RNA–Protein interactions for RNA: ENST00000580642.2

SS18-215, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 4

Gene SS18, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-215ENST00000580642 ARL6IP1Q15041 203 aa12.99□□□□□ -0.33
SS18-215ENST00000580642 NHLRC3Q5JS37 347 aa12.99□□□□□ -0.33
SS18-215ENST00000580642 LAX1Q8IWV1 398 aa12.99□□□□□ -0.33
SS18-215ENST00000580642 FBXL14Q8N1E6 418 aa12.99□□□□□ -0.33
SS18-215ENST00000580642 ZNF611Q8N823 705 aa12.99□□□□□ -0.33
SS18-215ENST00000580642 OR5H6Q8NGV6 325 aa12.99□□□□□ -0.33
SS18-215ENST00000580642 OR51F2Q8NH61 342 aa12.99□□□□□ -0.33
SS18-215ENST00000580642 LILRB1Q8NHL6 650 aaPredicted RBP12.99□□□□□ -0.33
SS18-215ENST00000580642 SPACA5Q96QH8 159 aa12.99□□□□□ -0.33
SS18-215ENST00000580642 SOSTQ9BQB4 213 aa12.99□□□□□ -0.33
SS18-215ENST00000580642 FGF23Q9GZV9 251 aaPredicted RBP12.99□□□□□ -0.33
SS18-215ENST00000580642 PPP1R3EQ9H7J1 279 aa12.99□□□□□ -0.33
SS18-215ENST00000580642 DIABLOQ9NR28 239 aa12.99□□□□□ -0.33
SS18-215ENST00000580642 CADP27708 2225 aa12.98□□□□□ -0.33
SS18-215ENST00000580642 RELNP78509 3460 aa12.98□□□□□ -0.33
SS18-215ENST00000580642 SPTBN1Q01082 2364 aaKnown RBP12.98□□□□□ -0.33
SS18-215ENST00000580642 FAM90A10PA6NDY2 464 aa12.98□□□□□ -0.33
SS18-215ENST00000580642 FAM90A18PA6NE21 464 aa12.98□□□□□ -0.33
SS18-215ENST00000580642 FAM90A16PA6NEW6 464 aa12.98□□□□□ -0.33
SS18-215ENST00000580642 FABP12A6NFH5 140 aa12.98□□□□□ -0.33
SS18-215ENST00000580642 FAM90A20PA6NIJ5 464 aa12.98□□□□□ -0.33
SS18-215ENST00000580642 ZSCAN5BA6NJL1 495 aa12.98□□□□□ -0.33
SS18-215ENST00000580642 FAM90A8PA6NJQ4 464 aa12.98□□□□□ -0.33
SS18-215ENST00000580642 FAM90A7PA6NKC0 464 aa12.98□□□□□ -0.33
SS18-215ENST00000580642 C17orf100A8MU93 164 aa12.98□□□□□ -0.33
SS18-215ENST00000580642 FAM90A22PA8MWA6 464 aa12.98□□□□□ -0.33
SS18-215ENST00000580642 FAM90A12PA8MX19 464 aa12.98□□□□□ -0.33
SS18-215ENST00000580642 FAM90A5PA8MXJ8 464 aa12.98□□□□□ -0.33
SS18-215ENST00000580642 FAM90A23PA8MXZ1 464 aa12.98□□□□□ -0.33
SS18-215ENST00000580642 FAM25AB3EWG3 89 aa12.98□□□□□ -0.33
SS18-215ENST00000580642 FAM25CB3EWG5 89 aa12.98□□□□□ -0.33
SS18-215ENST00000580642 FAM25GB3EWG6 89 aa12.98□□□□□ -0.33
SS18-215ENST00000580642 CSTBP04080 98 aaKnown RBP12.98□□□□□ -0.33
SS18-215ENST00000580642 FAM90A15PP0C7V4 464 aa12.98□□□□□ -0.33
SS18-215ENST00000580642 FAM90A13PP0C7W8 464 aa12.98□□□□□ -0.33
SS18-215ENST00000580642 FAM90A14PP0C7W9 464 aa12.98□□□□□ -0.33
SS18-215ENST00000580642 FAM90A24PP0C7X0 464 aa12.98□□□□□ -0.33
SS18-215ENST00000580642 GTF2F2P13984 249 aa12.98□□□□□ -0.33
SS18-215ENST00000580642 ELK1P19419 428 aa12.98□□□□□ -0.33
SS18-215ENST00000580642 PITPNAQ00169 270 aa12.98□□□□□ -0.33
SS18-215ENST00000580642 ZNF154Q13106 437 aa12.98□□□□□ -0.33
SS18-215ENST00000580642 RSU1Q15404 277 aa12.98□□□□□ -0.33
SS18-215ENST00000580642 TESK1Q15569 626 aa12.98□□□□□ -0.33
SS18-215ENST00000580642 SWI5Q1ZZU3 235 aa12.98□□□□□ -0.33
SS18-215ENST00000580642 HAGHLQ6PII5 290 aaPredicted RBP12.98□□□□□ -0.33
SS18-215ENST00000580642 CALHM1Q8IU99 346 aa12.98□□□□□ -0.33
SS18-215ENST00000580642 MUC15Q8N387 334 aa12.98□□□□□ -0.33
SS18-215ENST00000580642 OR2Z1Q8NG97 314 aa12.98□□□□□ -0.33
SS18-215ENST00000580642 OR10Z1Q8NGY1 313 aa12.98□□□□□ -0.33
SS18-215ENST00000580642 AQP3Q92482 292 aa12.98□□□□□ -0.33
SS18-215ENST00000580642 FBXW5Q969U6 566 aa12.98□□□□□ -0.33
SS18-215ENST00000580642 PHF21AQ96BD5 680 aa12.98□□□□□ -0.33
SS18-215ENST00000580642 SLC25A38Q96DW6 304 aa12.98□□□□□ -0.33
SS18-215ENST00000580642 ELMOD3Q96FG2 381 aa12.98□□□□□ -0.33
SS18-215ENST00000580642 HS3ST6Q96QI5 342 aa12.98□□□□□ -0.33
SS18-215ENST00000580642 TM2D1Q9BX74 207 aa12.98□□□□□ -0.33
SS18-215ENST00000580642 EGLN1Q9GZT9 426 aa12.98□□□□□ -0.33
SS18-215ENST00000580642 MSL2Q9HCI7 577 aa12.98□□□□□ -0.33
SS18-215ENST00000580642 MYEF2Q9P2K5 600 aaKnown RBP12.98□□□□□ -0.33
SS18-215ENST00000580642 ING4Q9UNL4 249 aa12.98□□□□□ -0.33
SS18-215ENST00000580642 UBR5O95071 2799 aaPredicted RBP12.97□□□□□ -0.33
SS18-215ENST00000580642 A0A0B4J203 849 aa12.97□□□□□ -0.33
SS18-215ENST00000580642 TRAPPC2LH3BP13 241 aa12.97□□□□□ -0.33
SS18-215ENST00000580642 IFNL4K9M1U5 179 aa12.97□□□□□ -0.33
SS18-215ENST00000580642 HS3ST1O14792 307 aa12.97□□□□□ -0.33
SS18-215ENST00000580642 XRCC3O43542 346 aa12.97□□□□□ -0.33
SS18-215ENST00000580642 CDC14BO60729 498 aa12.97□□□□□ -0.33
SS18-215ENST00000580642 TNFRSF1AP19438 455 aa12.97□□□□□ -0.33
SS18-215ENST00000580642 SNRPD2P62316 118 aaKnown RBP12.97□□□□□ -0.33
SS18-215ENST00000580642 MRPS10P82664 201 aaKnown RBP12.97□□□□□ -0.33
SS18-215ENST00000580642 MAB21L1Q13394 359 aa12.97□□□□□ -0.33
SS18-215ENST00000580642 AGAP6Q5VW22 663 aa12.97□□□□□ -0.33
SS18-215ENST00000580642 PYHIN1Q6K0P9 492 aa12.97□□□□□ -0.33
SS18-215ENST00000580642 CNIH2Q6PI25 160 aa12.97□□□□□ -0.33
SS18-215ENST00000580642 SLC25A26Q70HW3 274 aa12.97□□□□□ -0.33
SS18-215ENST00000580642 LINC00596Q86U02 117 aa12.97□□□□□ -0.33
SS18-215ENST00000580642 CMTM4Q8IZR5 234 aa12.97□□□□□ -0.33
SS18-215ENST00000580642 MFSD4AQ8N468 514 aa12.97□□□□□ -0.33
SS18-215ENST00000580642 FAM89BQ8N5H3 189 aa12.97□□□□□ -0.33
SS18-215ENST00000580642 OR56B1Q8NGI3 324 aa12.97□□□□□ -0.33
SS18-215ENST00000580642 OR5D18Q8NGL1 313 aa12.97□□□□□ -0.33
SS18-215ENST00000580642 FAM46BQ96A09 425 aa12.97□□□□□ -0.33
SS18-215ENST00000580642 RFT1Q96AA3 541 aa12.97□□□□□ -0.33
SS18-215ENST00000580642 TMEM59Q9BXS4 323 aa12.97□□□□□ -0.33
SS18-215ENST00000580642 FN3KRPQ9HA64 309 aa12.97□□□□□ -0.33
SS18-215ENST00000580642 EXTL2Q9UBQ6 330 aa12.97□□□□□ -0.33
SS18-215ENST00000580642 MYO18BQ8IUG5 2567 aa12.97□□□□□ -0.33
SS18-215ENST00000580642 F5H5P2 479 aa12.96□□□□□ -0.33
SS18-215ENST00000580642 CTDSPLO15194 276 aa12.96□□□□□ -0.33
SS18-215ENST00000580642 CTAG2O75638 210 aa12.96□□□□□ -0.33
SS18-215ENST00000580642 IGHV1-46P01743 117 aa12.96□□□□□ -0.33
SS18-215ENST00000580642 EIF4EP06730 217 aaKnown RBP12.96□□□□□ -0.33
SS18-215ENST00000580642 CPT2P23786 658 aa12.96□□□□□ -0.33
SS18-215ENST00000580642 PITPNBP48739 271 aa12.96□□□□□ -0.33
SS18-215ENST00000580642 PPOXP50336 477 aa12.96□□□□□ -0.33
SS18-215ENST00000580642 PPP5CP53041 499 aa12.96□□□□□ -0.33
SS18-215ENST00000580642 FGF12P61328 243 aa12.96□□□□□ -0.33
SS18-215ENST00000580642 RPS27AP62979 156 aaKnown RBP12.96□□□□□ -0.33
SS18-215ENST00000580642 UNC119Q13432 240 aa12.96□□□□□ -0.33
SS18-215ENST00000580642 MST1LQ2TV78 715 aa12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms