RNA–Protein interactions for RNA: ENST00000569827.5

CAPN3-220, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 908 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-220ENST00000569827 VDAC2P45880 294 aaPredicted RBP9.71□□□□□ -0.86
CAPN3-220ENST00000569827 MAP2K3P46734 347 aa9.71□□□□□ -0.86
CAPN3-220ENST00000569827 BLVRAP53004 296 aa9.71□□□□□ -0.86
CAPN3-220ENST00000569827 DLX6P56179 175 aa9.71□□□□□ -0.86
CAPN3-220ENST00000569827 KRTAP10-11P60412 298 aa9.71□□□□□ -0.86
CAPN3-220ENST00000569827 EMX1Q04741 257 aaPredicted RBP9.71□□□□□ -0.86
CAPN3-220ENST00000569827 SNCBQ16143 134 aa9.71□□□□□ -0.86
CAPN3-220ENST00000569827 AANATQ16613 207 aa9.71□□□□□ -0.86
CAPN3-220ENST00000569827 MICAQ29983 383 aa9.71□□□□□ -0.86
CAPN3-220ENST00000569827 CEACAM21Q3KPI0 293 aa9.71□□□□□ -0.86
CAPN3-220ENST00000569827 C10orf99Q6UWK7 81 aa9.71□□□□□ -0.86
CAPN3-220ENST00000569827 CCDC121Q6ZUS5 278 aa9.71□□□□□ -0.86
CAPN3-220ENST00000569827 TRPM8Q7Z2W7 1104 aa9.71□□□□□ -0.86
CAPN3-220ENST00000569827 Q8N2B8 174 aa9.71□□□□□ -0.86
CAPN3-220ENST00000569827 PAPD5Q8NDF8 572 aaKnown RBP9.71□□□□□ -0.86
CAPN3-220ENST00000569827 OR10G2Q8NGC3 310 aa9.71□□□□□ -0.86
CAPN3-220ENST00000569827 ZNF671Q8TAW3 534 aa9.71□□□□□ -0.86
CAPN3-220ENST00000569827 OR51E1Q8TCB6 317 aa9.71□□□□□ -0.86
CAPN3-220ENST00000569827 DGCR6LQ9BY27 220 aa9.71□□□□□ -0.86
CAPN3-220ENST00000569827 C1orf21Q9H246 121 aa9.71□□□□□ -0.86
CAPN3-220ENST00000569827 REEP1Q9H902 201 aa9.71□□□□□ -0.86
CAPN3-220ENST00000569827 ABCB9Q9NP78 766 aa9.71□□□□□ -0.86
CAPN3-220ENST00000569827 GPR84Q9NQS5 396 aa9.71□□□□□ -0.86
CAPN3-220ENST00000569827 ABCB10Q9NRK6 738 aa9.71□□□□□ -0.86
CAPN3-220ENST00000569827 PIGLQ9Y2B2 252 aa9.71□□□□□ -0.86
CAPN3-220ENST00000569827 HILPDAQ9Y5L2 63 aa9.71□□□□□ -0.86
CAPN3-220ENST00000569827 HUWE1Q7Z6Z7 4374 aaKnown RBP9.7□□□□□ -0.86
CAPN3-220ENST00000569827 FAM90A8PA6NJQ4 464 aa9.7□□□□□ -0.86
CAPN3-220ENST00000569827 SH2D7A6NKC9 451 aaPredicted RBP9.7□□□□□ -0.86
CAPN3-220ENST00000569827 ODF3BA8MYP8 253 aa9.7□□□□□ -0.86
CAPN3-220ENST00000569827 H3BSH0 61 aa9.7□□□□□ -0.86
CAPN3-220ENST00000569827 SLC1A7O00341 560 aa9.7□□□□□ -0.86
CAPN3-220ENST00000569827 NXPH2O95156 264 aa9.7□□□□□ -0.86
CAPN3-220ENST00000569827 CD24P25063 80 aa9.7□□□□□ -0.86
CAPN3-220ENST00000569827 HOXD3P31249 432 aaPredicted RBP9.7□□□□□ -0.86
CAPN3-220ENST00000569827 MAGEA2P43356 314 aa9.7□□□□□ -0.86
CAPN3-220ENST00000569827 HAAOP46952 286 aa9.7□□□□□ -0.86
CAPN3-220ENST00000569827 RPS7P62081 194 aaKnown RBP9.7□□□□□ -0.86
CAPN3-220ENST00000569827 MFGE8Q08431 387 aaPredicted RBP9.7□□□□□ -0.86
CAPN3-220ENST00000569827 DYNC1I2Q13409 638 aaKnown RBP9.7□□□□□ -0.86
CAPN3-220ENST00000569827 SMIM21Q3B7S5 101 aa9.7□□□□□ -0.86
CAPN3-220ENST00000569827 DEFB121Q5J5C9 76 aa9.7□□□□□ -0.86
CAPN3-220ENST00000569827 LIAT1Q6ZQX7 453 aa9.7□□□□□ -0.86
CAPN3-220ENST00000569827 PLEKHG7Q6ZR37 379 aa9.7□□□□□ -0.86
CAPN3-220ENST00000569827 KRT77Q7Z794 578 aa9.7□□□□□ -0.86
CAPN3-220ENST00000569827 CPOQ8IVL8 374 aa9.7□□□□□ -0.86
CAPN3-220ENST00000569827 ASCC1Q8N9N2 400 aaKnown RBP9.7□□□□□ -0.86
CAPN3-220ENST00000569827 POC1AQ8NBT0 407 aa9.7□□□□□ -0.86
CAPN3-220ENST00000569827 RPS4Y2Q8TD47 263 aa9.7□□□□□ -0.86
CAPN3-220ENST00000569827 OR8B4Q96RC9 309 aa9.7□□□□□ -0.86
CAPN3-220ENST00000569827 TEAD3Q99594 435 aa9.7□□□□□ -0.86
CAPN3-220ENST00000569827 PRSS22Q9GZN4 317 aa9.7□□□□□ -0.86
CAPN3-220ENST00000569827 WNT10AQ9GZT5 417 aa9.7□□□□□ -0.86
CAPN3-220ENST00000569827 MUC13Q9H3R2 512 aa9.7□□□□□ -0.86
CAPN3-220ENST00000569827 FAM206AQ9NX38 181 aa9.7□□□□□ -0.86
CAPN3-220ENST00000569827 GTF2A1LQ9UNN4 478 aa9.7□□□□□ -0.86
CAPN3-220ENST00000569827 OR5B21A6NL26 309 aa9.69□□□□□ -0.86
CAPN3-220ENST00000569827 VGLL3A8MV65 326 aa9.69□□□□□ -0.86
CAPN3-220ENST00000569827 PRR23D1E9PI22 279 aaPredicted RBP9.69□□□□□ -0.86
CAPN3-220ENST00000569827 F2RL2O00254 374 aa9.69□□□□□ -0.86
CAPN3-220ENST00000569827 MAGEB4O15481 346 aaPredicted RBP9.69□□□□□ -0.86
CAPN3-220ENST00000569827 TK1P04183 234 aa9.69□□□□□ -0.86
CAPN3-220ENST00000569827 PGA5P0DJD9 388 aa9.69□□□□□ -0.86
CAPN3-220ENST00000569827 PRR23D2P0DMB1 279 aaPredicted RBP9.69□□□□□ -0.86
CAPN3-220ENST00000569827 PF4V1P10720 104 aa9.69□□□□□ -0.86
CAPN3-220ENST00000569827 PAICSP22234 425 aaKnown RBP9.69□□□□□ -0.86
CAPN3-220ENST00000569827 EDDM3BP56851 147 aa9.69□□□□□ -0.86
CAPN3-220ENST00000569827 ESRRGP62508 458 aa9.69□□□□□ -0.86
CAPN3-220ENST00000569827 COL10A1Q03692 680 aa9.69□□□□□ -0.86
CAPN3-220ENST00000569827 SLC34A1Q06495 639 aa9.69□□□□□ -0.86
CAPN3-220ENST00000569827 GINS1Q14691 196 aa9.69□□□□□ -0.86
CAPN3-220ENST00000569827 TCTEX1D4Q5JR98 221 aa9.69□□□□□ -0.86
CAPN3-220ENST00000569827 KHDC1LQ5JSQ8 128 aa9.69□□□□□ -0.86
CAPN3-220ENST00000569827 TMEM236Q5W0B7 351 aa9.69□□□□□ -0.86
CAPN3-220ENST00000569827 OR2T5Q6IEZ7 315 aa9.69□□□□□ -0.86
CAPN3-220ENST00000569827 ASRGL1Q7L266 308 aa9.69□□□□□ -0.86
CAPN3-220ENST00000569827 TCF23Q7RTU1 214 aa9.69□□□□□ -0.86
CAPN3-220ENST00000569827 TMEM179BQ7Z7N9 219 aa9.69□□□□□ -0.86
CAPN3-220ENST00000569827 HS3ST5Q8IZT8 346 aa9.69□□□□□ -0.86
CAPN3-220ENST00000569827 ZNF561Q8N587 486 aa9.69□□□□□ -0.86
CAPN3-220ENST00000569827 TPRX1Q8N7U7 411 aa9.69□□□□□ -0.86
CAPN3-220ENST00000569827 OR5AU1Q8NGC0 362 aa9.69□□□□□ -0.86
CAPN3-220ENST00000569827 OR2T29Q8NH02 315 aa9.69□□□□□ -0.86
CAPN3-220ENST00000569827 TRMT10AQ8TBZ6 339 aaKnown RBP9.69□□□□□ -0.86
CAPN3-220ENST00000569827 FEVQ99581 238 aa9.69□□□□□ -0.86
CAPN3-220ENST00000569827 PBOV1Q9GZY1 135 aa9.69□□□□□ -0.86
CAPN3-220ENST00000569827 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP9.69□□□□□ -0.86
CAPN3-220ENST00000569827 LAMP5Q9UJQ1 280 aa9.69□□□□□ -0.86
CAPN3-220ENST00000569827 COPS3Q9UNS2 423 aa9.69□□□□□ -0.86
CAPN3-220ENST00000569827 TMEM269A0A1B0GVZ9 245 aa9.68□□□□□ -0.86
CAPN3-220ENST00000569827 A0A1W2PPH5 198 aa9.68□□□□□ -0.86
CAPN3-220ENST00000569827 FAM172BPA6NC97 362 aa9.68□□□□□ -0.86
CAPN3-220ENST00000569827 C17orf98A8MV24 154 aa9.68□□□□□ -0.86
CAPN3-220ENST00000569827 F8VVB4 439 aa9.68□□□□□ -0.86
CAPN3-220ENST00000569827 F8VWA3 439 aa9.68□□□□□ -0.86
CAPN3-220ENST00000569827 J3QT63 122 aa9.68□□□□□ -0.86
CAPN3-220ENST00000569827 GSC2O15499 205 aa9.68□□□□□ -0.86
CAPN3-220ENST00000569827 NRASP01111 189 aa9.68□□□□□ -0.86
CAPN3-220ENST00000569827 PF4P02776 101 aa9.68□□□□□ -0.86
CAPN3-220ENST00000569827 SLC2A5P22732 501 aa9.68□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms