RNA–Protein interactions for RNA: ENST00000581113.6

NF1-220, Transcript of neurofibromin 1, humanhuman

TSL 5

Gene NF1, Length 1,464 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NF1-220ENST00000581113 GID4Q8IVV7 300 aa3.09□□□□□ -1.91
NF1-220ENST00000581113 FAM71AQ8IYT1 594 aa3.09□□□□□ -1.91
NF1-220ENST00000581113 CCDC71LQ8N9Z2 235 aa3.09□□□□□ -1.91
NF1-220ENST00000581113 ZSCAN4Q8NAM6 433 aaPredicted RBP3.09□□□□□ -1.91
NF1-220ENST00000581113 SFXN5Q8TD22 340 aa3.09□□□□□ -1.91
NF1-220ENST00000581113 ACTRT1Q8TDG2 376 aa3.09□□□□□ -1.91
NF1-220ENST00000581113 C2orf15Q8WU43 125 aaKnown RBP3.09□□□□□ -1.91
NF1-220ENST00000581113 PTH2Q96A98 100 aa3.09□□□□□ -1.91
NF1-220ENST00000581113 NTAN1Q96AB6 310 aa3.09□□□□□ -1.91
NF1-220ENST00000581113 DNAJC19Q96DA6 116 aa3.09□□□□□ -1.91
NF1-220ENST00000581113 SLC25A38Q96DW6 304 aa3.09□□□□□ -1.91
NF1-220ENST00000581113 YIPF6Q96EC8 236 aa3.09□□□□□ -1.91
NF1-220ENST00000581113 SGTBQ96EQ0 304 aa3.09□□□□□ -1.91
NF1-220ENST00000581113 ITCHQ96J02 903 aa3.09□□□□□ -1.91
NF1-220ENST00000581113 PRAP1Q96NZ9 151 aa3.09□□□□□ -1.91
NF1-220ENST00000581113 OXGR1Q96P68 337 aa3.09□□□□□ -1.91
NF1-220ENST00000581113 HOPXQ9BPY8 73 aaPredicted RBP3.09□□□□□ -1.91
NF1-220ENST00000581113 C19orf24Q9BVV8 132 aa3.09□□□□□ -1.91
NF1-220ENST00000581113 TMEM59Q9BXS4 323 aa3.09□□□□□ -1.91
NF1-220ENST00000581113 ZYG11BQ9C0D3 744 aa3.09□□□□□ -1.91
NF1-220ENST00000581113 ZSCAN16Q9H4T2 348 aaPredicted RBP3.09□□□□□ -1.91
NF1-220ENST00000581113 CLMPQ9H6B4 373 aa3.09□□□□□ -1.91
NF1-220ENST00000581113 NHEJ1Q9H9Q4 299 aaPredicted RBP3.09□□□□□ -1.91
NF1-220ENST00000581113 C12orf10Q9HB07 376 aa3.09□□□□□ -1.91
NF1-220ENST00000581113 ASCL3Q9NQ33 180 aa3.09□□□□□ -1.91
NF1-220ENST00000581113 BATF3Q9NR55 127 aa3.09□□□□□ -1.91
NF1-220ENST00000581113 OPN4Q9UHM6 478 aa3.09□□□□□ -1.91
NF1-220ENST00000581113 STOML2Q9UJZ1 356 aa3.09□□□□□ -1.91
NF1-220ENST00000581113 GUCA1BQ9UMX6 200 aa3.09□□□□□ -1.91
NF1-220ENST00000581113 SLC22A13Q9Y226 551 aa3.09□□□□□ -1.91
NF1-220ENST00000581113 MTCL1Q9Y4B5 1905 aaKnown RBP3.09□□□□□ -1.91
NF1-220ENST00000581113 DOCK8Q8NF50 2099 aa3.09□□□□□ -1.91
NF1-220ENST00000581113 GLYATL1P3A0A0U1RQE8 302 aa3.09□□□□□ -1.92
NF1-220ENST00000581113 GNG14A0A1W2PPG7 69 aa3.09□□□□□ -1.92
NF1-220ENST00000581113 F5H768 121 aa3.09□□□□□ -1.92
NF1-220ENST00000581113 SRP72O76094 671 aaKnown RBP3.09□□□□□ -1.92
NF1-220ENST00000581113 PTTG1O95997 202 aa3.09□□□□□ -1.92
NF1-220ENST00000581113 IGHG4P01861 327 aa3.09□□□□□ -1.92
NF1-220ENST00000581113 HMGN1P05114 100 aa3.09□□□□□ -1.92
NF1-220ENST00000581113 SERPINA5P05154 406 aa3.09□□□□□ -1.92
NF1-220ENST00000581113 LIPCP11150 499 aa3.09□□□□□ -1.92
NF1-220ENST00000581113 NQO1P15559 274 aaKnown RBP3.09□□□□□ -1.92
NF1-220ENST00000581113 ME2P23368 584 aa3.09□□□□□ -1.92
NF1-220ENST00000581113 LEPP41159 167 aa3.09□□□□□ -1.92
NF1-220ENST00000581113 DNASE1L1P49184 302 aa3.09□□□□□ -1.92
NF1-220ENST00000581113 LIM2P55344 173 aa3.09□□□□□ -1.92
NF1-220ENST00000581113 ARF6P62330 175 aa3.09□□□□□ -1.92
NF1-220ENST00000581113 SLC35B1P78383 322 aa3.09□□□□□ -1.92
NF1-220ENST00000581113 TFAMQ00059 246 aaKnown RBP3.09□□□□□ -1.92
NF1-220ENST00000581113 MLLT11Q13015 90 aaPredicted RBP3.09□□□□□ -1.92
NF1-220ENST00000581113 DYNC1I2Q13409 638 aaKnown RBP3.09□□□□□ -1.92
NF1-220ENST00000581113 TMED2Q15363 201 aa3.09□□□□□ -1.92
NF1-220ENST00000581113 GUK1Q16774 197 aa3.09□□□□□ -1.92
NF1-220ENST00000581113 CYP51A1Q16850 503 aa3.09□□□□□ -1.92
NF1-220ENST00000581113 SLC36A2Q495M3 483 aa3.09□□□□□ -1.92
NF1-220ENST00000581113 ACSM3Q53FZ2 586 aa3.09□□□□□ -1.92
NF1-220ENST00000581113 CYBRD1Q53TN4 286 aa3.09□□□□□ -1.92
NF1-220ENST00000581113 YIF1BQ5BJH7 314 aa3.09□□□□□ -1.92
NF1-220ENST00000581113 CARD16Q5EG05 197 aa3.09□□□□□ -1.92
NF1-220ENST00000581113 OR10J3Q5JRS4 329 aa3.09□□□□□ -1.92
NF1-220ENST00000581113 RIF1Q5UIP0 2472 aaKnown RBP3.09□□□□□ -1.92
NF1-220ENST00000581113 SDHAF4Q5VUM1 108 aa3.09□□□□□ -1.92
NF1-220ENST00000581113 SPESP1Q6UW49 350 aa3.09□□□□□ -1.92
NF1-220ENST00000581113 MOB1BQ7L9L4 216 aa3.09□□□□□ -1.92
NF1-220ENST00000581113 SMIM15Q7Z3B0 74 aa3.09□□□□□ -1.92
NF1-220ENST00000581113 CEND1Q8N111 149 aa3.09□□□□□ -1.92
NF1-220ENST00000581113 TMEM86AQ8N2M4 240 aa3.09□□□□□ -1.92
NF1-220ENST00000581113 PRELID2Q8N945 189 aa3.09□□□□□ -1.92
NF1-220ENST00000581113 LINC00301Q8NCQ3 95 aa3.09□□□□□ -1.92
NF1-220ENST00000581113 LFNGQ8NES3 379 aa3.09□□□□□ -1.92
NF1-220ENST00000581113 OR6K2Q8NGY2 324 aa3.09□□□□□ -1.92
NF1-220ENST00000581113 OR51A7Q8NH64 312 aa3.09□□□□□ -1.92
NF1-220ENST00000581113 OR5K2Q8NHB8 316 aa3.09□□□□□ -1.92
NF1-220ENST00000581113 LINC01006Q8NI28 216 aa3.09□□□□□ -1.92
NF1-220ENST00000581113 ZNF502Q8TBZ5 544 aa3.09□□□□□ -1.92
NF1-220ENST00000581113 SPPL2BQ8TCT7 592 aa3.09□□□□□ -1.92
NF1-220ENST00000581113 AENQ8WTP8 325 aaKnown RBP3.09□□□□□ -1.92
NF1-220ENST00000581113 C22orf15Q8WYQ4 148 aa3.09□□□□□ -1.92
NF1-220ENST00000581113 UFD1Q92890 307 aa3.09□□□□□ -1.92
NF1-220ENST00000581113 WFIKKN1Q96NZ8 548 aa3.09□□□□□ -1.92
NF1-220ENST00000581113 MS4A4EQ96PG1 132 aa3.09□□□□□ -1.92
NF1-220ENST00000581113 ARMC7Q9H6L4 198 aa3.09□□□□□ -1.92
NF1-220ENST00000581113 NIPAL2Q9H841 368 aa3.09□□□□□ -1.92
NF1-220ENST00000581113 DIABLOQ9NR28 239 aa3.09□□□□□ -1.92
NF1-220ENST00000581113 THUMPD1Q9NXG2 353 aaKnown RBP3.09□□□□□ -1.92
NF1-220ENST00000581113 BABAM2Q9NXR7 383 aa3.09□□□□□ -1.92
NF1-220ENST00000581113 EHFQ9NZC4 300 aa3.09□□□□□ -1.92
NF1-220ENST00000581113 TMEM9Q9P0T7 183 aa3.09□□□□□ -1.92
NF1-220ENST00000581113 NDRG2Q9UN36 371 aaKnown RBP3.09□□□□□ -1.92
NF1-220ENST00000581113 TFR2Q9UP52 801 aa3.09□□□□□ -1.92
NF1-220ENST00000581113 EIF3LQ9Y262 564 aaKnown RBP3.09□□□□□ -1.92
NF1-220ENST00000581113 SNX24Q9Y343 169 aa3.09□□□□□ -1.92
NF1-220ENST00000581113 GVINP1Q7Z2Y8 2422 aa3.08□□□□□ -1.92
NF1-220ENST00000581113 FAM186AA6NE01 2351 aa3.08□□□□□ -1.92
NF1-220ENST00000581113 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP3.08□□□□□ -1.92
NF1-220ENST00000581113 A0A0A6YYD5 115 aa3.08□□□□□ -1.92
NF1-220ENST00000581113 A0A1B0GVI7 797 aa3.08□□□□□ -1.92
NF1-220ENST00000581113 SLC5A10A0PJK1 596 aa3.08□□□□□ -1.92
NF1-220ENST00000581113 MYBPHLA2RUH7 354 aa3.08□□□□□ -1.92
NF1-220ENST00000581113 CCDC182A6NF36 153 aa3.08□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms