RNA–Protein interactions for RNA: ENST00000570273.5

HERPUD1-219, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 1 (best)

Gene HERPUD1, Length 1,425 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-219ENST00000570273 GHRLQ9UBU3 117 aa13.07□□□□□ -0.32
HERPUD1-219ENST00000570273 FBXO9Q9UK97 447 aaPredicted RBP13.07□□□□□ -0.32
HERPUD1-219ENST00000570273 SPATA2Q9UM82 520 aa13.07□□□□□ -0.32
HERPUD1-219ENST00000570273 PEX16Q9Y5Y5 336 aa13.07□□□□□ -0.32
HERPUD1-219ENST00000570273 CRYBG3Q68DQ2 2970 aa13.07□□□□□ -0.32
HERPUD1-219ENST00000570273 TMEM272A0A1B0GTI8 110 aa13.06□□□□□ -0.32
HERPUD1-219ENST00000570273 CTDSP2O14595 271 aa13.06□□□□□ -0.32
HERPUD1-219ENST00000570273 CDIPTO14735 213 aa13.06□□□□□ -0.32
HERPUD1-219ENST00000570273 HPGDSO60760 199 aa13.06□□□□□ -0.32
HERPUD1-219ENST00000570273 CD55P08174 381 aa13.06□□□□□ -0.32
HERPUD1-219ENST00000570273 SOD3P08294 240 aa13.06□□□□□ -0.32
HERPUD1-219ENST00000570273 DANCRP0C864 163 aa13.06□□□□□ -0.32
HERPUD1-219ENST00000570273 MPZP25189 248 aa13.06□□□□□ -0.32
HERPUD1-219ENST00000570273 COL8A1P27658 744 aa13.06□□□□□ -0.32
HERPUD1-219ENST00000570273 S100A5P33763 92 aa13.06□□□□□ -0.32
HERPUD1-219ENST00000570273 PPOXP50336 477 aa13.06□□□□□ -0.32
HERPUD1-219ENST00000570273 BMXP51813 675 aa13.06□□□□□ -0.32
HERPUD1-219ENST00000570273 SCAND1P57086 179 aa13.06□□□□□ -0.32
HERPUD1-219ENST00000570273 IL24Q13007 206 aa13.06□□□□□ -0.32
HERPUD1-219ENST00000570273 RSU1Q15404 277 aa13.06□□□□□ -0.32
HERPUD1-219ENST00000570273 PCGF3Q3KNV8 242 aa13.06□□□□□ -0.32
HERPUD1-219ENST00000570273 C2orf76Q3KRA6 126 aa13.06□□□□□ -0.32
HERPUD1-219ENST00000570273 SLC22A6Q4U2R8 563 aa13.06□□□□□ -0.32
HERPUD1-219ENST00000570273 FAM76BQ5HYJ3 339 aa13.06□□□□□ -0.32
HERPUD1-219ENST00000570273 FAM209AQ5JX71 171 aa13.06□□□□□ -0.32
HERPUD1-219ENST00000570273 OR10K2Q6IF99 312 aa13.06□□□□□ -0.32
HERPUD1-219ENST00000570273 C11orf71Q6IPW1 123 aa13.06□□□□□ -0.32
HERPUD1-219ENST00000570273 LAX1Q8IWV1 398 aa13.06□□□□□ -0.32
HERPUD1-219ENST00000570273 SAXO1Q8IYX7 474 aa13.06□□□□□ -0.32
HERPUD1-219ENST00000570273 ZCCHC24Q8N2G6 241 aaKnown RBP13.06□□□□□ -0.32
HERPUD1-219ENST00000570273 OR51F2Q8NH61 342 aa13.06□□□□□ -0.32
HERPUD1-219ENST00000570273 FAM46BQ96A09 425 aa13.06□□□□□ -0.32
HERPUD1-219ENST00000570273 C1orf147Q96MC9 270 aaPredicted RBP13.06□□□□□ -0.32
HERPUD1-219ENST00000570273 TRAF4Q9BUZ4 470 aaPredicted RBP13.06□□□□□ -0.32
HERPUD1-219ENST00000570273 EGLN1Q9GZT9 426 aa13.06□□□□□ -0.32
HERPUD1-219ENST00000570273 TLNRD1Q9H1K6 362 aa13.06□□□□□ -0.32
HERPUD1-219ENST00000570273 FN3KRPQ9HA64 309 aa13.06□□□□□ -0.32
HERPUD1-219ENST00000570273 C1orf123Q9NWV4 160 aa13.06□□□□□ -0.32
HERPUD1-219ENST00000570273 IL19Q9UHD0 177 aa13.06□□□□□ -0.32
HERPUD1-219ENST00000570273 ADAM30Q9UKF2 790 aa13.06□□□□□ -0.32
HERPUD1-219ENST00000570273 POLDIP2Q9Y2S7 368 aa13.06□□□□□ -0.32
HERPUD1-219ENST00000570273 PKDREJQ9NTG1 2253 aa13.06□□□□□ -0.32
HERPUD1-219ENST00000570273 IGKV1-12A0A0C4DH73 117 aa13.05□□□□□ -0.32
HERPUD1-219ENST00000570273 hCG_1807616A0A1W2PRN6 198 aa13.05□□□□□ -0.32
HERPUD1-219ENST00000570273 CRTAPO75718 401 aaPredicted RBP13.05□□□□□ -0.32
HERPUD1-219ENST00000570273 PTBP3O95758 552 aaKnown RBP13.05□□□□□ -0.32
HERPUD1-219ENST00000570273 IGKV1D-12P01611 117 aa13.05□□□□□ -0.32
HERPUD1-219ENST00000570273 VSIG8P0DPA2 414 aa13.05□□□□□ -0.32
HERPUD1-219ENST00000570273 BMP4P12644 408 aa13.05□□□□□ -0.32
HERPUD1-219ENST00000570273 SERPINA2P20848 420 aa13.05□□□□□ -0.32
HERPUD1-219ENST00000570273 CCL8P80075 99 aa13.05□□□□□ -0.32
HERPUD1-219ENST00000570273 PLA2G7Q13093 441 aa13.05□□□□□ -0.32
HERPUD1-219ENST00000570273 TESK1Q15569 626 aa13.05□□□□□ -0.32
HERPUD1-219ENST00000570273 MPPED2Q15777 294 aa13.05□□□□□ -0.32
HERPUD1-219ENST00000570273 SPRNQ5BIV9 151 aa13.05□□□□□ -0.32
HERPUD1-219ENST00000570273 UBE2NLQ5JXB2 153 aa13.05□□□□□ -0.32
HERPUD1-219ENST00000570273 OR2W3Q7Z3T1 314 aa13.05□□□□□ -0.32
HERPUD1-219ENST00000570273 MOGAT3Q86VF5 341 aa13.05□□□□□ -0.32
HERPUD1-219ENST00000570273 BATF2Q8N1L9 274 aa13.05□□□□□ -0.32
HERPUD1-219ENST00000570273 OR6Q1Q8NGQ2 317 aa13.05□□□□□ -0.32
HERPUD1-219ENST00000570273 CEP19Q96LK0 163 aa13.05□□□□□ -0.32
HERPUD1-219ENST00000570273 VRK1Q99986 396 aaPredicted RBP13.05□□□□□ -0.32
HERPUD1-219ENST00000570273 CST11Q9H112 138 aa13.05□□□□□ -0.32
HERPUD1-219ENST00000570273 SAP30LQ9HAJ7 183 aa13.05□□□□□ -0.32
HERPUD1-219ENST00000570273 DECR2Q9NUI1 292 aa13.05□□□□□ -0.32
HERPUD1-219ENST00000570273 IL36GQ9NZH8 169 aa13.05□□□□□ -0.32
HERPUD1-219ENST00000570273 LAMP3Q9UQV4 416 aa13.05□□□□□ -0.32
HERPUD1-219ENST00000570273 FLNBO75369 2602 aaKnown RBP13.05□□□□□ -0.32
HERPUD1-219ENST00000570273 FAM25AB3EWG3 89 aa13.05□□□□□ -0.32
HERPUD1-219ENST00000570273 FAM25CB3EWG5 89 aa13.05□□□□□ -0.32
HERPUD1-219ENST00000570273 FAM25GB3EWG6 89 aa13.05□□□□□ -0.32
HERPUD1-219ENST00000570273 TRAPPC2LH3BP13 241 aa13.05□□□□□ -0.32
HERPUD1-219ENST00000570273 LDLRAD4O15165 306 aa13.05□□□□□ -0.32
HERPUD1-219ENST00000570273 RHBDL1O75783 438 aa13.05□□□□□ -0.32
HERPUD1-219ENST00000570273 KDM4BO94953 1096 aa13.05□□□□□ -0.32
HERPUD1-219ENST00000570273 HTR3BO95264 441 aa13.05□□□□□ -0.32
HERPUD1-219ENST00000570273 MPIG6BO95866 241 aa13.05□□□□□ -0.32
HERPUD1-219ENST00000570273 CD8AP01732 235 aa13.05□□□□□ -0.32
HERPUD1-219ENST00000570273 CSTBP04080 98 aaKnown RBP13.05□□□□□ -0.32
HERPUD1-219ENST00000570273 TNFRSF1AP19438 455 aa13.05□□□□□ -0.32
HERPUD1-219ENST00000570273 BCL3P20749 454 aa13.05□□□□□ -0.32
HERPUD1-219ENST00000570273 QRFPP83859 136 aa13.05□□□□□ -0.32
HERPUD1-219ENST00000570273 GPR176Q14439 515 aa13.05□□□□□ -0.32
HERPUD1-219ENST00000570273 ASCL4Q6XD76 172 aa13.05□□□□□ -0.32
HERPUD1-219ENST00000570273 C20orf204Q6ZNR8 217 aa13.05□□□□□ -0.32
HERPUD1-219ENST00000570273 ZNF826PQ6ZT77 177 aa13.05□□□□□ -0.32
HERPUD1-219ENST00000570273 KCNG3Q8TAE7 436 aa13.05□□□□□ -0.32
HERPUD1-219ENST00000570273 SLC25A38Q96DW6 304 aa13.05□□□□□ -0.32
HERPUD1-219ENST00000570273 ZNF488Q96MN9 340 aa13.05□□□□□ -0.32
HERPUD1-219ENST00000570273 GAL3ST1Q99999 423 aa13.05□□□□□ -0.32
HERPUD1-219ENST00000570273 TMEM59Q9BXS4 323 aa13.05□□□□□ -0.32
HERPUD1-219ENST00000570273 CACNG6Q9BXT2 260 aa13.05□□□□□ -0.32
HERPUD1-219ENST00000570273 MIXL1Q9H2W2 232 aa13.05□□□□□ -0.32
HERPUD1-219ENST00000570273 BANF2Q9H503 90 aa13.05□□□□□ -0.32
HERPUD1-219ENST00000570273 RHBDL2Q9NX52 303 aa13.05□□□□□ -0.32
HERPUD1-219ENST00000570273 NBPF19A0A087WUL8 3843 aa13.04□□□□□ -0.32
HERPUD1-219ENST00000570273 A0A1W2PP11 408 aa13.04□□□□□ -0.32
HERPUD1-219ENST00000570273 TMEM14DPA8MWL7 114 aa13.04□□□□□ -0.32
HERPUD1-219ENST00000570273 CDC14BO60729 498 aa13.04□□□□□ -0.32
HERPUD1-219ENST00000570273 ZNF780AO75290 641 aaPredicted RBP13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms