RNA–Protein interactions for RNA: ENST00000580170.5

PTPRM-211, Transcript of protein tyrosine phosphatase, receptor type M, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRM, Length 5,941 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRM-211ENST00000580170 VASH2Q86V25 355 aa19.06■□□□□ 0.64
PTPRM-211ENST00000580170 CXorf67Q86X51 503 aaPredicted RBP19.06■□□□□ 0.64
PTPRM-211ENST00000580170 TMEM230Q96A57 120 aa19.06■□□□□ 0.64
PTPRM-211ENST00000580170 FIGNL2A6NMB9 653 aa19.06■□□□□ 0.64
PTPRM-211ENST00000580170 BHLHA9Q7RTU4 235 aa19.06■□□□□ 0.64
PTPRM-211ENST00000580170 KISS1RQ969F8 398 aaPredicted RBP19.06■□□□□ 0.64
PTPRM-211ENST00000580170 ZG16BQ96DA0 208 aa19.06■□□□□ 0.64
PTPRM-211ENST00000580170 ADAT1Q9BUB4 502 aaKnown RBP19.06■□□□□ 0.64
PTPRM-211ENST00000580170 SLC35B3Q9H1N7 401 aa19.06■□□□□ 0.64
PTPRM-211ENST00000580170 ELOA3CA0A087WX78 387 aaPredicted RBP19.06■□□□□ 0.64
PTPRM-211ENST00000580170 TRGV10A0A0A0MS01 117 aa19.06■□□□□ 0.64
PTPRM-211ENST00000580170 RER1O15258 196 aa19.06■□□□□ 0.64
PTPRM-211ENST00000580170 ADAM20O43506 726 aa19.06■□□□□ 0.64
PTPRM-211ENST00000580170 SLC37A1P57057 533 aa19.06■□□□□ 0.64
PTPRM-211ENST00000580170 CD300LDQ6UXZ3 194 aa19.06■□□□□ 0.64
PTPRM-211ENST00000580170 POM121L2Q96KW2 1035 aa19.06■□□□□ 0.64
PTPRM-211ENST00000580170 SERGEFQ9UGK8 458 aa19.06■□□□□ 0.64
PTPRM-211ENST00000580170 PRSS41Q7RTY9 318 aa19.06■□□□□ 0.64
PTPRM-211ENST00000580170 HMGA2P52926 109 aa19.06■□□□□ 0.64
PTPRM-211ENST00000580170 MVDP53602 400 aa19.06■□□□□ 0.64
PTPRM-211ENST00000580170 ZNF154Q13106 437 aa19.06■□□□□ 0.64
PTPRM-211ENST00000580170 Q6ZS52 159 aa19.06■□□□□ 0.64
PTPRM-211ENST00000580170 IL22RA2Q969J5 263 aa19.06■□□□□ 0.64
PTPRM-211ENST00000580170 WDR34Q96EX3 536 aa19.06■□□□□ 0.64
PTPRM-211ENST00000580170 C17orf47Q8NEP4 570 aa19.05■□□□□ 0.64
PTPRM-211ENST00000580170 VN1R1Q9GZP7 353 aa19.05■□□□□ 0.64
PTPRM-211ENST00000580170 DGAT2L6Q6ZPD8 337 aa19.05■□□□□ 0.64
PTPRM-211ENST00000580170 ZPBPQ9BS86 351 aa19.05■□□□□ 0.64
PTPRM-211ENST00000580170 RBM38Q9H0Z9 239 aaKnown RBP19.05■□□□□ 0.64
PTPRM-211ENST00000580170 SCN7AQ01118 1682 aa19.05■□□□□ 0.64
PTPRM-211ENST00000580170 KRASP01116 189 aa19.05■□□□□ 0.64
PTPRM-211ENST00000580170 PTGFRP43088 359 aa19.05■□□□□ 0.64
PTPRM-211ENST00000580170 OR3A4PP47883 348 aa19.05■□□□□ 0.64
PTPRM-211ENST00000580170 SPICQ8N5J4 248 aa19.05■□□□□ 0.64
PTPRM-211ENST00000580170 HMGCLL1Q8TB92 370 aa19.05■□□□□ 0.64
PTPRM-211ENST00000580170 TRMT61AQ96FX7 289 aaKnown RBP19.05■□□□□ 0.64
PTPRM-211ENST00000580170 ADAMTSL3P82987 1691 aa19.05■□□□□ 0.64
PTPRM-211ENST00000580170 SHISA7A6NL88 538 aa19.05■□□□□ 0.64
PTPRM-211ENST00000580170 CEACAM6P40199 344 aa19.05■□□□□ 0.64
PTPRM-211ENST00000580170 RNASEKQ6P5S7 137 aaKnown RBP19.05■□□□□ 0.64
PTPRM-211ENST00000580170 OR10AD1Q8NGE0 317 aa19.05■□□□□ 0.64
PTPRM-211ENST00000580170 FAAP24Q9BTP7 215 aa19.05■□□□□ 0.64
PTPRM-211ENST00000580170 SPRY3O43610 288 aa19.04■□□□□ 0.64
PTPRM-211ENST00000580170 DHRS3O75911 302 aa19.04■□□□□ 0.64
PTPRM-211ENST00000580170 CDKN2AP42771 156 aaKnown RBP19.04■□□□□ 0.64
PTPRM-211ENST00000580170 RAB7AP51149 207 aa19.04■□□□□ 0.64
PTPRM-211ENST00000580170 NHLRC1Q6VVB1 395 aa19.04■□□□□ 0.64
PTPRM-211ENST00000580170 FA2HQ7L5A8 372 aa19.04■□□□□ 0.64
PTPRM-211ENST00000580170 MRGPRX3Q96LB0 322 aa19.04■□□□□ 0.64
PTPRM-211ENST00000580170 CDC14BO60729 498 aa19.04■□□□□ 0.64
PTPRM-211ENST00000580170 SPEM1Q8N4L4 309 aa19.04■□□□□ 0.64
PTPRM-211ENST00000580170 UBALD1Q8TB05 177 aa19.04■□□□□ 0.64
PTPRM-211ENST00000580170 NTNG2Q96CW9 530 aa19.04■□□□□ 0.64
PTPRM-211ENST00000580170 LRFN3Q9BTN0 628 aa19.04■□□□□ 0.64
PTPRM-211ENST00000580170 ARRDC1-AS1Q9H2J1 176 aa19.04■□□□□ 0.64
PTPRM-211ENST00000580170 DCAF16Q9NXF7 216 aa19.04■□□□□ 0.64
PTPRM-211ENST00000580170 TMED3Q9Y3Q3 217 aa19.04■□□□□ 0.64
PTPRM-211ENST00000580170 KIAA1551Q9HCM1 1747 aa19.04■□□□□ 0.64
PTPRM-211ENST00000580170 ZNF683Q8IZ20 524 aa19.04■□□□□ 0.64
PTPRM-211ENST00000580170 C17orf78Q8N4C9 275 aa19.04■□□□□ 0.64
PTPRM-211ENST00000580170 OR1C1Q15619 314 aa19.04■□□□□ 0.64
PTPRM-211ENST00000580170 OR1L3Q8NH93 324 aa19.04■□□□□ 0.64
PTPRM-211ENST00000580170 ST6GAL2Q96JF0 529 aa19.04■□□□□ 0.64
PTPRM-211ENST00000580170 TAAR9Q96RI9 348 aa19.04■□□□□ 0.64
PTPRM-211ENST00000580170 TNRC6CQ9HCJ0 1690 aaKnown RBP19.03■□□□□ 0.64
PTPRM-211ENST00000580170 M0QZK8 103 aa19.03■□□□□ 0.64
PTPRM-211ENST00000580170 M0R1X1 148 aa19.03■□□□□ 0.64
PTPRM-211ENST00000580170 MASP2O00187 686 aa19.03■□□□□ 0.64
PTPRM-211ENST00000580170 GGCTO75223 188 aaKnown RBP19.03■□□□□ 0.64
PTPRM-211ENST00000580170 FFAR4Q5NUL3 377 aa19.03■□□□□ 0.64
PTPRM-211ENST00000580170 MCHR2Q969V1 340 aa19.03■□□□□ 0.64
PTPRM-211ENST00000580170 PHYHIPLQ96FC7 376 aa19.03■□□□□ 0.64
PTPRM-211ENST00000580170 RAB32Q13637 225 aa19.03■□□□□ 0.64
PTPRM-211ENST00000580170 HLA-BQ31612 363 aa19.03■□□□□ 0.64
PTPRM-211ENST00000580170 Q6ZN92 141 aa19.03■□□□□ 0.64
PTPRM-211ENST00000580170 C6orf201Q7Z4U5 140 aa19.03■□□□□ 0.64
PTPRM-211ENST00000580170 ESRP2Q9H6T0 727 aaKnown RBP19.03■□□□□ 0.64
PTPRM-211ENST00000580170 MTCH2Q9Y6C9 303 aa19.03■□□□□ 0.64
PTPRM-211ENST00000580170 ZNF207O43670 478 aaKnown RBP19.03■□□□□ 0.64
PTPRM-211ENST00000580170 HOXB3P14651 431 aaPredicted RBP19.03■□□□□ 0.64
PTPRM-211ENST00000580170 RAG2P55895 527 aa19.03■□□□□ 0.64
PTPRM-211ENST00000580170 GNG3P63215 75 aa19.03■□□□□ 0.64
PTPRM-211ENST00000580170 RPL24P83731 157 aaKnown RBP19.03■□□□□ 0.64
PTPRM-211ENST00000580170 PLPPR2Q96GM1 343 aa19.03■□□□□ 0.64
PTPRM-211ENST00000580170 DHRS11Q6UWP2 260 aa19.03■□□□□ 0.64
PTPRM-211ENST00000580170 NAT8BQ9UHF3 227 aa19.03■□□□□ 0.64
PTPRM-211ENST00000580170 C3orf85A0A1B0GTC6 90 aa19.02■□□□□ 0.64
PTPRM-211ENST00000580170 MEGF10Q96KG7 1140 aa19.02■□□□□ 0.64
PTPRM-211ENST00000580170 LSM2Q9Y333 95 aaKnown RBP19.02■□□□□ 0.64
PTPRM-211ENST00000580170 ARID1BQ8NFD5 2236 aaPredicted RBP19.02■□□□□ 0.64
PTPRM-211ENST00000580170 ANKRD37Q7Z713 158 aa19.02■□□□□ 0.64
PTPRM-211ENST00000580170 Q8IYB0 196 aa19.02■□□□□ 0.64
PTPRM-211ENST00000580170 ZNF383Q8NA42 475 aa19.02■□□□□ 0.64
PTPRM-211ENST00000580170 BVESQ8NE79 360 aa19.02■□□□□ 0.64
PTPRM-211ENST00000580170 FAM209AQ5JX71 171 aa19.02■□□□□ 0.64
PTPRM-211ENST00000580170 THSD4Q6ZMP0 1018 aa19.02■□□□□ 0.64
PTPRM-211ENST00000580170 OR2Z1Q8NG97 314 aa19.02■□□□□ 0.64
PTPRM-211ENST00000580170 RPLP1P05386 114 aaKnown RBP19.02■□□□□ 0.64
PTPRM-211ENST00000580170 LIMS2Q7Z4I7 341 aa19.02■□□□□ 0.64
PTPRM-211ENST00000580170 OR5M9Q8NGP3 310 aa19.02■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms