RNA–Protein interactions for RNA: ENST00000574428.5

ATPAF1-213, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 1 (best) BASIC

Gene ATPAF1, Length 1,760 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-213ENST00000574428 FAM76BQ5HYJ3 339 aa20.4■□□□□ 0.86
ATPAF1-213ENST00000574428 STEAP3Q658P3 488 aa20.4■□□□□ 0.86
ATPAF1-213ENST00000574428 OR10K1Q8NGX5 313 aa20.4■□□□□ 0.86
ATPAF1-213ENST00000574428 FAM46BQ96A09 425 aa20.4■□□□□ 0.86
ATPAF1-213ENST00000574428 DIRAS2Q96HU8 199 aa20.4■□□□□ 0.86
ATPAF1-213ENST00000574428 MRI1Q9BV20 369 aa20.4■□□□□ 0.86
ATPAF1-213ENST00000574428 DYNLRB1Q9NP97 96 aa20.4■□□□□ 0.86
ATPAF1-213ENST00000574428 IGKV1-12A0A0C4DH73 117 aa20.39■□□□□ 0.86
ATPAF1-213ENST00000574428 TMEM210A6NLX4 147 aa20.39■□□□□ 0.86
ATPAF1-213ENST00000574428 SYNGR1O43759 233 aa20.39■□□□□ 0.86
ATPAF1-213ENST00000574428 IGKV1D-12P01611 117 aa20.39■□□□□ 0.86
ATPAF1-213ENST00000574428 VSIG8P0DPA2 414 aa20.39■□□□□ 0.86
ATPAF1-213ENST00000574428 EFNB2P52799 333 aa20.39■□□□□ 0.86
ATPAF1-213ENST00000574428 SLC22A6Q4U2R8 563 aa20.39■□□□□ 0.86
ATPAF1-213ENST00000574428 SP5Q6BEB4 398 aaPredicted RBP20.39■□□□□ 0.86
ATPAF1-213ENST00000574428 BATF2Q8N1L9 274 aa20.39■□□□□ 0.86
ATPAF1-213ENST00000574428 SCCPDHQ8NBX0 429 aa20.39■□□□□ 0.86
ATPAF1-213ENST00000574428 OR2V2Q96R30 315 aa20.39■□□□□ 0.86
ATPAF1-213ENST00000574428 S100A13Q99584 98 aa20.39■□□□□ 0.86
ATPAF1-213ENST00000574428 CCDC32Q9BV29 185 aa20.39■□□□□ 0.86
ATPAF1-213ENST00000574428 ZDHHC8Q9ULC8 765 aa20.39■□□□□ 0.86
ATPAF1-213ENST00000574428 ETV7Q9Y603 341 aa20.39■□□□□ 0.86
ATPAF1-213ENST00000574428 EIF4EP06730 217 aaKnown RBP20.39■□□□□ 0.85
ATPAF1-213ENST00000574428 QRFPP83859 136 aa20.39■□□□□ 0.85
ATPAF1-213ENST00000574428 SWI5Q1ZZU3 235 aa20.39■□□□□ 0.85
ATPAF1-213ENST00000574428 FAM131AQ6UXB0 335 aa20.39■□□□□ 0.85
ATPAF1-213ENST00000574428 OR51F2Q8NH61 342 aa20.39■□□□□ 0.85
ATPAF1-213ENST00000574428 SLAMF9Q96A28 289 aa20.39■□□□□ 0.85
ATPAF1-213ENST00000574428 SLC25A38Q96DW6 304 aa20.39■□□□□ 0.85
ATPAF1-213ENST00000574428 UBTD1Q9HAC8 227 aa20.39■□□□□ 0.85
ATPAF1-213ENST00000574428 PKDREJQ9NTG1 2253 aa20.38■□□□□ 0.85
ATPAF1-213ENST00000574428 A0A1W2PP11 408 aa20.38■□□□□ 0.85
ATPAF1-213ENST00000574428 C17orf100A8MU93 164 aa20.38■□□□□ 0.85
ATPAF1-213ENST00000574428 COX6B1P14854 86 aa20.38■□□□□ 0.85
ATPAF1-213ENST00000574428 ELK1P19419 428 aa20.38■□□□□ 0.85
ATPAF1-213ENST00000574428 CD200P41217 278 aa20.38■□□□□ 0.85
ATPAF1-213ENST00000574428 TNFAIP6P98066 277 aaPredicted RBP20.38■□□□□ 0.85
ATPAF1-213ENST00000574428 UNC119Q13432 240 aa20.38■□□□□ 0.85
ATPAF1-213ENST00000574428 MPPED2Q15777 294 aa20.38■□□□□ 0.85
ATPAF1-213ENST00000574428 TMEM104Q8NE00 496 aa20.38■□□□□ 0.85
ATPAF1-213ENST00000574428 MEGF10Q96KG7 1140 aa20.38■□□□□ 0.85
ATPAF1-213ENST00000574428 SRRQ9GZT4 340 aa20.38■□□□□ 0.85
ATPAF1-213ENST00000574428 UFSP2Q9NUQ7 469 aa20.38■□□□□ 0.85
ATPAF1-213ENST00000574428 ISPDA4D126 451 aa20.37■□□□□ 0.85
ATPAF1-213ENST00000574428 J3QT63 122 aa20.37■□□□□ 0.85
ATPAF1-213ENST00000574428 CDIPTO14735 213 aa20.37■□□□□ 0.85
ATPAF1-213ENST00000574428 LDLRAD4O15165 306 aa20.37■□□□□ 0.85
ATPAF1-213ENST00000574428 RHBDL1O75783 438 aa20.37■□□□□ 0.85
ATPAF1-213ENST00000574428 UBBP0CG47 229 aa20.37■□□□□ 0.85
ATPAF1-213ENST00000574428 SERPINA2P20848 420 aa20.37■□□□□ 0.85
ATPAF1-213ENST00000574428 SCAND1P57086 179 aa20.37■□□□□ 0.85
ATPAF1-213ENST00000574428 SNRPD2P62316 118 aaKnown RBP20.37■□□□□ 0.85
ATPAF1-213ENST00000574428 MZT1Q08AG7 82 aa20.37■□□□□ 0.85
ATPAF1-213ENST00000574428 OXA1LQ15070 435 aa20.37■□□□□ 0.85
ATPAF1-213ENST00000574428 RSU1Q15404 277 aa20.37■□□□□ 0.85
ATPAF1-213ENST00000574428 UBE2NLQ5JXB2 153 aa20.37■□□□□ 0.85
ATPAF1-213ENST00000574428 ITLN1Q8WWA0 313 aa20.37■□□□□ 0.85
ATPAF1-213ENST00000574428 AQP3Q92482 292 aa20.37■□□□□ 0.85
ATPAF1-213ENST00000574428 GAL3ST1Q99999 423 aa20.37■□□□□ 0.85
ATPAF1-213ENST00000574428 LRBAP50851 2863 aa20.37■□□□□ 0.85
ATPAF1-213ENST00000574428 FABP12A6NFH5 140 aa20.36■□□□□ 0.85
ATPAF1-213ENST00000574428 A6NLC8 198 aa20.36■□□□□ 0.85
ATPAF1-213ENST00000574428 GOSR1O95249 250 aa20.36■□□□□ 0.85
ATPAF1-213ENST00000574428 TNFSF4P23510 183 aa20.36■□□□□ 0.85
ATPAF1-213ENST00000574428 MPZP25189 248 aa20.36■□□□□ 0.85
ATPAF1-213ENST00000574428 CAPZA1P52907 286 aa20.36■□□□□ 0.85
ATPAF1-213ENST00000574428 TRIM16LQ309B1 348 aa20.36■□□□□ 0.85
ATPAF1-213ENST00000574428 CNIH2Q6PI25 160 aa20.36■□□□□ 0.85
ATPAF1-213ENST00000574428 ASCL4Q6XD76 172 aa20.36■□□□□ 0.85
ATPAF1-213ENST00000574428 ZSCAN4Q8NAM6 433 aaPredicted RBP20.36■□□□□ 0.85
ATPAF1-213ENST00000574428 PXT1Q8NFP0 134 aa20.36■□□□□ 0.85
ATPAF1-213ENST00000574428 COX4I2Q96KJ9 171 aa20.36■□□□□ 0.85
ATPAF1-213ENST00000574428 PKIBQ9C010 78 aa20.36■□□□□ 0.85
ATPAF1-213ENST00000574428 METTL9Q9H1A3 318 aa20.36■□□□□ 0.85
ATPAF1-213ENST00000574428 BANF2Q9H503 90 aa20.36■□□□□ 0.85
ATPAF1-213ENST00000574428 FAIMQ9NVQ4 179 aa20.36■□□□□ 0.85
ATPAF1-213ENST00000574428 GHRLQ9UBU3 117 aa20.36■□□□□ 0.85
ATPAF1-213ENST00000574428 HELZ2Q9BYK8 2649 aaKnown RBP20.36■□□□□ 0.85
ATPAF1-213ENST00000574428 FAM221AA4D161 298 aa20.36■□□□□ 0.85
ATPAF1-213ENST00000574428 TMEM14DPA8MWL7 114 aa20.36■□□□□ 0.85
ATPAF1-213ENST00000574428 FAM25AB3EWG3 89 aa20.36■□□□□ 0.85
ATPAF1-213ENST00000574428 FAM25CB3EWG5 89 aa20.36■□□□□ 0.85
ATPAF1-213ENST00000574428 FAM25GB3EWG6 89 aa20.36■□□□□ 0.85
ATPAF1-213ENST00000574428 CTAG2O75638 210 aa20.36■□□□□ 0.85
ATPAF1-213ENST00000574428 CRTAPO75718 401 aaPredicted RBP20.36■□□□□ 0.85
ATPAF1-213ENST00000574428 SOD3P08294 240 aa20.36■□□□□ 0.85
ATPAF1-213ENST00000574428 RBMXP38159 391 aaKnown RBP20.36■□□□□ 0.85
ATPAF1-213ENST00000574428 CCL8P80075 99 aa20.36■□□□□ 0.85
ATPAF1-213ENST00000574428 IL24Q13007 206 aa20.36■□□□□ 0.85
ATPAF1-213ENST00000574428 MADCAM1Q13477 382 aa20.36■□□□□ 0.85
ATPAF1-213ENST00000574428 ZNF826PQ6ZT77 177 aa20.36■□□□□ 0.85
ATPAF1-213ENST00000574428 C11orf53Q8IXP5 236 aa20.36■□□□□ 0.85
ATPAF1-213ENST00000574428 DTX3Q8N9I9 347 aa20.36■□□□□ 0.85
ATPAF1-213ENST00000574428 ZNF488Q96MN9 340 aa20.36■□□□□ 0.85
ATPAF1-213ENST00000574428 TLNRD1Q9H1K6 362 aa20.36■□□□□ 0.85
ATPAF1-213ENST00000574428 RHBDL2Q9NX52 303 aa20.36■□□□□ 0.85
ATPAF1-213ENST00000574428 MTCH1Q9NZJ7 389 aa20.36■□□□□ 0.85
ATPAF1-213ENST00000574428 C3orf80F5H4A9 247 aa20.35■□□□□ 0.85
ATPAF1-213ENST00000574428 CYB5AP00167 134 aa20.35■□□□□ 0.85
ATPAF1-213ENST00000574428 SFTPBP07988 381 aa20.35■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms