aa2.44□□□□□ -2.02
SMCHD1-205ENST00000581383 YIPF6Q96EC8 236 aa2.44□□□□□ -2.02
SMCHD1-205ENST00000581383 DERL3Q96Q80 235 aa2.44□□□□□ -2.02
SMCHD1-205ENST00000581383 PDCD1LG2Q9BQ51 273 aa2.44□□□□□ -2.02
SMCHD1-205ENST00000581383 TMED9Q9BVK6 235 aa2.44□□□□□ -2.02
SMCHD1-205ENST00000581383 MAP1LC3CQ9BXW4 147 aa2.44□□□□□ -2.02
SMCHD1-205ENST00000581383 TM6SF2Q9BZW4 377 aa2.44□□□□□ -2.02
SMCHD1-205ENST00000581383 PORCNQ9H237 461 aa2.44□□□□□ -2.02
SMCHD1-205ENST00000581383 ANKHQ9HCJ1 492 aa2.44□□□□□ -2.02
SMCHD1-205ENST00000581383 ELP1O95163 1332 aa2.43□□□□□ -2.02
SMCHD1-205ENST00000581383 NESP48681 1621 aa2.43□□□□□ -2.02
SMCHD1-205ENST00000581383 CLDN34H7C241 214 aa2.43□□□□□ -2.02
SMCHD1-205ENST00000581383 K7EN84 100 aa2.43□□□□□ -2.02
SMCHD1-205ENST00000581383 ALOX12BO75342 701 aa2.43□□□□□ -2.02
SMCHD1-205ENST00000581383 HLA-GP17693 338 aa2.43□□□□□ -2.02
SMCHD1-205ENST00000581383 MPIP34949 423 aa2.43□□□□□ -2.02
SMCHD1-205ENST00000581383 ARR3P36575 388 aa2.43□□□□□ -2.02
SMCHD1-205ENST00000581383 RGS6P49758 472 aa2.43□□□□□ -2.02
SMCHD1-205ENST00000581383 ATP5J2P56134 94 aa2.43□□□□□ -2.02
SMCHD1-205ENST00000581383 IL5RAQ01344 420 aa2.43□□□□□ -2.02
SMCHD1-205ENST00000581383 DYNC1I2Q13409 638 aaKnown RBP2.43□□□□□ -2.02
SMCHD1-205ENST00000581383 PMVKQ15126 192 aa2.43□□□□□ -2.02
SMCHD1-205ENST00000581383 CDNFQ49AH0 187 aa2.43□□□□□ -2.02
SMCHD1-205ENST00000581383 DAZ4Q86SG3 579 aaKnown RBP2.43□□□□□ -2.02
SMCHD1-205ENST00000581383 ITPRIPQ8IWB1 547 aa2.43□□□□□ -2.02
SMCHD1-205ENST00000581383 FAM58AQ8N1B3 248 aa2.43□□□□□ -2.02
SMCHD1-205ENST00000581383 RNF10Q8N5U6 811 aaKnown RBP2.43□□□□□ -2.02
SMCHD1-205ENST00000581383 OR13C9Q8NGT0 318 aa2.43□□□□□ -2.02
SMCHD1-205ENST00000581383 PHF10Q8WUB8 498 aaKnown RBP2.43□□□□□ -2.02
SMCHD1-205ENST00000581383 ORAOV1Q8WV07 137 aa2.43□□□□□ -2.02
SMCHD1-205ENST00000581383 BEX2Q9BXY8 128 aa2.43□□□□□ -2.02
SMCHD1-205ENST00000581383 MRPL20Q9BYC9 149 aaKnown RBP2.43□□□□□ -2.02
SMCHD1-205ENST00000581383 COA1Q9GZY4 146 aa2.43□□□□□ -2.02
SMCHD1-205ENST00000581383 SND1-IT1Q9HBX3 110 aa2.43□□□□□ -2.02
SMCHD1-205ENST00000581383 DAZ1Q9NQZ3 744 aaKnown RBP2.43□□□□□ -2.02
SMCHD1-205ENST00000581383 ERCC6Q03468 1493 aa2.43□□□□□ -2.02
SMCHD1-205ENST00000581383 SEC16AO15027 2179 aa2.43□□□□□ -2.02
SMCHD1-205ENST00000581383 TRIOBPQ9H2D6 2365 aa2.43□□□□□ -2.02
SMCHD1-205ENST00000581383 SETD1AO15047 1707 aaKnown RBP2.42□□□□□ -2.02
SMCHD1-205ENST00000581383 AK9Q5TCS8 1911 aa2.42□□□□□ -2.02
SMCHD1-205ENST00000581383 SMARCA2P51531 1590 aa2.42□□□□□ -2.02
SMCHD1-205ENST00000581383 RPRD2Q5VT52 1461 aaKnown RBP2.42□□□□□ -2.02
SMCHD1-205ENST00000581383 ZNF233A6NK53 670 aa2.42□□□□□ -2.02
SMCHD1-205ENST00000581383 GATCO43716 136 aaKnown RBP2.42□□□□□ -2.02
SMCHD1-205ENST00000581383 DHRS3O75911 302 aa2.42□□□□□ -2.02
SMCHD1-205ENST00000581383 IGKV1D-16P01601 117 aa2.42□□□□□ -2.02
SMCHD1-205ENST00000581383 IGLV7-43P04211 117 aa2.42□□□□□ -2.02
SMCHD1-205ENST00000581383 OR4Q2P0C623 313 aa2.42□□□□□ -2.02
SMCHD1-205ENST00000581383 SEC11BP0C7V7 166 aa2.42□□□□□ -2.02
SMCHD1-205ENST00000581383 IL15RAQ13261 267 aa2.42□□□□□ -2.02
SMCHD1-205ENST00000581383 TMEM136Q6ZRR5 245 aa2.42□□□□□ -2.02
SMCHD1-205ENST00000581383 SETD3Q86TU7 594 aaPredicted RBP2.42□□□□□ -2.02
SMCHD1-205ENST00000581383 LRRC8AQ8IWT6 810 aa2.42□□□□□ -2.02
SMCHD1-205ENST00000581383 ZNF680Q8NEM1 530 aa2.42□□□□□ -2.02
SMCHD1-205ENST00000581383 SLC26A10Q8NG04 563 aa2.42□□□□□ -2.02
SMCHD1-205ENST00000581383 OR4K2Q8NGD2 314 aa2.42□□□□□ -2.02
SMCHD1-205ENST00000581383 FAM57AQ8TBR7 257 aa2.42□□□□□ -2.02
SMCHD1-205ENST00000581383 NT5CQ8TCD5 201 aa2.42□□□□□ -2.02
SMCHD1-205ENST00000581383 METTL26Q96S19 204 aa2.42□□□□□ -2.02
SMCHD1-205ENST00000581383 SEC22CQ9BRL7 303 aa2.42□□□□□ -2.02
SMCHD1-205ENST00000581383 LHX5Q9H2C1 402 aa2.42□□□□□ -2.02
SMCHD1-205ENST00000581383 PRO0628Q9UI54 55 aa2.42□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms