RNA–Protein interactions for RNA: ENST00000577686.1

SMARCD2-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2, humanhuman

TSL 3

Gene SMARCD2, Length 394 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2-205ENST00000577686 ACTR3P61158 418 aa11.53□□□□□ -0.56
SMARCD2-205ENST00000577686 PPP1R8Q12972 351 aaKnown RBP11.53□□□□□ -0.56
SMARCD2-205ENST00000577686 CNN3Q15417 329 aaKnown RBP11.53□□□□□ -0.56
SMARCD2-205ENST00000577686 LCN8Q6JVE9 175 aa11.53□□□□□ -0.56
SMARCD2-205ENST00000577686 ACP7Q6ZNF0 438 aa11.53□□□□□ -0.56
SMARCD2-205ENST00000577686 KRT74Q7RTS7 529 aa11.53□□□□□ -0.56
SMARCD2-205ENST00000577686 IQCF1Q8N6M8 205 aa11.53□□□□□ -0.56
SMARCD2-205ENST00000577686 ASB17Q8WXJ9 295 aa11.53□□□□□ -0.56
SMARCD2-205ENST00000577686 MALSU1Q96EH3 234 aa11.53□□□□□ -0.56
SMARCD2-205ENST00000577686 LYZL4Q96KX0 146 aa11.53□□□□□ -0.56
SMARCD2-205ENST00000577686 YIPF3Q9GZM5 350 aa11.53□□□□□ -0.56
SMARCD2-205ENST00000577686 MOB1AQ9H8S9 216 aa11.53□□□□□ -0.56
SMARCD2-205ENST00000577686 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP11.53□□□□□ -0.56
SMARCD2-205ENST00000577686 ZKSCAN7Q9P0L1 754 aaPredicted RBP11.53□□□□□ -0.56
SMARCD2-205ENST00000577686 TCF19Q9Y242 345 aa11.53□□□□□ -0.56
SMARCD2-205ENST00000577686 NRASP01111 189 aa11.52□□□□□ -0.57
SMARCD2-205ENST00000577686 RAP2AP10114 183 aa11.52□□□□□ -0.57
SMARCD2-205ENST00000577686 ATP6V1B2P21281 511 aa11.52□□□□□ -0.57
SMARCD2-205ENST00000577686 OR12D2P58182 307 aa11.52□□□□□ -0.57
SMARCD2-205ENST00000577686 HIST2H2BDQ6DRA6 164 aa11.52□□□□□ -0.57
SMARCD2-205ENST00000577686 CRIP3Q6Q6R5 217 aa11.52□□□□□ -0.57
SMARCD2-205ENST00000577686 Q8N2B8 174 aa11.52□□□□□ -0.57
SMARCD2-205ENST00000577686 C17orf50Q8WW18 174 aa11.52□□□□□ -0.57
SMARCD2-205ENST00000577686 CAPSLQ8WWF8 208 aa11.52□□□□□ -0.57
SMARCD2-205ENST00000577686 FEVQ99581 238 aa11.52□□□□□ -0.57
SMARCD2-205ENST00000577686 NIPSNAP1Q9BPW8 284 aa11.52□□□□□ -0.57
SMARCD2-205ENST00000577686 PIGLQ9Y2B2 252 aa11.52□□□□□ -0.57
SMARCD2-205ENST00000577686 ARL2BPQ9Y2Y0 163 aa11.52□□□□□ -0.57
SMARCD2-205ENST00000577686 MEGF11A6BM72 1044 aa11.51□□□□□ -0.57
SMARCD2-205ENST00000577686 F2RL2O00254 374 aa11.51□□□□□ -0.57
SMARCD2-205ENST00000577686 CHST1O43916 411 aa11.51□□□□□ -0.57
SMARCD2-205ENST00000577686 NOS1APO75052 506 aaPredicted RBP11.51□□□□□ -0.57
SMARCD2-205ENST00000577686 DHRS3O75911 302 aa11.51□□□□□ -0.57
SMARCD2-205ENST00000577686 CST1P01037 141 aa11.51□□□□□ -0.57
SMARCD2-205ENST00000577686 PRB2P02812 416 aaPredicted RBP11.51□□□□□ -0.57
SMARCD2-205ENST00000577686 ARG1P05089 322 aa11.51□□□□□ -0.57
SMARCD2-205ENST00000577686 CD33P20138 364 aa11.51□□□□□ -0.57
SMARCD2-205ENST00000577686 ALOX5APP20292 161 aa11.51□□□□□ -0.57
SMARCD2-205ENST00000577686 AZGP1P25311 298 aaKnown RBP11.51□□□□□ -0.57
SMARCD2-205ENST00000577686 HAAOP46952 286 aa11.51□□□□□ -0.57
SMARCD2-205ENST00000577686 ARHGDIBP52566 201 aa11.51□□□□□ -0.57
SMARCD2-205ENST00000577686 RIDAP52758 137 aaKnown RBP11.51□□□□□ -0.57
SMARCD2-205ENST00000577686 GINS1Q14691 196 aa11.51□□□□□ -0.57
SMARCD2-205ENST00000577686 CLVS2Q5SYC1 327 aa11.51□□□□□ -0.57
SMARCD2-205ENST00000577686 TMEM200BQ69YZ2 307 aa11.51□□□□□ -0.57
SMARCD2-205ENST00000577686 AJUBAQ96IF1 538 aa11.51□□□□□ -0.57
SMARCD2-205ENST00000577686 AKR1E2Q96JD6 320 aa11.51□□□□□ -0.57
SMARCD2-205ENST00000577686 PRRG3Q9BZD7 231 aa11.51□□□□□ -0.57
SMARCD2-205ENST00000577686 FGF23Q9GZV9 251 aaPredicted RBP11.51□□□□□ -0.57
SMARCD2-205ENST00000577686 PBOV1Q9GZY1 135 aa11.51□□□□□ -0.57
SMARCD2-205ENST00000577686 ZNF702PQ9H963 129 aa11.51□□□□□ -0.57
SMARCD2-205ENST00000577686 GPR84Q9NQS5 396 aa11.51□□□□□ -0.57
SMARCD2-205ENST00000577686 IKZF2Q9UKS7 526 aa11.51□□□□□ -0.57
SMARCD2-205ENST00000577686 TCRBV5S2A0A599 114 aa11.5□□□□□ -0.57
SMARCD2-205ENST00000577686 DNAJC8O75937 253 aaPredicted RBP11.5□□□□□ -0.57
SMARCD2-205ENST00000577686 CLIC3O95833 236 aa11.5□□□□□ -0.57
SMARCD2-205ENST00000577686 TK1P04183 234 aa11.5□□□□□ -0.57
SMARCD2-205ENST00000577686 PGA5P0DJD9 388 aa11.5□□□□□ -0.57
SMARCD2-205ENST00000577686 PF4V1P10720 104 aa11.5□□□□□ -0.57
SMARCD2-205ENST00000577686 CD28P10747 220 aa11.5□□□□□ -0.57
SMARCD2-205ENST00000577686 VDAC2P45880 294 aaPredicted RBP11.5□□□□□ -0.57
SMARCD2-205ENST00000577686 ESRRGP62508 458 aa11.5□□□□□ -0.57
SMARCD2-205ENST00000577686 CBX1P83916 185 aa11.5□□□□□ -0.57
SMARCD2-205ENST00000577686 DYNC1I2Q13409 638 aaKnown RBP11.5□□□□□ -0.57
SMARCD2-205ENST00000577686 IL18R1Q13478 541 aa11.5□□□□□ -0.57
SMARCD2-205ENST00000577686 TRIM25Q14258 630 aaKnown RBP11.5□□□□□ -0.57
SMARCD2-205ENST00000577686 PLA1AQ53H76 456 aa11.5□□□□□ -0.57
SMARCD2-205ENST00000577686 OXLD1Q5BKU9 147 aa11.5□□□□□ -0.57
SMARCD2-205ENST00000577686 ZNF782Q6ZMW2 699 aaPredicted RBP11.5□□□□□ -0.57
SMARCD2-205ENST00000577686 ZBTB49Q6ZSB9 765 aa11.5□□□□□ -0.57
SMARCD2-205ENST00000577686 GDPD3Q7L5L3 318 aa11.5□□□□□ -0.57
SMARCD2-205ENST00000577686 TRPM8Q7Z2W7 1104 aa11.5□□□□□ -0.57
SMARCD2-205ENST00000577686 PIGWQ7Z7B1 504 aa11.5□□□□□ -0.57
SMARCD2-205ENST00000577686 CPOQ8IVL8 374 aa11.5□□□□□ -0.57
SMARCD2-205ENST00000577686 ZNF679Q8IYX0 411 aa11.5□□□□□ -0.57
SMARCD2-205ENST00000577686 LYG1Q8N1E2 194 aa11.5□□□□□ -0.57
SMARCD2-205ENST00000577686 ASCC1Q8N9N2 400 aaKnown RBP11.5□□□□□ -0.57
SMARCD2-205ENST00000577686 OR4M1Q8NGD0 313 aa11.5□□□□□ -0.57
SMARCD2-205ENST00000577686 OR51E1Q8TCB6 317 aa11.5□□□□□ -0.57
SMARCD2-205ENST00000577686 ARL8BQ9NVJ2 186 aa11.5□□□□□ -0.57
SMARCD2-205ENST00000577686 ZNF446Q9NWS9 450 aa11.5□□□□□ -0.57
SMARCD2-205ENST00000577686 FAM206AQ9NX38 181 aa11.5□□□□□ -0.57
SMARCD2-205ENST00000577686 OR14J1Q9UGF5 321 aa11.5□□□□□ -0.57
SMARCD2-205ENST00000577686 NUFIP1Q9UHK0 495 aaKnown RBP11.5□□□□□ -0.57
SMARCD2-205ENST00000577686 GTF2A1LQ9UNN4 478 aa11.5□□□□□ -0.57
SMARCD2-205ENST00000577686 FAM90A8PA6NJQ4 464 aa11.49□□□□□ -0.57
SMARCD2-205ENST00000577686 C17orf98A8MV24 154 aa11.49□□□□□ -0.57
SMARCD2-205ENST00000577686 DLGAP1O14490 977 aa11.49□□□□□ -0.57
SMARCD2-205ENST00000577686 ZNF728P0DKX0 622 aa11.49□□□□□ -0.57
SMARCD2-205ENST00000577686 OSMP13725 252 aa11.49□□□□□ -0.57
SMARCD2-205ENST00000577686 CCL3L1P16619 93 aa11.49□□□□□ -0.57
SMARCD2-205ENST00000577686 DYNLT3P51808 116 aa11.49□□□□□ -0.57
SMARCD2-205ENST00000577686 BCL2L15Q5TBC7 163 aa11.49□□□□□ -0.57
SMARCD2-205ENST00000577686 MINOS1Q5TGZ0 78 aa11.49□□□□□ -0.57
SMARCD2-205ENST00000577686 CD177Q8N6Q3 437 aa11.49□□□□□ -0.57
SMARCD2-205ENST00000577686 PHF21AQ96BD5 680 aa11.49□□□□□ -0.57
SMARCD2-205ENST00000577686 MNTQ99583 582 aa11.49□□□□□ -0.57
SMARCD2-205ENST00000577686 CITED2Q99967 270 aaPredicted RBP11.49□□□□□ -0.57
SMARCD2-205ENST00000577686 NRIP2Q9BQI9 281 aa11.49□□□□□ -0.57
SMARCD2-205ENST00000577686 GPR61Q9BZJ8 451 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms