RNA–Protein interactions for RNA: ENST00000581226.1

SMCHD1-204, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 3

Gene SMCHD1, Length 459 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-204ENST00000581226 APOBEC3HQ6NTF7 200 aaKnown RBP1.98□□□□□ -2.09
SMCHD1-204ENST00000581226 MORN3Q6PF18 240 aaPredicted RBP1.98□□□□□ -2.09
SMCHD1-204ENST00000581226 ZCCHC24Q8N2G6 241 aaKnown RBP1.98□□□□□ -2.09
SMCHD1-204ENST00000581226 MS4A8Q9BY19 250 aa1.98□□□□□ -2.09
SMCHD1-204ENST00000581226 TBL1XR1Q9BZK7 514 aa1.98□□□□□ -2.09
SMCHD1-204ENST00000581226 TRIM45Q9H8W5 580 aaPredicted RBP1.98□□□□□ -2.09
SMCHD1-204ENST00000581226 CA10Q9NS85 328 aa1.98□□□□□ -2.09
SMCHD1-204ENST00000581226 NDRG2Q9UN36 371 aaKnown RBP1.98□□□□□ -2.09
SMCHD1-204ENST00000581226 NLRC5Q86WI3 1866 aa1.98□□□□□ -2.09
SMCHD1-204ENST00000581226 SBNO1A3KN83 1393 aa1.98□□□□□ -2.09
SMCHD1-204ENST00000581226 MIA3Q5JRA6 1907 aa1.97□□□□□ -2.09
SMCHD1-204ENST00000581226 PLXNB3Q9ULL4 1909 aa1.97□□□□□ -2.09
SMCHD1-204ENST00000581226 A0A0J9YYE9 177 aa1.97□□□□□ -2.09
SMCHD1-204ENST00000581226 GOLGA6L4A6NEF3 574 aa1.97□□□□□ -2.09
SMCHD1-204ENST00000581226 TRAPPC6AO75865 159 aa1.97□□□□□ -2.09
SMCHD1-204ENST00000581226 SMC2O95347 1197 aa1.97□□□□□ -2.09
SMCHD1-204ENST00000581226 CSTAP01040 98 aa1.97□□□□□ -2.09
SMCHD1-204ENST00000581226 IGHV1-46P01743 117 aa1.97□□□□□ -2.09
SMCHD1-204ENST00000581226 TRBC1P01850 177 aa1.97□□□□□ -2.09
SMCHD1-204ENST00000581226 MBP02144 154 aa1.97□□□□□ -2.09
SMCHD1-204ENST00000581226 GNRHRP30968 328 aa1.97□□□□□ -2.09
SMCHD1-204ENST00000581226 MLIPQ5VWP3 458 aa1.97□□□□□ -2.09
SMCHD1-204ENST00000581226 NDUFAF7Q7L592 441 aa1.97□□□□□ -2.09
SMCHD1-204ENST00000581226 TMEM234Q8WY98 164 aa1.97□□□□□ -2.09
SMCHD1-204ENST00000581226 MRPL48Q96GC5 212 aaKnown RBP1.97□□□□□ -2.09
SMCHD1-204ENST00000581226 NAPGQ99747 312 aaPredicted RBP1.97□□□□□ -2.09
SMCHD1-204ENST00000581226 ARV1Q9H2C2 271 aa1.97□□□□□ -2.09
SMCHD1-204ENST00000581226 ZNF302Q9NR11 478 aa1.97□□□□□ -2.09
SMCHD1-204ENST00000581226 TMEM100Q9NV29 134 aa1.97□□□□□ -2.09
SMCHD1-204ENST00000581226 MMACHCQ9Y4U1 282 aa1.97□□□□□ -2.09
SMCHD1-204ENST00000581226 R4GN34 69 aa1.97□□□□□ -2.09
SMCHD1-204ENST00000581226 A0A1W2PRF3 423 aa1.96□□□□□ -2.1
SMCHD1-204ENST00000581226 A0A1W2PRM7 423 aa1.96□□□□□ -2.1
SMCHD1-204ENST00000581226 ZNF878C9JN71 531 aa1.96□□□□□ -2.1
SMCHD1-204ENST00000581226 DFFAO00273 331 aa1.96□□□□□ -2.1
SMCHD1-204ENST00000581226 UPK1BO75841 260 aa1.96□□□□□ -2.1
SMCHD1-204ENST00000581226 ETHE1O95571 254 aa1.96□□□□□ -2.1
SMCHD1-204ENST00000581226 GCGP01275 180 aa1.96□□□□□ -2.1
SMCHD1-204ENST00000581226 STAG3L2P0CL84 134 aa1.96□□□□□ -2.1
SMCHD1-204ENST00000581226 ACOT2P49753 483 aa1.96□□□□□ -2.1
SMCHD1-204ENST00000581226 HCCSP53701 268 aa1.96□□□□□ -2.1
SMCHD1-204ENST00000581226 MLF1P58340 268 aa1.96□□□□□ -2.1
SMCHD1-204ENST00000581226 YWHAEP62258 255 aaKnown RBP1.96□□□□□ -2.1
SMCHD1-204ENST00000581226 MAPRE2Q15555 327 aa1.96□□□□□ -2.1
SMCHD1-204ENST00000581226 HNRNPA1L2Q32P51 320 aaKnown RBP1.96□□□□□ -2.1
SMCHD1-204ENST00000581226 PYDC2Q56P42 97 aa1.96□□□□□ -2.1
SMCHD1-204ENST00000581226 SLC25A25Q6KCM7 469 aa1.96□□□□□ -2.1
SMCHD1-204ENST00000581226 SMARCD3Q6STE5 483 aa1.96□□□□□ -2.1
SMCHD1-204ENST00000581226 PDPNQ86YL7 162 aa1.96□□□□□ -2.1
SMCHD1-204ENST00000581226 RNF10Q8N5U6 811 aaKnown RBP1.96□□□□□ -2.1
SMCHD1-204ENST00000581226 C20orf144Q9BQM9 153 aa1.96□□□□□ -2.1
SMCHD1-204ENST00000581226 TMEM175Q9BSA9 504 aa1.96□□□□□ -2.1
SMCHD1-204ENST00000581226 MAP1LC3CQ9BXW4 147 aa1.96□□□□□ -2.1
SMCHD1-204ENST00000581226 ASF1BQ9NVP2 202 aa1.96□□□□□ -2.1
SMCHD1-204ENST00000581226 PPIL1Q9Y3C6 166 aa1.96□□□□□ -2.1
SMCHD1-204ENST00000581226 SLC22A7Q9Y694 548 aa1.96□□□□□ -2.1
SMCHD1-204ENST00000581226 NACADO15069 1562 aa1.96□□□□□ -2.1
SMCHD1-204ENST00000581226 SETD1AO15047 1707 aaKnown RBP1.96□□□□□ -2.1
SMCHD1-204ENST00000581226 JCADQ9P266 1359 aa1.96□□□□□ -2.1
SMCHD1-204ENST00000581226 SYNRGQ9UMZ2 1314 aa1.95□□□□□ -2.1
SMCHD1-204ENST00000581226 NUP205Q92621 2012 aa1.95□□□□□ -2.1
SMCHD1-204ENST00000581226 IGHV6-1A0A0B4J1U7 121 aa1.95□□□□□ -2.1
SMCHD1-204ENST00000581226 IGHV2OR16-5A0A0B4J2B6 119 aa1.95□□□□□ -2.1
SMCHD1-204ENST00000581226 A0A0G2JMP0 313 aa1.95□□□□□ -2.1
SMCHD1-204ENST00000581226 A0A0X1KG70 313 aa1.95□□□□□ -2.1
SMCHD1-204ENST00000581226 TMEM72A0PK05 275 aa1.95□□□□□ -2.1
SMCHD1-204ENST00000581226 K7EN84 100 aa1.95□□□□□ -2.1
SMCHD1-204ENST00000581226 PLEKHA8P1O95397 391 aa1.95□□□□□ -2.1
SMCHD1-204ENST00000581226 PAX6P26367 422 aa1.95□□□□□ -2.1
SMCHD1-204ENST00000581226 FAM104BQ5XKR9 115 aa1.95□□□□□ -2.1
SMCHD1-204ENST00000581226 LINC00337Q8N6G1 96 aa1.95□□□□□ -2.1
SMCHD1-204ENST00000581226 ZNF420Q8TAQ5 688 aaPredicted RBP1.95□□□□□ -2.1
SMCHD1-204ENST00000581226 CMTM2Q8TAZ6 248 aa1.95□□□□□ -2.1
SMCHD1-204ENST00000581226 YIPF6Q96EC8 236 aa1.95□□□□□ -2.1
SMCHD1-204ENST00000581226 GAL3ST2Q9H3Q3 398 aa1.95□□□□□ -2.1
SMCHD1-204ENST00000581226 DUSP21Q9H596 190 aa1.95□□□□□ -2.1
SMCHD1-204ENST00000581226 ARMC7Q9H6L4 198 aa1.95□□□□□ -2.1
SMCHD1-204ENST00000581226 ADA2Q9NZK5 511 aa1.95□□□□□ -2.1
SMCHD1-204ENST00000581226 STX18Q9P2W9 335 aaKnown RBP1.95□□□□□ -2.1
SMCHD1-204ENST00000581226 TTC4O95801 387 aa1.94□□□□□ -2.1
SMCHD1-204ENST00000581226 P2RY2P41231 377 aa1.94□□□□□ -2.1
SMCHD1-204ENST00000581226 RGS6P49758 472 aa1.94□□□□□ -2.1
SMCHD1-204ENST00000581226 OR12D2P58182 307 aa1.94□□□□□ -2.1
SMCHD1-204ENST00000581226 RPL31P62899 125 aaKnown RBP1.94□□□□□ -2.1
SMCHD1-204ENST00000581226 GRB2P62993 217 aaKnown RBP1.94□□□□□ -2.1
SMCHD1-204ENST00000581226 SLC35B1P78383 322 aa1.94□□□□□ -2.1
SMCHD1-204ENST00000581226 ATP5G2Q06055 141 aa1.94□□□□□ -2.1
SMCHD1-204ENST00000581226 NDUFAF6Q330K2 333 aa1.94□□□□□ -2.1
SMCHD1-204ENST00000581226 CPTPQ5TA50 214 aa1.94□□□□□ -2.1
SMCHD1-204ENST00000581226 LRRC8AQ8IWT6 810 aa1.94□□□□□ -2.1
SMCHD1-204ENST00000581226 OR51A7Q8NH64 312 aa1.94□□□□□ -2.1
SMCHD1-204ENST00000581226 MITD1Q8WV92 249 aa1.94□□□□□ -2.1
SMCHD1-204ENST00000581226 Q96MT0 163 aa1.94□□□□□ -2.1
SMCHD1-204ENST00000581226 DERL3Q96Q80 235 aa1.94□□□□□ -2.1
SMCHD1-204ENST00000581226 OR2V2Q96R30 315 aa1.94□□□□□ -2.1
SMCHD1-204ENST00000581226 PKMYT1Q99640 499 aa1.94□□□□□ -2.1
SMCHD1-204ENST00000581226 ZNF649Q9BS31 505 aa1.94□□□□□ -2.1
SMCHD1-204ENST00000581226 OR2S2Q9NQN1 319 aa1.94□□□□□ -2.1
SMCHD1-204ENST00000581226 INIPQ9NRY2 104 aa1.94□□□□□ -2.1
SMCHD1-204ENST00000581226 DDIT4Q9NX09 232 aa1.94□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms