RNA–Protein interactions for RNA: ENST00000575711.1

RPAIN-217, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 732 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-217ENST00000575711 AKR7A2O43488 359 aa11.74□□□□□ -0.53
RPAIN-217ENST00000575711 SYNGR1O43759 233 aa11.74□□□□□ -0.53
RPAIN-217ENST00000575711 ARL6IP5O75915 188 aa11.74□□□□□ -0.53
RPAIN-217ENST00000575711 FSTL3O95633 263 aa11.74□□□□□ -0.53
RPAIN-217ENST00000575711 CYB5AP00167 134 aa11.74□□□□□ -0.53
RPAIN-217ENST00000575711 LHBP01229 141 aa11.74□□□□□ -0.53
RPAIN-217ENST00000575711 EGR1P18146 543 aa11.74□□□□□ -0.53
RPAIN-217ENST00000575711 CD80P33681 288 aa11.74□□□□□ -0.53
RPAIN-217ENST00000575711 MDH2P40926 338 aaKnown RBP11.74□□□□□ -0.53
RPAIN-217ENST00000575711 GP2P55259 537 aaKnown RBP11.74□□□□□ -0.53
RPAIN-217ENST00000575711 LOXL1Q08397 574 aaPredicted RBP11.74□□□□□ -0.53
RPAIN-217ENST00000575711 ZMYND11Q15326 602 aa11.74□□□□□ -0.53
RPAIN-217ENST00000575711 KISS1Q15726 138 aa11.74□□□□□ -0.53
RPAIN-217ENST00000575711 KCNJ8Q15842 424 aa11.74□□□□□ -0.53
RPAIN-217ENST00000575711 TMEM155Q4W5P6 130 aa11.74□□□□□ -0.53
RPAIN-217ENST00000575711 DDI2Q5TDH0 399 aa11.74□□□□□ -0.53
RPAIN-217ENST00000575711 SFRP4Q6FHJ7 346 aaPredicted RBP11.74□□□□□ -0.53
RPAIN-217ENST00000575711 TMEM91Q6ZNR0 172 aa11.74□□□□□ -0.53
RPAIN-217ENST00000575711 SATL1Q86VE3 508 aa11.74□□□□□ -0.53
RPAIN-217ENST00000575711 LRRC28Q86X40 367 aaPredicted RBP11.74□□□□□ -0.53
RPAIN-217ENST00000575711 MKXQ8IYA7 352 aa11.74□□□□□ -0.53
RPAIN-217ENST00000575711 SPICQ8N5J4 248 aa11.74□□□□□ -0.53
RPAIN-217ENST00000575711 OR52N4Q8NGI2 321 aa11.74□□□□□ -0.53
RPAIN-217ENST00000575711 RFT1Q96AA3 541 aa11.74□□□□□ -0.53
RPAIN-217ENST00000575711 GPER1Q99527 375 aa11.74□□□□□ -0.53
RPAIN-217ENST00000575711 SLITRK2Q9H156 845 aa11.74□□□□□ -0.53
RPAIN-217ENST00000575711 CHD3Q12873 2000 aaKnown RBP11.74□□□□□ -0.53
RPAIN-217ENST00000575711 DYSFO75923 2080 aa11.74□□□□□ -0.53
RPAIN-217ENST00000575711 A0A096LNT2 108 aa11.73□□□□□ -0.53
RPAIN-217ENST00000575711 C3orf80F5H4A9 247 aa11.73□□□□□ -0.53
RPAIN-217ENST00000575711 WNT9BO14905 357 aa11.73□□□□□ -0.53
RPAIN-217ENST00000575711 MAS1P04201 325 aa11.73□□□□□ -0.53
RPAIN-217ENST00000575711 HEXAP06865 529 aa11.73□□□□□ -0.53
RPAIN-217ENST00000575711 UCHL1P09936 223 aa11.73□□□□□ -0.53
RPAIN-217ENST00000575711 PGA5P0DJD9 388 aa11.73□□□□□ -0.53
RPAIN-217ENST00000575711 SMIM18P0DKX4 95 aa11.73□□□□□ -0.53
RPAIN-217ENST00000575711 JUNBP17275 347 aaPredicted RBP11.73□□□□□ -0.53
RPAIN-217ENST00000575711 GALP22466 123 aa11.73□□□□□ -0.53
RPAIN-217ENST00000575711 GLRA1P23415 457 aa11.73□□□□□ -0.53
RPAIN-217ENST00000575711 GMFBP60983 142 aa11.73□□□□□ -0.53
RPAIN-217ENST00000575711 HOXA4Q00056 320 aaPredicted RBP11.73□□□□□ -0.53
RPAIN-217ENST00000575711 MICBQ29980 383 aa11.73□□□□□ -0.53
RPAIN-217ENST00000575711 ZNF404Q494X3 552 aa11.73□□□□□ -0.53
RPAIN-217ENST00000575711 FAM27D1Q5T7N8 215 aa11.73□□□□□ -0.53
RPAIN-217ENST00000575711 CD200R1LQ6Q8B3 271 aa11.73□□□□□ -0.53
RPAIN-217ENST00000575711 SLC25A26Q70HW3 274 aa11.73□□□□□ -0.53
RPAIN-217ENST00000575711 CIARTQ8N365 385 aaPredicted RBP11.73□□□□□ -0.53
RPAIN-217ENST00000575711 NKAIN3Q8N8D7 197 aa11.73□□□□□ -0.53
RPAIN-217ENST00000575711 PNLDC1Q8NA58 520 aaKnown RBP11.73□□□□□ -0.53
RPAIN-217ENST00000575711 POC1AQ8NBT0 407 aa11.73□□□□□ -0.53
RPAIN-217ENST00000575711 C19orf18Q8NEA5 215 aa11.73□□□□□ -0.53
RPAIN-217ENST00000575711 DEFB108BQ8NET1 73 aa11.73□□□□□ -0.53
RPAIN-217ENST00000575711 OR5D18Q8NGL1 313 aa11.73□□□□□ -0.53
RPAIN-217ENST00000575711 CLDND2Q8NHS1 167 aa11.73□□□□□ -0.53
RPAIN-217ENST00000575711 MRPS26Q9BYN8 205 aaKnown RBP11.73□□□□□ -0.53
RPAIN-217ENST00000575711 DNAJB11Q9UBS4 358 aa11.73□□□□□ -0.53
RPAIN-217ENST00000575711 PCDHB10Q9UN67 800 aa11.73□□□□□ -0.53
RPAIN-217ENST00000575711 TRDV1A0A1B0GX56 115 aa11.72□□□□□ -0.53
RPAIN-217ENST00000575711 MEGF11A6BM72 1044 aa11.72□□□□□ -0.53
RPAIN-217ENST00000575711 SMAD7O15105 426 aaKnown RBP11.72□□□□□ -0.53
RPAIN-217ENST00000575711 NOS1APO75052 506 aaPredicted RBP11.72□□□□□ -0.53
RPAIN-217ENST00000575711 ACAA1P09110 424 aaPredicted RBP11.72□□□□□ -0.53
RPAIN-217ENST00000575711 MUC1P15941 1255 aaPredicted RBP11.72□□□□□ -0.53
RPAIN-217ENST00000575711 CD36P16671 472 aa11.72□□□□□ -0.53
RPAIN-217ENST00000575711 SRMP19623 302 aa11.72□□□□□ -0.53
RPAIN-217ENST00000575711 ZNF93P35789 620 aaPredicted RBP11.72□□□□□ -0.53
RPAIN-217ENST00000575711 PDZK1IP1Q13113 114 aa11.72□□□□□ -0.53
RPAIN-217ENST00000575711 TEX36Q5VZQ5 186 aa11.72□□□□□ -0.53
RPAIN-217ENST00000575711 MAPK1IP1LQ8NDC0 245 aa11.72□□□□□ -0.53
RPAIN-217ENST00000575711 SLAMF9Q96A28 289 aa11.72□□□□□ -0.53
RPAIN-217ENST00000575711 TMIGD2Q96BF3 282 aa11.72□□□□□ -0.53
RPAIN-217ENST00000575711 C12orf43Q96C57 262 aaKnown RBP11.72□□□□□ -0.53
RPAIN-217ENST00000575711 RAB39BQ96DA2 213 aa11.72□□□□□ -0.53
RPAIN-217ENST00000575711 COX4I2Q96KJ9 171 aa11.72□□□□□ -0.53
RPAIN-217ENST00000575711 CEP19Q96LK0 163 aa11.72□□□□□ -0.53
RPAIN-217ENST00000575711 TMEM246Q9BRR3 403 aa11.72□□□□□ -0.53
RPAIN-217ENST00000575711 FAM192AQ9GZU8 254 aa11.72□□□□□ -0.53
RPAIN-217ENST00000575711 TMEM165Q9HC07 324 aa11.72□□□□□ -0.53
RPAIN-217ENST00000575711 EXOSC4Q9NPD3 245 aaKnown RBP11.72□□□□□ -0.53
RPAIN-217ENST00000575711 RASL12Q9NYN1 266 aa11.72□□□□□ -0.53
RPAIN-217ENST00000575711 STUB1Q9UNE7 303 aa11.72□□□□□ -0.53
RPAIN-217ENST00000575711 IGHV3OR15-7A0A075B7D8 119 aa11.71□□□□□ -0.53
RPAIN-217ENST00000575711 TRAPPC2LH3BP13 241 aa11.71□□□□□ -0.53
RPAIN-217ENST00000575711 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP11.71□□□□□ -0.53
RPAIN-217ENST00000575711 SPRY1O43609 319 aaPredicted RBP11.71□□□□□ -0.53
RPAIN-217ENST00000575711 NXPH2O95156 264 aa11.71□□□□□ -0.53
RPAIN-217ENST00000575711 TMEM225BP0DP42 221 aa11.71□□□□□ -0.53
RPAIN-217ENST00000575711 CD99P14209 185 aa11.71□□□□□ -0.53
RPAIN-217ENST00000575711 CALRP27797 417 aaKnown RBP11.71□□□□□ -0.53
RPAIN-217ENST00000575711 ZP1P60852 638 aa11.71□□□□□ -0.53
RPAIN-217ENST00000575711 SMIM21Q3B7S5 101 aa11.71□□□□□ -0.53
RPAIN-217ENST00000575711 DCDC5Q6ZRR9 648 aa11.71□□□□□ -0.53
RPAIN-217ENST00000575711 RNF144BQ7Z419 303 aa11.71□□□□□ -0.53
RPAIN-217ENST00000575711 CDH26Q8IXH8 852 aa11.71□□□□□ -0.53
RPAIN-217ENST00000575711 Q8IYB0 196 aa11.71□□□□□ -0.53
RPAIN-217ENST00000575711 SAXO1Q8IYX7 474 aa11.71□□□□□ -0.53
RPAIN-217ENST00000575711 JAGN1Q8N5M9 183 aa11.71□□□□□ -0.53
RPAIN-217ENST00000575711 ZSCAN4Q8NAM6 433 aaPredicted RBP11.71□□□□□ -0.53
RPAIN-217ENST00000575711 OR51F2Q8NH61 342 aa11.71□□□□□ -0.53
RPAIN-217ENST00000575711 TNFAIP8L1Q8WVP5 186 aa11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms