RNA–Protein interactions for RNA: ENST00000569240.5

CNOT1-216, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CNOT1, Length 7,660 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-216ENST00000569240 ZNF385BQ569K4 471 aa6.38□□□□□ -1.39
CNOT1-216ENST00000569240 OR10AD1Q8NGE0 317 aa6.38□□□□□ -1.39
CNOT1-216ENST00000569240 OR52E1Q8NGJ3 308 aa6.38□□□□□ -1.39
CNOT1-216ENST00000569240 PRSS3P2Q8NHM4 247 aa6.38□□□□□ -1.39
CNOT1-216ENST00000569240 COPS9Q8WXC6 57 aa6.38□□□□□ -1.39
CNOT1-216ENST00000569240 PIGCQ92535 297 aa6.38□□□□□ -1.39
CNOT1-216ENST00000569240 GMLQ99445 158 aa6.38□□□□□ -1.39
CNOT1-216ENST00000569240 SLC25A33Q9BSK2 321 aa6.38□□□□□ -1.39
CNOT1-216ENST00000569240 PARP12Q9H0J9 701 aaKnown RBP6.38□□□□□ -1.39
CNOT1-216ENST00000569240 SH2D2AQ9NP31 389 aa6.38□□□□□ -1.39
CNOT1-216ENST00000569240 GNG12Q9UBI6 72 aa6.38□□□□□ -1.39
CNOT1-216ENST00000569240 B9D1Q9UPM9 204 aa6.38□□□□□ -1.39
CNOT1-216ENST00000569240 A0A0B4J2E0 115 aa6.37□□□□□ -1.39
CNOT1-216ENST00000569240 A0A1B0GX12 115 aa6.37□□□□□ -1.39
CNOT1-216ENST00000569240 ZFPL1O95159 310 aa6.37□□□□□ -1.39
CNOT1-216ENST00000569240 IGF2P01344 180 aa6.37□□□□□ -1.39
CNOT1-216ENST00000569240 C1SP09871 688 aa6.37□□□□□ -1.39
CNOT1-216ENST00000569240 BCL3P20749 454 aa6.37□□□□□ -1.39
CNOT1-216ENST00000569240 HTR5AP47898 357 aa6.37□□□□□ -1.39
CNOT1-216ENST00000569240 WNT3P56703 355 aa6.37□□□□□ -1.39
CNOT1-216ENST00000569240 AESQ08117 197 aa6.37□□□□□ -1.39
CNOT1-216ENST00000569240 CLN3Q13286 438 aa6.37□□□□□ -1.39
CNOT1-216ENST00000569240 OSR2Q8N2R0 312 aa6.37□□□□□ -1.39
CNOT1-216ENST00000569240 COA4Q9NYJ1 87 aa6.37□□□□□ -1.39
CNOT1-216ENST00000569240 SLC22A13Q9Y226 551 aa6.37□□□□□ -1.39
CNOT1-216ENST00000569240 PAM16Q9Y3D7 125 aa6.37□□□□□ -1.39
CNOT1-216ENST00000569240 A0A087WUJ7 227 aa6.37□□□□□ -1.39
CNOT1-216ENST00000569240 A0A1B0GW64 132 aa6.37□□□□□ -1.39
CNOT1-216ENST00000569240 MPPED1O15442 326 aa6.37□□□□□ -1.39
CNOT1-216ENST00000569240 CCL16O15467 120 aa6.37□□□□□ -1.39
CNOT1-216ENST00000569240 CD74P04233 296 aa6.37□□□□□ -1.39
CNOT1-216ENST00000569240 P2RY4P51582 365 aa6.37□□□□□ -1.39
CNOT1-216ENST00000569240 NSDHLQ15738 373 aa6.37□□□□□ -1.39
CNOT1-216ENST00000569240 ZNF770Q6IQ21 691 aaPredicted RBP6.37□□□□□ -1.39
CNOT1-216ENST00000569240 OR1L3Q8NH93 324 aa6.37□□□□□ -1.39
CNOT1-216ENST00000569240 MRPL30Q8TCC3 161 aaKnown RBP6.37□□□□□ -1.39
CNOT1-216ENST00000569240 OR1A1Q9P1Q5 309 aa6.37□□□□□ -1.39
CNOT1-216ENST00000569240 TRBV23OR9-2A0A075B6M9 112 aa6.37□□□□□ -1.39
CNOT1-216ENST00000569240 C11orf97A0A1B0GVM6 126 aaPredicted RBP6.37□□□□□ -1.39
CNOT1-216ENST00000569240 IGSF23A1L1A6 192 aa6.37□□□□□ -1.39
CNOT1-216ENST00000569240 OR2J2O76002 312 aa6.37□□□□□ -1.39
CNOT1-216ENST00000569240 UTS2O95399 124 aa6.37□□□□□ -1.39
CNOT1-216ENST00000569240 ATP5IP56385 69 aaPredicted RBP6.37□□□□□ -1.39
CNOT1-216ENST00000569240 SRSF4Q08170 494 aaKnown RBP6.37□□□□□ -1.39
CNOT1-216ENST00000569240 LAMTOR1Q6IAA8 161 aa6.37□□□□□ -1.39
CNOT1-216ENST00000569240 FAAP20Q6NZ36 180 aa6.37□□□□□ -1.39
CNOT1-216ENST00000569240 OR11L1Q8NGX0 322 aa6.37□□□□□ -1.39
CNOT1-216ENST00000569240 SMIM8Q96KF7 97 aa6.37□□□□□ -1.39
CNOT1-216ENST00000569240 OR51B6Q9H340 312 aa6.37□□□□□ -1.39
CNOT1-216ENST00000569240 KIF13AQ9H1H9 1805 aa6.37□□□□□ -1.39
CNOT1-216ENST00000569240 ANKRD12Q6UB98 2062 aa6.37□□□□□ -1.39
CNOT1-216ENST00000569240 CCDC163A0A0D9SF12 145 aa6.37□□□□□ -1.39
CNOT1-216ENST00000569240 C3orf85A0A1B0GTC6 90 aa6.37□□□□□ -1.39
CNOT1-216ENST00000569240 A0A1W2PRU2 124 aa6.37□□□□□ -1.39
CNOT1-216ENST00000569240 SMPD2O60906 423 aa6.37□□□□□ -1.39
CNOT1-216ENST00000569240 TIMP2P16035 220 aa6.37□□□□□ -1.39
CNOT1-216ENST00000569240 GAGE1Q13065 139 aa6.37□□□□□ -1.39
CNOT1-216ENST00000569240 SHBQ15464 509 aa6.37□□□□□ -1.39
CNOT1-216ENST00000569240 LINC01559Q495D7 138 aa6.37□□□□□ -1.39
CNOT1-216ENST00000569240 UBALD1Q8TB05 177 aa6.37□□□□□ -1.39
CNOT1-216ENST00000569240 CNTD2Q9H8S5 307 aa6.37□□□□□ -1.39
CNOT1-216ENST00000569240 MYH9P35579 1960 aaKnown RBP6.37□□□□□ -1.39
CNOT1-216ENST00000569240 LAMA4Q16363 1823 aa6.37□□□□□ -1.39
CNOT1-216ENST00000569240 ZNF732B4DXR9 585 aa6.37□□□□□ -1.39
CNOT1-216ENST00000569240 PRAMEF4O60810 478 aa6.37□□□□□ -1.39
CNOT1-216ENST00000569240 GJB5O95377 273 aa6.37□□□□□ -1.39
CNOT1-216ENST00000569240 TRGC2P03986 189 aa6.37□□□□□ -1.39
CNOT1-216ENST00000569240 ACAA2P42765 397 aaKnown RBP6.37□□□□□ -1.39
CNOT1-216ENST00000569240 TNFRSF9Q07011 255 aa6.37□□□□□ -1.39
CNOT1-216ENST00000569240 GAMTQ14353 236 aa6.37□□□□□ -1.39
CNOT1-216ENST00000569240 ANKRD34AQ69YU3 496 aa6.37□□□□□ -1.39
CNOT1-216ENST00000569240 C6orf201Q7Z4U5 140 aa6.37□□□□□ -1.39
CNOT1-216ENST00000569240 SLC16A11Q8NCK7 471 aa6.37□□□□□ -1.39
CNOT1-216ENST00000569240 IMMP2LQ96T52 175 aa6.37□□□□□ -1.39
CNOT1-216ENST00000569240 C11orf94C9JXX5 98 aa6.37□□□□□ -1.39
CNOT1-216ENST00000569240 TNFSF15O95150 251 aa6.37□□□□□ -1.39
CNOT1-216ENST00000569240 CXorf1O96002 111 aa6.37□□□□□ -1.39
CNOT1-216ENST00000569240 ZBTB25P24278 435 aa6.37□□□□□ -1.39
CNOT1-216ENST00000569240 FOXK1P85037 733 aa6.37□□□□□ -1.39
CNOT1-216ENST00000569240 HSD11B1LQ7Z5J1 315 aa6.37□□□□□ -1.39
CNOT1-216ENST00000569240 SLC26A1Q9H2B4 701 aa6.37□□□□□ -1.39
CNOT1-216ENST00000569240 SLC7A10Q9NS82 523 aa6.37□□□□□ -1.39
CNOT1-216ENST00000569240 SLC17A4Q9Y2C5 497 aa6.37□□□□□ -1.39
CNOT1-216ENST00000569240 TIMM10BQ9Y5J6 103 aa6.37□□□□□ -1.39
CNOT1-216ENST00000569240 SOX21Q9Y651 276 aaPredicted RBP6.37□□□□□ -1.39
CNOT1-216ENST00000569240 C5P01031 1676 aa6.36□□□□□ -1.39
CNOT1-216ENST00000569240 DHRS7CA6NNS2 312 aa6.36□□□□□ -1.39
CNOT1-216ENST00000569240 TMEM176BQ3YBM2 270 aaPredicted RBP6.36□□□□□ -1.39
CNOT1-216ENST00000569240 LINC00596Q86U02 117 aa6.36□□□□□ -1.39
CNOT1-216ENST00000569240 C20orf196Q8IYI0 205 aa6.36□□□□□ -1.39
CNOT1-216ENST00000569240 MRGPRDQ8TDS7 321 aa6.36□□□□□ -1.39
CNOT1-216ENST00000569240 VN1R17PQ8TDU5 208 aa6.36□□□□□ -1.39
CNOT1-216ENST00000569240 EID2BQ96D98 161 aa6.36□□□□□ -1.39
CNOT1-216ENST00000569240 PEX11GQ96HA9 241 aa6.36□□□□□ -1.39
CNOT1-216ENST00000569240 MBNL1Q9NR56 388 aaKnown RBP6.36□□□□□ -1.39
CNOT1-216ENST00000569240 LAMB4A4D0S4 1761 aa6.36□□□□□ -1.39
CNOT1-216ENST00000569240 TRAV39A0A0B4J263 110 aa6.36□□□□□ -1.39
CNOT1-216ENST00000569240 HCRTO43612 131 aa6.36□□□□□ -1.39
CNOT1-216ENST00000569240 GLULP15104 373 aa6.36□□□□□ -1.39
CNOT1-216ENST00000569240 TNFSF10P50591 281 aa6.36□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms