RNA–Protein interactions for RNA: ENST00000576713.6

NPLOC4-219, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 5

Gene NPLOC4, Length 571 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-219ENST00000576713 FAM76BQ5HYJ3 339 aa7.9□□□□□ -1.14
NPLOC4-219ENST00000576713 SFRP4Q6FHJ7 346 aaPredicted RBP7.9□□□□□ -1.14
NPLOC4-219ENST00000576713 MOB3CQ70IA8 216 aa7.9□□□□□ -1.14
NPLOC4-219ENST00000576713 DOK3Q7L591 496 aa7.9□□□□□ -1.14
NPLOC4-219ENST00000576713 CALHM1Q8IU99 346 aa7.9□□□□□ -1.14
NPLOC4-219ENST00000576713 BATF2Q8N1L9 274 aa7.9□□□□□ -1.14
NPLOC4-219ENST00000576713 FGFRL1Q8N441 504 aa7.9□□□□□ -1.14
NPLOC4-219ENST00000576713 BOLLQ8N9W6 283 aaKnown RBP7.9□□□□□ -1.14
NPLOC4-219ENST00000576713 SCCPDHQ8NBX0 429 aa7.9□□□□□ -1.14
NPLOC4-219ENST00000576713 ZNF540Q8NDQ6 660 aa7.9□□□□□ -1.14
NPLOC4-219ENST00000576713 DEFB108BQ8NET1 73 aa7.9□□□□□ -1.14
NPLOC4-219ENST00000576713 OR8S1Q8NH09 359 aa7.9□□□□□ -1.14
NPLOC4-219ENST00000576713 NPRL2Q8WTW4 380 aa7.9□□□□□ -1.14
NPLOC4-219ENST00000576713 ORAI1Q96D31 301 aa7.9□□□□□ -1.14
NPLOC4-219ENST00000576713 RNF170Q96K19 258 aa7.9□□□□□ -1.14
NPLOC4-219ENST00000576713 ZNF488Q96MN9 340 aa7.9□□□□□ -1.14
NPLOC4-219ENST00000576713 TMEM246Q9BRR3 403 aa7.9□□□□□ -1.14
NPLOC4-219ENST00000576713 SLC22A4Q9H015 551 aa7.9□□□□□ -1.14
NPLOC4-219ENST00000576713 WDR13Q9H1Z4 485 aa7.9□□□□□ -1.14
NPLOC4-219ENST00000576713 OR51I2Q9H344 312 aa7.9□□□□□ -1.14
NPLOC4-219ENST00000576713 ZNF665Q9H7R5 613 aa7.9□□□□□ -1.14
NPLOC4-219ENST00000576713 CNOT2Q9NZN8 540 aaKnown RBP7.9□□□□□ -1.14
NPLOC4-219ENST00000576713 CTSZQ9UBR2 303 aa7.9□□□□□ -1.14
NPLOC4-219ENST00000576713 ENPP5Q9UJA9 477 aa7.9□□□□□ -1.14
NPLOC4-219ENST00000576713 LSM2Q9Y333 95 aaKnown RBP7.9□□□□□ -1.14
NPLOC4-219ENST00000576713 FBN1P35555 2871 aaKnown RBP7.9□□□□□ -1.15
NPLOC4-219ENST00000576713 A0A1B0GVI7 797 aa7.89□□□□□ -1.15
NPLOC4-219ENST00000576713 PQLC2LA1A4F0 135 aa7.89□□□□□ -1.15
NPLOC4-219ENST00000576713 EFCAB10A6NFE3 127 aa7.89□□□□□ -1.15
NPLOC4-219ENST00000576713 A6NLC8 198 aa7.89□□□□□ -1.15
NPLOC4-219ENST00000576713 CEACAM18A8MTB9 384 aa7.89□□□□□ -1.15
NPLOC4-219ENST00000576713 ZNF732B4DXR9 585 aa7.89□□□□□ -1.15
NPLOC4-219ENST00000576713 SYNGR1O43759 233 aa7.89□□□□□ -1.15
NPLOC4-219ENST00000576713 NRASP01111 189 aa7.89□□□□□ -1.15
NPLOC4-219ENST00000576713 CDK1P06493 297 aa7.89□□□□□ -1.15
NPLOC4-219ENST00000576713 UBCP0CG48 685 aaKnown RBP7.89□□□□□ -1.15
NPLOC4-219ENST00000576713 ATP6V1B1P15313 513 aa7.89□□□□□ -1.15
NPLOC4-219ENST00000576713 CRHBPP24387 322 aa7.89□□□□□ -1.15
NPLOC4-219ENST00000576713 TGM4P49221 684 aa7.89□□□□□ -1.15
NPLOC4-219ENST00000576713 GMFBP60983 142 aa7.89□□□□□ -1.15
NPLOC4-219ENST00000576713 RPS11P62280 158 aaKnown RBP eCLIP7.89□□□□□ -1.15
NPLOC4-219ENST00000576713 IRF3Q14653 427 aa7.89□□□□□ -1.15
NPLOC4-219ENST00000576713 ZNF404Q494X3 552 aa7.89□□□□□ -1.15
NPLOC4-219ENST00000576713 CLVS2Q5SYC1 327 aa7.89□□□□□ -1.15
NPLOC4-219ENST00000576713 PLCXD3Q63HM9 321 aa7.89□□□□□ -1.15
NPLOC4-219ENST00000576713 IL17RELQ6ZVW7 336 aa7.89□□□□□ -1.15
NPLOC4-219ENST00000576713 ANGPTL5Q86XS5 388 aa7.89□□□□□ -1.15
NPLOC4-219ENST00000576713 FAM90A1Q86YD7 464 aa7.89□□□□□ -1.15
NPLOC4-219ENST00000576713 OR52N1Q8NH53 320 aa7.89□□□□□ -1.15
NPLOC4-219ENST00000576713 TRMT10AQ8TBZ6 339 aaKnown RBP7.89□□□□□ -1.15
NPLOC4-219ENST00000576713 LRRC29Q8WV35 223 aa7.89□□□□□ -1.15
NPLOC4-219ENST00000576713 RAB1CQ92928 201 aa7.89□□□□□ -1.15
NPLOC4-219ENST00000576713 FGGYQ96C11 551 aa7.89□□□□□ -1.15
NPLOC4-219ENST00000576713 PGLYRP3Q96LB9 341 aa7.89□□□□□ -1.15
NPLOC4-219ENST00000576713 OR5M11Q96RB7 305 aa7.89□□□□□ -1.15
NPLOC4-219ENST00000576713 NKX3-1Q99801 234 aaPredicted RBP7.89□□□□□ -1.15
NPLOC4-219ENST00000576713 GAL3ST1Q99999 423 aa7.89□□□□□ -1.15
NPLOC4-219ENST00000576713 MICU1Q9BPX6 476 aa7.89□□□□□ -1.15
NPLOC4-219ENST00000576713 RTL8AQ9BWD3 113 aa7.89□□□□□ -1.15
NPLOC4-219ENST00000576713 DUSP21Q9H596 190 aa7.89□□□□□ -1.15
NPLOC4-219ENST00000576713 FN3KRPQ9HA64 309 aa7.89□□□□□ -1.15
NPLOC4-219ENST00000576713 RNF7Q9UBF6 113 aa7.89□□□□□ -1.15
NPLOC4-219ENST00000576713 CAB39Q9Y376 341 aaPredicted RBP7.89□□□□□ -1.15
NPLOC4-219ENST00000576713 EXOSC1Q9Y3B2 195 aaKnown RBP7.89□□□□□ -1.15
NPLOC4-219ENST00000576713 PPIAL4EA0A075B759 164 aa7.88□□□□□ -1.15
NPLOC4-219ENST00000576713 TRBV2A0A0J9YWF9 115 aa7.88□□□□□ -1.15
NPLOC4-219ENST00000576713 PNMA8CA0A1B0GUJ8 204 aa7.88□□□□□ -1.15
NPLOC4-219ENST00000576713 DHRS7CA6NNS2 312 aa7.88□□□□□ -1.15
NPLOC4-219ENST00000576713 PPIAL4DF5H284 164 aa7.88□□□□□ -1.15
NPLOC4-219ENST00000576713 F8VVB4 439 aa7.88□□□□□ -1.15
NPLOC4-219ENST00000576713 F8VWA3 439 aa7.88□□□□□ -1.15
NPLOC4-219ENST00000576713 OGG1O15527 345 aa7.88□□□□□ -1.15
NPLOC4-219ENST00000576713 PHF1O43189 567 aaPredicted RBP7.88□□□□□ -1.15
NPLOC4-219ENST00000576713 AKR7A2O43488 359 aa7.88□□□□□ -1.15
NPLOC4-219ENST00000576713 PLPP2O43688 288 aa7.88□□□□□ -1.15
NPLOC4-219ENST00000576713 MTRF1O75570 445 aaKnown RBP7.88□□□□□ -1.15
NPLOC4-219ENST00000576713 TSPAN15O95858 294 aa7.88□□□□□ -1.15
NPLOC4-219ENST00000576713 TGFAP01135 160 aa7.88□□□□□ -1.15
NPLOC4-219ENST00000576713 MT-ND2P03891 347 aa7.88□□□□□ -1.15
NPLOC4-219ENST00000576713 WNT2P09544 360 aa7.88□□□□□ -1.15
NPLOC4-219ENST00000576713 PPIAL4FP0DN26 164 aa7.88□□□□□ -1.15
NPLOC4-219ENST00000576713 SELLP14151 372 aa7.88□□□□□ -1.15
NPLOC4-219ENST00000576713 GBX2P52951 348 aaPredicted RBP7.88□□□□□ -1.15
NPLOC4-219ENST00000576713 SLC3A1Q07837 685 aa7.88□□□□□ -1.15
NPLOC4-219ENST00000576713 INSL4Q14641 139 aa7.88□□□□□ -1.15
NPLOC4-219ENST00000576713 TMEM155Q4W5P6 130 aa7.88□□□□□ -1.15
NPLOC4-219ENST00000576713 TMEM244Q5VVB8 128 aa7.88□□□□□ -1.15
NPLOC4-219ENST00000576713 DMKNQ6E0U4 476 aaPredicted RBP7.88□□□□□ -1.15
NPLOC4-219ENST00000576713 ZNF841Q6ZN19 808 aa7.88□□□□□ -1.15
NPLOC4-219ENST00000576713 LHFPL2Q6ZUX7 228 aa7.88□□□□□ -1.15
NPLOC4-219ENST00000576713 KCTD8Q6ZWB6 473 aa7.88□□□□□ -1.15
NPLOC4-219ENST00000576713 STX19Q8N4C7 294 aa7.88□□□□□ -1.15
NPLOC4-219ENST00000576713 KLHL36Q8N4N3 616 aa7.88□□□□□ -1.15
NPLOC4-219ENST00000576713 ZNF676Q8N7Q3 588 aa7.88□□□□□ -1.15
NPLOC4-219ENST00000576713 NANOGP1Q8N7R0 232 aa7.88□□□□□ -1.15
NPLOC4-219ENST00000576713 LINC00482Q8N8I6 264 aa7.88□□□□□ -1.15
NPLOC4-219ENST00000576713 SPERTQ8NA61 448 aa7.88□□□□□ -1.15
NPLOC4-219ENST00000576713 OR5A2Q8NGI9 324 aa7.88□□□□□ -1.15
NPLOC4-219ENST00000576713 AQP3Q92482 292 aa7.88□□□□□ -1.15
NPLOC4-219ENST00000576713 ZNF184Q99676 751 aaPredicted RBP7.88□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms